; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G019430 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G019430
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionpre-rRNA-processing protein ESF2
Genome locationCG_Chr09:36653446..36657142
RNA-Seq ExpressionClCG09G019430
SyntenyClCG09G019430
Gene Ontology termsGO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0034462 - small-subunit processome assembly (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034353 - ABT1/ESF2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039119 - ABT1/Esf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037601.1 pre-rRNA-processing protein ESF2 [Cucumis melo var. makuwa]5.5e-15990.8Show/hide
Query:  QLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQ
        +LGESNINSDSDKVKKKKKRKKSTQQ +EESSIKDEAGEYENR ETFMKE SP SN GSE  FEKR IALEDAENERTD+++RENS+ KILES+NGK D+
Subjt:  QLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQ

Query:  RNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGG
        R IKRKK+LLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGE IGG
Subjt:  RNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGG

Query:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFP
        RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIEERLKKKQKLR+DSEMNS L DSQKLPKLIRSFP
Subjt:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFP

Query:  QTQPVAHSAVQNKQRLSTNVLAGAEFSMIFKMVKSNF
        QTQPVA  AVQNKQRLSTNVLA  EFSMI KMVKS+F
Subjt:  QTQPVAHSAVQNKQRLSTNVLAGAEFSMIFKMVKSNF

XP_016902333.1 PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo]3.2e-17590.86Show/hide
Query:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE
        MSKEES EVNLTTDC+PESSKKRAK RKNKKKQLLM+GVDV EMK+V SVQLGESNINSDSDKVKKKKKRKKSTQQ +EESSIKDEAGEYENR ETFMKE
Subjt:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE

Query:  GSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIY
         SP SN GSE  FEKR IALEDAENERTD+++RE S+ KILES+NGK D+R IKRKK+LLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIY
Subjt:  GSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIY

Query:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
        LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Subjt:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER

Query:  DFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLA
        D YLAKVDKSRALNSIEERLKKKQKLR+DSEMNS L DSQKLPKLIRSFPQTQPVA  AVQNKQRLSTNVLA
Subjt:  DFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLA

XP_022990094.1 pre-rRNA-processing protein ESF2 [Cucurbita maxima]3.6e-15883.47Show/hide
Query:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE
        M KEESFEV+LTTDCSPESSKK  K  K KKKQLL+EGVDV E    GSV+LGESNINS+   VK KKKR+KST+Q V E+SI+ EAGEYE +AE  +KE
Subjt:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE

Query:  GSPFSNGGSEK--IFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQR
        GSP S+GGSEK  I E+R+ ALED ENE  DS+VRE S EKILESNNGK DQRNIKRKKRLLKE ANADMRGICYLSRVPPHMDPL+LRQILSQYGEIQR
Subjt:  GSPFSNGGSEK--IFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG
        ERDFYL+KVDKSRAL SIEERLKKKQKLR+DSEMNS LADSQKLPKLIR+FPQTQPVA SAVQ+K +LSTN LAG
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG

XP_031742023.1 pre-rRNA-processing protein ESF2 [Cucumis sativus]5.7e-17288.83Show/hide
Query:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKV---KKKKKRKKSTQQYVEESSIKDEAGEYENRAETF
        MS EES EVNL TDCSPES KKRAK RKNK+KQLL++GVDV EMK+VGSVQLGESN+N+DSDKV   KKKKKRKKSTQQ VEES IKDEAGEYENRAETF
Subjt:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKV---KKKKKRKKSTQQYVEESSIKDEAGEYENRAETF

Query:  MKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQ
        MKE SP SN GSE  FEKRKIALEDAENERTDS++RENS+ KILES+NGK +QR IKRKK+LLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQ
Subjt:  MKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQ

Query:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
        RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
Subjt:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK

Query:  RERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG
        RERDFYLAKVDKSRALNSIEERLKKKQK+R+DSEMNS L DSQKLPKLIRSFPQTQPVA  AVQNK RLSTNVLAG
Subjt:  RERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG

XP_038891142.1 pre-rRNA-processing protein ESF2 [Benincasa hispida]1.6e-18292.76Show/hide
Query:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE
        MSKEESFEV+LTTDCSP+SSKKRAKRRKNK KQLLME  D+ EMKEVGSVQLGESNIN DSDKVKKKKKRKKS QQ VEESS+KDEAGEYENRAETFMKE
Subjt:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE

Query:  GSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIY
        GS FSNGGSEK FEKRKIALEDAENER+ S+VRENS EKILESNNGKADQRNIKRKKRLLKE  NADMRGICYLSRVPPHMDPL+LRQILSQYGEIQRIY
Subjt:  GSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIY

Query:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
        LAPEDAASQVQRKR+GGFRGQFFSEGWVEFTDKRVAKKVAN+LNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Subjt:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER

Query:  DFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG
        DFYLAKVDKSRALNSIEERLKKKQKLR+DSEM S LADSQKLPKLIRSFPQTQPVA S VQNKQRLSTNVLAG
Subjt:  DFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG

TrEMBL top hitse value%identityAlignment
A0A0A0KUC2 RRM domain-containing protein2.7e-17288.83Show/hide
Query:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKV---KKKKKRKKSTQQYVEESSIKDEAGEYENRAETF
        MS EES EVNL TDCSPES KKRAK RKNK+KQLL++GVDV EMK+VGSVQLGESN+N+DSDKV   KKKKKRKKSTQQ VEES IKDEAGEYENRAETF
Subjt:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKV---KKKKKRKKSTQQYVEESSIKDEAGEYENRAETF

Query:  MKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQ
        MKE SP SN GSE  FEKRKIALEDAENERTDS++RENS+ KILES+NGK +QR IKRKK+LLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQ
Subjt:  MKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQ

Query:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
        RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
Subjt:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK

Query:  RERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG
        RERDFYLAKVDKSRALNSIEERLKKKQK+R+DSEMNS L DSQKLPKLIRSFPQTQPVA  AVQNK RLSTNVLAG
Subjt:  RERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG

A0A1S4E282 pre-rRNA-processing protein ESF21.6e-17590.86Show/hide
Query:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE
        MSKEES EVNLTTDC+PESSKKRAK RKNKKKQLLM+GVDV EMK+V SVQLGESNINSDSDKVKKKKKRKKSTQQ +EESSIKDEAGEYENR ETFMKE
Subjt:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE

Query:  GSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIY
         SP SN GSE  FEKR IALEDAENERTD+++RE S+ KILES+NGK D+R IKRKK+LLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIY
Subjt:  GSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIY

Query:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
        LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Subjt:  LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER

Query:  DFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLA
        D YLAKVDKSRALNSIEERLKKKQKLR+DSEMNS L DSQKLPKLIRSFPQTQPVA  AVQNKQRLSTNVLA
Subjt:  DFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLA

A0A5A7T7P5 Pre-rRNA-processing protein ESF22.7e-15990.8Show/hide
Query:  QLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQ
        +LGESNINSDSDKVKKKKKRKKSTQQ +EESSIKDEAGEYENR ETFMKE SP SN GSE  FEKR IALEDAENERTD+++RENS+ KILES+NGK D+
Subjt:  QLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQ

Query:  RNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGG
        R IKRKK+LLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGE IGG
Subjt:  RNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGG

Query:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFP
        RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIEERLKKKQKLR+DSEMNS L DSQKLPKLIRSFP
Subjt:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFP

Query:  QTQPVAHSAVQNKQRLSTNVLAGAEFSMIFKMVKSNF
        QTQPVA  AVQNKQRLSTNVLA  EFSMI KMVKS+F
Subjt:  QTQPVAHSAVQNKQRLSTNVLAGAEFSMIFKMVKSNF

A0A6J1BYG4 pre-rRNA-processing protein ESF23.8e-15883.47Show/hide
Query:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE
        M KEE  EVNLTTD SPESSKKRAKR KNKKKQLL EGVDV +MKEV SVQ+ ESNINSD DKVKKKKK KKS +Q VEE+SIK EAGE E++AE+ MKE
Subjt:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE

Query:  GSPFSNGGSEK--IFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQR
        G PFS+GG EK   FEK++I LE AE+ R DS+VRENS EKILESNNGK+DQR IKRKKRLLKE+A A+M GICYLSRVPPHMDPL+LRQILS YGEIQR
Subjt:  GSPFSNGGSEK--IFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAA+QVQRKRAGGFRGQ FSEGWVEFTDKRVAKKVA MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG
        ERDFYL+KVDKSRALNSIEERLKKKQKLR+DSEM+S     QKLPKLIR+FPQTQPVA SAV+NKQRLS N+LAG
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG

A0A6J1JP68 pre-rRNA-processing protein ESF21.7e-15883.47Show/hide
Query:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE
        M KEESFEV+LTTDCSPESSKK  K  K KKKQLL+EGVDV E    GSV+LGESNINS+   VK KKKR+KST+Q V E+SI+ EAGEYE +AE  +KE
Subjt:  MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKE

Query:  GSPFSNGGSEK--IFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQR
        GSP S+GGSEK  I E+R+ ALED ENE  DS+VRE S EKILESNNGK DQRNIKRKKRLLKE ANADMRGICYLSRVPPHMDPL+LRQILSQYGEIQR
Subjt:  GSPFSNGGSEK--IFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG
        ERDFYL+KVDKSRAL SIEERLKKKQKLR+DSEMNS LADSQKLPKLIR+FPQTQPVA SAVQ+K +LSTN LAG
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAG

SwissProt top hitse value%identityAlignment
O74362 Pre-rRNA-processing protein esf21.2e-3432.44Show/hide
Query:  NSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALED----AENERTDSMVRENSEEKILESNNGKADQRNI
        + + ++  K  +  +ST+  V+   +K E+      A+   +  +       +  FE      ED    +ENE  +   +  +  K       K     +
Subjt:  NSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALED----AENERTDSMVRENSEEKILESNNGKADQRNI

Query:  KRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKR
        +++++ +K +      G+ YLSR+PP+M P +LRQILSQYG+I R+YL PE +A + QR R GG +   + EGW+EF  KRVAK VA +LN  QIGG+K 
Subjt:  KRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKR

Query:  SSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEM---NSALADSQKLPKLIRSF
        S ++ D+WN+KYL KFKW  LTE+ A ++A RE +L +EI   +++   Y+  V+ ++ +  I ++  ++  L   +E       L++  K  K  R F
Subjt:  SSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEM---NSALADSQKLPKLIRSF

Q59YL9 Pre-rRNA-processing protein ESF24.0e-3535.32Show/hide
Query:  KKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEK-------RKIALEDAENERTDSMVRENSEEKILESNNGKAD-------QRNIKRK
        ++S  +  +E++ +D+    +++  +F    +  +   SE   +K        K   +D ++   D    E SEE I +  +G AD       + N K K
Subjt:  KKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEK-------RKIALEDAENERTDSMVRENSEEKILESNNGKAD-------QRNIKRK

Query:  KRLLKEAANADMR----GICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRK
        K   KE A    R    G+CYLSRVPP+M P +LR +LS++GEI R++L PED +   +R + GG + + F+EGW+EF +K  AK  A  LNG ++GG+K
Subjt:  KRLLKEAANADMR----GICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRK

Query:  RSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLK
         S +Y D+ NIKYL  FKW DLT++ A ++ +R+ KLA+EIS  ++    +++ V+KS+ + +I+++ K
Subjt:  RSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLK

Q6BSS5 Pre-rRNA-processing protein ESF21.5e-3431.8Show/hide
Query:  DEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKR--KKRLLKEAANADMRGICYLSRVPPHMD
        DE  + + +     K+ S   N  +E+  ++  +  ED +      ++ E + E     N+ +A   N+K+   ++L KE       G+CYLS++PP+M 
Subjt:  DEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKR--KKRLLKEAANADMRGICYLSRVPPHMD

Query:  PLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKH
        P +LR +LS++G+I R++L PED ++  +R + GG + + ++ GWVEF +K+ AK  A  LNG ++GG+K S +Y D+ NIKYLS FKW DLT++ A ++
Subjt:  PLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKH

Query:  AIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQR
         IR+ KL++E+S  ++    ++  V+KS+ +N+++ + K +Q        N   +D ++  K  R    T+  A   +++K +
Subjt:  AIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQR

Q6CSP8 Pre-rRNA-processing protein ESF21.3e-3335.74Show/hide
Query:  EDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRG
        E+ E E  +    E  E+K+++    + ++   +R K+L  +       G+ YLSRVPP+M P +LRQIL+++GE+ R++L  E+     QR ++GG + 
Subjt:  EDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRG

Query:  QFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERL
          F EGW EF  K+ AK  A+ LNG  IGG+K + ++ D+ N+KYL  FKW DLTE+ A ++ IR+ KL LEIS A +    ++  V+KS+ +N +++  
Subjt:  QFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERL

Query:  KKKQ--------------KLRKDSEMNSALADSQK
        K+ Q              K RK +   ++  DSQ+
Subjt:  KKKQ--------------KLRKDSEMNSALADSQK

Q6FWS2 Pre-rRNA-processing protein ESF24.8e-3333.09Show/hide
Query:  ETFMKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKK-----RLLKEAANADMR---GICYLSRVPPHMDPLRL
        + F KE S    G S++  +  +    + + E  ++ + +N  E+  E   G A+  + +++K     ++++  A   ++   G+ YLSR+PP+M P ++
Subjt:  ETFMKEGSPFSNGGSEKIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKK-----RLLKEAANADMR---GICYLSRVPPHMDPLRL

Query:  RQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIRE
        RQILS++GEI R++L  ED A   QR R GG +   + EGW EF  KR AK  A  LNG  IGG+K S ++ D+ N+KYL  FKW DLTE+ A ++ +R+
Subjt:  RQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIRE

Query:  QKLALEISAAKRERDFYLAKVDKSRALNSIEERL---KKKQKLRKDSEMNSALADSQKLPKLIRSFPQT
         KL LEIS + +    Y+  V++S+ L ++ +R     + Q  R+  + +    +    P  I++  +T
Subjt:  QKLALEISAAKRERDFYLAKVDKSRALNSIEERL---KKKQKLRKDSEMNSALADSQKLPKLIRSFPQT

Arabidopsis top hitse value%identityAlignment
AT3G56510.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.1e-7658.57Show/hide
Query:  DAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ
        +  +E TD +  E   ++ ++S   KAD++  K K++LLKEA+ AD RG+CYLSR+PPHMD +RLR IL+QYGE+ RIYLAPED+ +QV RKRAGGFRGQ
Subjt:  DAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ

Query:  FFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLK
         FSEGWVEF  K VAK+VA+MLNGEQIGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I+ R++
Subjt:  FFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLK

Query:  KKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLA
        KK+K++++S  N+  A     P+ I  F Q + + +   Q+K  LST+ LA
Subjt:  KKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLA

AT3G56510.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.1e-7658.57Show/hide
Query:  DAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ
        +  +E TD +  E   ++ ++S   KAD++  K K++LLKEA+ AD RG+CYLSR+PPHMD +RLR IL+QYGE+ RIYLAPED+ +QV RKRAGGFRGQ
Subjt:  DAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ

Query:  FFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLK
         FSEGWVEF  K VAK+VA+MLNGEQIGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I+ R++
Subjt:  FFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLK

Query:  KKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLA
        KK+K++++S  N+  A     P+ I  F Q + + +   Q+K  LST+ LA
Subjt:  KKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAGGAGGAGAGCTTTGAAGTTAATTTAACAACCGACTGCAGCCCAGAATCTAGTAAGAAAAGAGCAAAAAGAAGAAAAAACAAAAAGAAGCAGTTATTGATGGA
AGGTGTAGATGTCGCGGAAATGAAAGAGGTAGGATCCGTTCAGCTGGGGGAAAGCAACATAAACTCCGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAGAAGAGTA
CTCAACAATATGTAGAGGAGAGCTCTATCAAGGATGAGGCAGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGGCAGTCCTTTCTCTAATGGTGGAAGTGAG
AAAATTTTCGAAAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGACAGCATGGTCAGAGAAAACTCTGAAGAGAAGATTCTAGAGTCTAACAATGGAAA
AGCAGATCAAAGGAATATTAAGAGGAAGAAGCGGCTCTTAAAGGAAGCAGCAAATGCAGATATGCGTGGTATTTGTTACTTGAGCCGAGTTCCTCCACACATGGATCCTT
TGAGACTTCGTCAGATCCTCTCACAGTATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTACAACGAAAGCGTGCAGGAGGCTTTCGAGGA
CAGTTTTTTTCAGAAGGGTGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACAGATAGGAGGAAGGAAGAGGTCATCTTTTTA
CTATGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACTGAAGAAACTGCTTACAAGCATGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTT
CTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCGAAAGTGGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAAAAGATTCA
GAAATGAATTCTGCACTTGCTGATAGCCAGAAACTTCCAAAGTTGATCCGCAGCTTCCCACAAACACAACCAGTTGCACATTCTGCAGTACAAAACAAACAGAGACTATC
TACAAATGTCCTGGCTGGGGCTGAGTTCAGTATGATTTTTAAAATGGTGAAAAGTAATTTTAGGTGTTTGGAAGTTCCTAGTCGTCTATATTTTCCAACTGCTATTAATC
GAAGAGAATTTAAGACAAGGGATTTGCTATCCAGAGACTTGGGCTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAGGAGGAGAGCTTTGAAGTTAATTTAACAACCGACTGCAGCCCAGAATCTAGTAAGAAAAGAGCAAAAAGAAGAAAAAACAAAAAGAAGCAGTTATTGATGGA
AGGTGTAGATGTCGCGGAAATGAAAGAGGTAGGATCCGTTCAGCTGGGGGAAAGCAACATAAACTCCGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAGAAGAGTA
CTCAACAATATGTAGAGGAGAGCTCTATCAAGGATGAGGCAGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGGCAGTCCTTTCTCTAATGGTGGAAGTGAG
AAAATTTTCGAAAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGACAGCATGGTCAGAGAAAACTCTGAAGAGAAGATTCTAGAGTCTAACAATGGAAA
AGCAGATCAAAGGAATATTAAGAGGAAGAAGCGGCTCTTAAAGGAAGCAGCAAATGCAGATATGCGTGGTATTTGTTACTTGAGCCGAGTTCCTCCACACATGGATCCTT
TGAGACTTCGTCAGATCCTCTCACAGTATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTACAACGAAAGCGTGCAGGAGGCTTTCGAGGA
CAGTTTTTTTCAGAAGGGTGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACAGATAGGAGGAAGGAAGAGGTCATCTTTTTA
CTATGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACTGAAGAAACTGCTTACAAGCATGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTT
CTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCGAAAGTGGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAAAAGATTCA
GAAATGAATTCTGCACTTGCTGATAGCCAGAAACTTCCAAAGTTGATCCGCAGCTTCCCACAAACACAACCAGTTGCACATTCTGCAGTACAAAACAAACAGAGACTATC
TACAAATGTCCTGGCTGGGGCTGAGTTCAGTATGATTTTTAAAATGGTGAAAAGTAATTTTAGGTGTTTGGAAGTTCCTAGTCGTCTATATTTTCCAACTGCTATTAATC
GAAGAGAATTTAAGACAAGGGATTTGCTATCCAGAGACTTGGGCTTTTTGTAGGCTGAGCCAATCAGTCTTTGACGTATCAATTTATTTATCTCATTACACAACAGAGAA
GGTGGAGAAGGAATAGTTGTAGCTTTGATATTTGTATACTTAAATCAAACTTTTTGTATTTGAAATCATGAGGCAAGGGAAAAAATTTTGTATTTAAATTTATTTTAACA
TGGGTACAAACGAGGTTGATGGAATTTCAATACCAAATGAATAGTCTTAAAGAAATTAA
Protein sequenceShow/hide protein sequence
MSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVAEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVEESSIKDEAGEYENRAETFMKEGSPFSNGGSE
KIFEKRKIALEDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRG
QFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDS
EMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAGAEFSMIFKMVKSNFRCLEVPSRLYFPTAINRREFKTRDLLSRDLGFL