; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G020180 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G020180
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionphotosynthetic NDH subunit of lumenal location 1, chloroplastic
Genome locationCG_Chr09:37245779..37247926
RNA-Seq ExpressionClCG09G020180
SyntenyClCG09G020180
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002683 - PsbP, C-terminal
IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953447.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita moschata]4.2e-12493.22Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL AASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_022990449.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita maxima]4.7e-12392.37Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL AA PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_023534746.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]2.7e-12392.37Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL AA+PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889544.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida]8.8e-13098.31Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCFSWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPLLLGVGALATSLLAASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889545.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Benincasa hispida]1.1e-12797.88Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCFSWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPLLLGVGALATSLLAASPLFA E+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

TrEMBL top hitse value%identityAlignment
A0A0A0KNR7 PsbP domain-containing protein4.2e-12294.07Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVP TASNWKL+LLPFNEPSTAT SFSS STINCS ER SR+EG  NRRPLLLGVGALATSLL ASPLFAEEIPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+ YYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A1S3CKZ3 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X11.5e-12293.22Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPTTASNWKL+LLPFNEP+TAT SFSS STINCS ERTSR+EG  NRRPLLLGVGALATSLL ASPLFA+E+PKNYRAFVD TDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYTFEYKLSSRAFSRT+FATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN22 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X22.5e-12292.8Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL AASPLFA E+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN93 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X12.0e-12493.22Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL AASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1JS28 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X12.3e-12392.37Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL AA PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

SwissProt top hitse value%identityAlignment
O23403 PsbP domain-containing protein 1, chloroplastic9.1e-0522.32Show/hide
Query:  INCSTERTSREEGHCNRRPLLLGVGALATSLLAAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD
        INC T+  +++     RR  ++ +G L + L+ +    P      P  +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +
Subjt:  INCSTERTSREEGHCNRRPLLLGVGALATSLLAAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD

Query:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV
           + + G  +EV   +++         R     Q   +        DG+ YY  E  + S A                 ++R   A + + N R Y++ 
Subjt:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV

Query:  VGANDRRWRRYRDMLKVVADSFRV
        +   ++ +      L+ V DSFRV
Subjt:  VGANDRRWRRYRDMLKVVADSFRV

O80634 Photosynthetic NDH subunit of lumenal location 1, chloroplastic3.3e-7158.47Show/hide
Query:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        ++S  C  + PT +   K  +L  N    A C  SS    + S     +  G +  RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSYYY
Subjt:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+A+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
         N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

P82538 PsbP-like protein 1, chloroplastic8.5e-3539.06Show/hide
Query:  STERTSREEGHCNRRPLL-LGVGALATSLLAASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL+ +PL FA E  K + A  D+ D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREEGHCNRRPLL-LGVGALATSLLAASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE

Query:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DG+ YY FE+ + +R ++R +  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

Arabidopsis top hitse value%identityAlignment
AT2G39470.1 PsbP-like protein 22.3e-7258.47Show/hide
Query:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        ++S  C  + PT +   K  +L  N    A C  SS    + S     +  G +  RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSYYY
Subjt:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+A+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
         N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.2 PsbP-like protein 25.8e-7157.56Show/hide
Query:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSY
        ++S  C  + PT +   ++ L P   PS   C         C     + ++G  N   RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSY
Subjt:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSY

Query:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATI
        YYPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+
Subjt:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATI

Query:  AIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  AIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.3 PsbP-like protein 23.2e-4556.98Show/hide
Query:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSY
        ++S  C  + PT +   ++ L P   PS   C         C     + ++G  N   RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSY
Subjt:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSY

Query:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKE
        YYPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKE
Subjt:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKE

AT3G55330.1 PsbP-like protein 16.0e-3639.06Show/hide
Query:  STERTSREEGHCNRRPLL-LGVGALATSLLAASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL+ +PL FA E  K + A  D+ D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREEGHCNRRPLL-LGVGALATSLLAASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE

Query:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DG+ YY FE+ + +R ++R +  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

AT4G15510.1 Photosystem II reaction center PsbP family protein6.5e-0622.32Show/hide
Query:  INCSTERTSREEGHCNRRPLLLGVGALATSLLAAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD
        INC T+  +++     RR  ++ +G L + L+ +    P      P  +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +
Subjt:  INCSTERTSREEGHCNRRPLLLGVGALATSLLAAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD

Query:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV
           + + G  +EV   +++         R     Q   +        DG+ YY  E  + S A                 ++R   A + + N R Y++ 
Subjt:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV

Query:  VGANDRRWRRYRDMLKVVADSFRV
        +   ++ +      L+ V DSFRV
Subjt:  VGANDRRWRRYRDMLKVVADSFRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCAACCTCTTGCTTCAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCATCAACAGCTACTTGCTCATTTTCTTC
CTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCTCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCGCCG
CAAGTCCCCTCTTTGCTGAAGAAATCCCGAAAAATTATCGAGCATTCGTAGACTCTACAGATGGGTATTCCTATTACTACCCCTCTGATTGGAGGGAATTTGATTTTAGA
GCCCATGATTCCGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACGGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGT
TGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATA
AACTTAGTTCTAGAGCATTCTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTATACTTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTAT
CGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTCAACCTCTTGCTTCAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCATCAACAGCTACTTGCTCATTTTCTTC
CTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCTCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCGCCG
CAAGTCCCCTCTTTGCTGAAGAAATCCCGAAAAATTATCGAGCATTCGTAGACTCTACAGATGGGTATTCCTATTACTACCCCTCTGATTGGAGGGAATTTGATTTTAGA
GCCCATGATTCCGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACGGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGT
TGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATA
AACTTAGTTCTAGAGCATTCTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTATACTTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTAT
CGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATATGA
Protein sequenceShow/hide protein sequence
MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFR
AHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRY
RDMLKVVADSFRVLDI