CuGenDBv2

Gene ID	ClCG09G017950
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Transmembrane protein 230
Genome location	CG_Chr09:34927000..34928957
RNA-Seq Expression	ClCG09G017950
Synteny	ClCG09G017950
Gene Ontology terms	GO:0005768 - endosome (cellular component) GO:0005776 - autophagosome (cellular component) GO:0005794 - Golgi apparatus (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008590 - Transmembrane protein 230/134 IPR044234 - Transmembrane protein 230

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039453.1 transmembrane protein 230 [Cucumis melo var. makuwa]

5.7e-51

65.76

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGTDEIFCFII
        MASRRN+RYSSLA+DDND+DSEGS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLP    +F   +
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGTDEIFCFII

Query:  SLMHFFVIYFH--CRQSVFIWLLFVSEIITYNMALVCHSLVGSLNVESILNSTKKAFMRLGLHIMHGEGPMDIALHPFPITKFY
         L   F   +   C Q+    LL    +++  ++L    L      E++      AFMRL LHIMHGEGPMDIALHPFPITK +
Subjt:  SLMHFFVIYFH--CRQSVFIWLLFVSEIITYNMALVCHSLVGSLNVESILNSTKKAFMRLGLHIMHGEGPMDIALHPFPITKFY

XP_008459349.1 PREDICTED: transmembrane protein 230 [Cucumis melo]

1.7e-39

94.51

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRRN+RYSSLA+DDND+DSEGS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

XP_022961740.1 transmembrane protein 230-like [Cucurbita moschata]

2.2e-39

95.6

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRRNVRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

XP_022990725.1 transmembrane protein 230-like [Cucurbita maxima]

2.9e-39

95.6

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRR+VRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

XP_023521905.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]

7.7e-40

96.7

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRRNVRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C9X7 Transmembrane protein 230

8.3e-40

94.51

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRRN+RYSSLA+DDND+DSEGS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

A0A5A7T915 Transmembrane protein 230

2.7e-51

65.76

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGTDEIFCFII
        MASRRN+RYSSLA+DDND+DSEGS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLP    +F   +
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGTDEIFCFII

Query:  SLMHFFVIYFH--CRQSVFIWLLFVSEIITYNMALVCHSLVGSLNVESILNSTKKAFMRLGLHIMHGEGPMDIALHPFPITKFY
         L   F   +   C Q+    LL    +++  ++L    L      E++      AFMRL LHIMHGEGPMDIALHPFPITK +
Subjt:  SLMHFFVIYFH--CRQSVFIWLLFVSEIITYNMALVCHSLVGSLNVESILNSTKKAFMRLGLHIMHGEGPMDIALHPFPITKFY

A0A6J1HAY7 Transmembrane protein 230

1.1e-39

95.6

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRRNVRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

A0A6J1JQW3 Transmembrane protein 230

1.4e-39

95.6

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRR+VRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

A0A6J1K312 Transmembrane protein 230

1.6e-38

92.31

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Query:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRRNVRYSSL+TDDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Subjt:  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

SwissProt top hits

e value

%identity

Alignment

Q5BJP5 Transmembrane protein 230

4.1e-04

36.78

Show/hide

Query:  VRYSSL-ATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG
        V+YS L +TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPG
Subjt:  VRYSSL-ATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG

Q5R8X3 Transmembrane protein 230

4.1e-04

37.21

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Query:  VRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG
        V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPG
Subjt:  VRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG

Q5ZLH4 Transmembrane protein 230

1.1e-04

36.78

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Query:  VRYSSLA-TDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG
        V+YS LA TDD  +D +  +  P          KIP+K+IALA+ L ++G+ L+ +   +L G+++ G   +A  +L +G L FLPG
Subjt:  VRYSSLA-TDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG

Q8CIB6 Transmembrane protein 230

1.9e-04

37.93

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Query:  VRYSSLA-TDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG
        V+YS LA TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPG
Subjt:  VRYSSLA-TDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG

Q96A57 Transmembrane protein 230

2.4e-04

37.21

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Query:  VRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG
        V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPG
Subjt:  VRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPG

Arabidopsis top hits

e value

%identity

Alignment

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)

1.5e-25

60.42

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Query:  MASRRNVRYSSLATDDNDLD-----SEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
        MASRR+VRY+ L  D++D        E   +DPRF Y+PKAFD++PWKSIALA+FLL LG LLL LS+F+  GHM G+ SQ Y LL LG LTFLPG
Subjt:  MASRRNVRYSSLATDDNDLD-----SEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG

Sequences

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CDS sequence

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ATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACTGATGATAACGATCTTGATTCAGAGGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAA
GCTTTTGACAAGATCCCGTGGAAATCTATCGCTCTTGCTATCTTCCTCTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATG
GCGGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGTACTGATGAAATTTTCTGTTTCATAATTTCTTTAATGCATTTC
TTTGTCATTTATTTTCACTGTAGGCAAAGTGTGTTCATTTGGCTTTTGTTTGTTTCTGAAATTATTACATACAATATGGCCTTGGTGTGCCATAGCTTAGTAGGA
AGCTTGAATGTTGAAAGTATATTAAACTCCACCAAGAAAGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCA
TTCCCGATTACTAAGTTTTATCACTATGTTCATTTTGTCATTTTGGCTATAGGATATCATTGGTATGTGAACATTCTTTGCTTACACAACTTCTTTATGTATGTT
TTTCAAGTTTTGAGATGA

mRNA sequence

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Protein sequence

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MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGTDEIFCFIISLMHF
FVIYFHCRQSVFIWLLFVSEIITYNMALVCHSLVGSLNVESILNSTKKAFMRLGLHIMHGEGPMDIALHPFPITKFYHYVHFVILAIGYHWYVNILCLHNFFMYV
FQVLR

ClCG09G017950 (gene) of Watermelon (Charleston Gray) v2.5 genome