; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G020710 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G020710
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRRM domain-containing protein
Genome locationCG_Chr09:37723503..37728659
RNA-Seq ExpressionClCG09G020710
SyntenyClCG09G020710
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465688.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo]3.4e-18581.4Show/hide
Query:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDE------DEDEI
        M+DS+ LHCRF T+ P +Q SCHYNS N TK R PHL+LSL  GSGPMGFPVFA K  GKGGI LT+ S SD +FD+FFDEDEDNFQDE      DEDEI
Subjt:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDE------DEDEI

Query:  LLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKG
        LLPLKNTREWHAARPRGFGEGK YDTSIEDKLLQEMEQ REAQA NIN LKNQ SS PNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI+RDL+VAFKG
Subjt:  LLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKG

Query:  FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDL
        FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYL+FGRVQKQIKCEIMNRQTSSSARKSSV STN+S+L+ILEE AEQFAD+DVDL
Subjt:  FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDL

Query:  TGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSA
             RT+IE+ ED+LAY +E HS D DDNGVESRTE +IQS S+KEVNKI ELE IL +G+EE+HRE+SPIK KTKVSKKKQPKEKGEKK L  IPGSA
Subjt:  TGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSA

Query:  KRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KRLRIKEKAVLTDVYSRYG KSAL+S+EG+
Subjt:  KRLRIKEKAVLTDVYSRYGNKSALVSKEGN

XP_022999318.1 uncharacterized protein LOC111493728 [Cucurbita maxima]5.2e-16573.74Show/hide
Query:  MIDSSSLHCRFITVWPS----------VQPSCHYN----SPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNF
        M+DS  LHCRFIT WPS          + P+ +YN    +PN TK RS H SLSL HG  PM FPVF+ K  GKGG+ LT QS SD EFD   DED D  
Subjt:  MIDSSSLHCRFITVWPS----------VQPSCHYN----SPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNF

Query:  QDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHR
             DE+LLPL N REW AARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NIN LK+Q  S PNSSRNVV+  APEI +TGVRVR+INLPKK+NIHR
Subjt:  QDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHR

Query:  DLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQ
        DL++AFKGFPGI+NITPAVIGNKKTRDPICKGFAFVDCKSEGDA+SFLQ+FSG+YLTFGRVQKQIKCEIMN+QTS+ AR+ SVVSTNHS+L+ILEE AEQ
Subjt:  DLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQ

Query:  FADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKS
         AD+D+DL G V RTR+EDIEDNLAY SELHSDD DDNGVESRTES+I   S+KE++KIHELEEI P+GREEVHRE  PI  KT+VSKKKQPKEKGE KS
Subjt:  FADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKS

Query:  LIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
         + IPGSAKRLRIKEKAVLTDVYSRYG KSAL SKEGN
Subjt:  LIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

XP_023547227.1 uncharacterized protein LOC111806104 [Cucurbita pepo subsp. pepo]5.2e-16573.24Show/hide
Query:  MIDSSSLHCRFITVWPSVQPSCHYNS-----------------PNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDE
        M+DS  LHCRFIT WPSV  S   NS                  N TK RS H SLSL HG  PM FPV A K  GKGG+ LT+QS SDNEFD   DED 
Subjt:  MIDSSSLHCRFITVWPSVQPSCHYNS-----------------PNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDE

Query:  DNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKN
        D       DE+LLPL N REW AARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NIN LK+Q  S PNS RNV +  APEI +TGVRVR+INLPKK+N
Subjt:  DNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKN

Query:  IHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEA
        IHRDL++AFKGFPGI+NITPAVIGNKKTRDPICKGFAFVDCKSEGDA+SFLQ+FSG+YLTFGRVQKQIKCEIMN+QTS+SAR+ SVVSTN S+L+ILEE 
Subjt:  IHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEA

Query:  AEQFADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGE
        A Q AD+D+DL G V RTR+EDIEDNLAY SELHSDDEDDNGVESRTES+I   S+KE++KIHELEEI P+GREEVHRE  PI  KTKVSKKKQPKEKGE
Subjt:  AEQFADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGE

Query:  KKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KKS + IPGSAKRLRIKEKAVLTDVYSRYG KSA+ SKEGN
Subjt:  KKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

XP_031741253.1 uncharacterized protein LOC101210443 [Cucumis sativus]4.7e-18281.6Show/hide
Query:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN
        M DS+ LHC F T+ P +Q SCHYNS   TK R PHL+LSL   SGPMGFPVFA K  GKGGI LTE S SD  FD+FFDE EDNFQ  DED+ILLPLKN
Subjt:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN

Query:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN
        T+EWHAARPRGFGEGK YDTSIED LLQEMEQ REAQA NIN LK+QSSS PNSSRNVVEIAAPEIVSTGV VRIINLP+KKNIHRDL+VAFKGFPGIIN
Subjt:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN

Query:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR
        ITPAVIGNKKTRDP+CKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSAR SS+ STNHS+L+ILEE AEQF D+DVDL     R
Subjt:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR

Query:  TRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIK
        T+ EDIED+LAY SE HS +EDDNGVESRTE  IQS S+KEVNKI ELEEILP+GREE+HRE+SPIK KTKVSKKKQPKEKGEKK L  IPGSAKRLRIK
Subjt:  TRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIK

Query:  EKAVLTDVYSRYGNKSALVSKEGN
        EKAVLTDVYSRYG KSALVS+EGN
Subjt:  EKAVLTDVYSRYGNKSALVSKEGN

XP_038890170.1 uncharacterized protein LOC120079826 [Benincasa hispida]4.5e-19385.38Show/hide
Query:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN
        M DS SL CRF+T+WPSVQ  CHYNSPN TK R PH S SL HGSGPMGFPVFA K SGKGG+ LTEQS SD EFD FFDEDED+FQDEDEDEILLPLKN
Subjt:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN

Query:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN
        TREWH ARPRGFGEGK YDTSIEDKLLQEMEQSREAQA NIN L NQS+S P SSRN VE A  EIVSTGVRVRI+NLPKKKNIHRDLIVAFK FPGIIN
Subjt:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN

Query:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR
        ITPAVIGNKKTRDPICKGFAFVDCKSEGDALS LQAFSGRYLTFGRVQKQIKCEIMNR+T SS RKSSV STNHSQL ILEE AE+F D+DVDL G  MR
Subjt:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR

Query:  TRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIK
        TRIEDIED+L Y SELHSD EDDNGVESRTES+IQS SQ+EVNKIHE EEIL + REEV REISPIKGKTKVSKKKQPKEKGEKKSL  IPGSAKRLRIK
Subjt:  TRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIK

Query:  EKAVLTDVYSRYGNKSALVSKEGN
        EKAVLTDVYSRYGNKSALVSKEGN
Subjt:  EKAVLTDVYSRYGNKSALVSKEGN

TrEMBL top hitse value%identityAlignment
A0A0A0KQN3 Uncharacterized protein5.0e-18281.37Show/hide
Query:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN
        M DS+ LHC F T+ P +Q SCHYNS   TK R PHL+LSL   SGPMGFPVFA K  GKGGI LTE S SD  FD+FFDE EDNFQ  DED+ILLPLKN
Subjt:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKN

Query:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN
        T+EWHAARPRGFGEGK YDTSIED LLQEMEQ REAQA NIN LK+QSSS PNSSRNVVEIAAPEIVSTGV VRIINLP+KKNIHRDL+VAFKGFPGIIN
Subjt:  TREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIIN

Query:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR
        ITPAVIGNKKTRDP+CKGFAFVDCKSEGDALSFLQAF+GRYLTFGRVQKQIKCEIMNRQTSSSAR SS+ STNHS+L+ILEE AEQF D+DVDL     R
Subjt:  ITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMR

Query:  TRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIK
        T+ EDIED+LAY SE HS +EDDNGVESRTE  IQS S+KEVNKI ELEEILP+GREE+HRE+SPIK KTKVSKKKQPKEKGEKK L  IPGSAKRLRIK
Subjt:  TRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIK

Query:  EKAVLTDVYSRYGNKSALVSKEGN
        EKAVLTDVYSRYG KSALVS+EGN
Subjt:  EKAVLTDVYSRYGNKSALVSKEGN

A0A1S3CPG6 uncharacterized protein LOC1035033171.7e-18581.4Show/hide
Query:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDE------DEDEI
        M+DS+ LHCRF T+ P +Q SCHYNS N TK R PHL+LSL  GSGPMGFPVFA K  GKGGI LT+ S SD +FD+FFDEDEDNFQDE      DEDEI
Subjt:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDE------DEDEI

Query:  LLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKG
        LLPLKNTREWHAARPRGFGEGK YDTSIEDKLLQEMEQ REAQA NIN LKNQ SS PNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNI+RDL+VAFKG
Subjt:  LLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKG

Query:  FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDL
        FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYL+FGRVQKQIKCEIMNRQTSSSARKSSV STN+S+L+ILEE AEQFAD+DVDL
Subjt:  FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDL

Query:  TGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSA
             RT+IE+ ED+LAY +E HS D DDNGVESRTE +IQS S+KEVNKI ELE IL +G+EE+HRE+SPIK KTKVSKKKQPKEKGEKK L  IPGSA
Subjt:  TGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSA

Query:  KRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KRLRIKEKAVLTDVYSRYG KSAL+S+EG+
Subjt:  KRLRIKEKAVLTDVYSRYGNKSALVSKEGN

A0A6J1DEC7 uncharacterized protein LOC1110193051.0e-14270.57Show/hide
Query:  NSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIED
        ++PN TK  SPH  LSL H    +GF VFA+K   K G G+ + + SD EFD+FFDE         E+E+LLPLK  +EW A RPRGFGEGKEYDTSIED
Subjt:  NSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIED

Query:  KLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDC
        KLLQE+EQSR AQA NIN LKNQSS   NSS++V E+ A +I STG  VRI+NLPKKKNIHRDL+VAFK FPGIINI PAV+GNKKTRDPICKGFAFVDC
Subjt:  KLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDC

Query:  KSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDN
        KSEGDA+ FLQ FSG+YLTFGRVQKQIKCE++NR+TS+SA +SSV ST H+   I E  AEQ AD+D DL+  V+RTR+ED+E+NL   SELHSDDED+ 
Subjt:  KSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDN

Query:  GVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKS-ALVSKEG
          ESRTES+I+S S+KE+ +IHE EEILP GREE+HREI PIKGK KVSKKKQPKEKGEKKSL  IPGSAKRLR+KEKAVLTDVYSRYGNKS ALVSKEG
Subjt:  GVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKS-ALVSKEG

Query:  N
        N
Subjt:  N

A0A6J1G3T4 uncharacterized protein LOC1114505245.6e-16573.02Show/hide
Query:  MIDSSSLHCRFITVWPSVQPS-------------CHYN----SPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDE
        M+DS  LHCRF T WPS   S               YN    +PN TK RS H SLSL HG  PM FPV A K  GKGG+ LT+QS SDNEFD   DED 
Subjt:  MIDSSSLHCRFITVWPSVQPS-------------CHYN----SPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDE

Query:  DNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKN
        D       DE+LLPL N REW AARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NIN LK+Q  S PNS RNVV+  APEI +TGVRVRIINLPKK+N
Subjt:  DNFQDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKN

Query:  IHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEA
        IHRDL++AF+GFPGI+NITPAVIGNKKTRDPICKGFAFVDCKSEGDA+SFLQ+FSG+YLTFGRVQKQIKCEIMN+QTS+SAR+ SVVSTN S+L+ILEE 
Subjt:  IHRDLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEA

Query:  AEQFADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGE
        AEQ AD+D+DL G V RTR+ED+EDNLAY SEL SDDEDDNGVESRTES+I   S+KE++KIHELEE+ P+GREEVHRE  PI  KTKVSKKKQPKEKGE
Subjt:  AEQFADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGE

Query:  KKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
        KKS + IPGSAKRLRIKEKAVLTDVYSRYG KSAL SKEGN
Subjt:  KKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

A0A6J1KJD4 uncharacterized protein LOC1114937282.5e-16573.74Show/hide
Query:  MIDSSSLHCRFITVWPS----------VQPSCHYN----SPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNF
        M+DS  LHCRFIT WPS          + P+ +YN    +PN TK RS H SLSL HG  PM FPVF+ K  GKGG+ LT QS SD EFD   DED D  
Subjt:  MIDSSSLHCRFITVWPS----------VQPSCHYN----SPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNF

Query:  QDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHR
             DE+LLPL N REW AARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NIN LK+Q  S PNSSRNVV+  APEI +TGVRVR+INLPKK+NIHR
Subjt:  QDEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHR

Query:  DLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQ
        DL++AFKGFPGI+NITPAVIGNKKTRDPICKGFAFVDCKSEGDA+SFLQ+FSG+YLTFGRVQKQIKCEIMN+QTS+ AR+ SVVSTNHS+L+ILEE AEQ
Subjt:  DLIVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQ

Query:  FADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKS
         AD+D+DL G V RTR+EDIEDNLAY SELHSDD DDNGVESRTES+I   S+KE++KIHELEEI P+GREEVHRE  PI  KT+VSKKKQPKEKGE KS
Subjt:  FADVDVDLTGRVMRTRIEDIEDNLAYASELHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKS

Query:  LIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
         + IPGSAKRLRIKEKAVLTDVYSRYG KSAL SKEGN
Subjt:  LIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G70200.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-4731.51Show/hide
Query:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSG--------PMGFPVFARKTSGKGGIGLTEQSVSDNEFD----KFFDEDEDNFQD
        + +S  LH   ++ + S   SC     +  +  S ++S+S                GF  FA      G   + E    D E D    +F  EDE   ++
Subjt:  MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSG--------PMGFPVFARKTSGKGGIGLTEQSVSDNEFD----KFFDEDEDNFQD

Query:  EDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDL
        EDE E  LP+   ++W   +PRGFG GK+Y+T IEDKLL E+EQS +AQA N+N LKN         R+   +        G RVR+ NLPKKKN+HRDL
Subjt:  EDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDL

Query:  IVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVST----------------
         VAFK   G+++ITPAV GNKKT+DP+CKGFA VD K+E DA  F++ F+G+ L FG+V KQIKC+++   +  S  K   +                  
Subjt:  IVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVST----------------

Query:  ----------------------------------NHSQLTILEEAAEQFADVDVDL--TGRVMRTRI---EDIEDNLA---------YASELHSDDEDDN
                                          NH   +I     E   D +  L    +V++  I   E++E  L           A+E H DDE   
Subjt:  ----------------------------------NHSQLTILEEAAEQFADVDVDL--TGRVMRTRI---EDIEDNLA---------YASELHSDDEDDN

Query:  GVESRT----------------------ESRIQSQSQKEVNKIHELEEIL---------PEGREEVHREISPIKGKTKVSKKKQP---KEKGEKKSLIGI
           + T                       S + S  +  V++I  LE+ L           G ++   + + ++GK K  KKK     K + +K + I I
Subjt:  GVESRT----------------------ESRIQSQSQKEVNKIHELEEIL---------PEGREEVHREISPIKGKTKVSKKKQP---KEKGEKKSLIGI

Query:  PGSAKRLRIKEKAVLTDVYSRYGNKSALVS
        PGS+KRL++KEKA+LT V  +Y  K A  S
Subjt:  PGSAKRLRIKEKAVLTDVYSRYGNKSALVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGATTCCTCGTCTCTTCACTGCCGTTTCATCACGGTTTGGCCGTCAGTGCAACCCAGTTGCCATTACAACTCTCCCAATTTGACAAAACTCCGGTCACCC
CATCTCAGTTTATCTCTTGCTCATGGCTCAGGACCAATGGGTTTTCCTGTTTTTGCGAGGAAGACGTCTGGGAAAGGCGGCATTGGCCTCACTGAGCAGAGTGTT
TCCGACAATGAGTTCGATAAATTTTTCGATGAGGATGAGGATAATTTTCAAGACGAGGATGAGGACGAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGCAT
GCGGCGAGGCCTCGTGGATTTGGAGAAGGGAAGGAGTATGACACCTCGATTGAAGACAAATTGCTACAGGAAATGGAGCAGAGTAGGGAAGCTCAGGCTACAAAT
ATCAATAATCTCAAGAATCAGTCTTCTTCTGTGCCTAACTCTAGTAGAAATGTCGTGGAGATAGCAGCTCCAGAAATTGTTAGTACTGGAGTTCGTGTACGCATT
ATCAACCTTCCTAAAAAAAAGAACATTCACAGAGACCTGATCGTGGCTTTTAAAGGGTTTCCTGGAATAATCAATATAACTCCTGCAGTCATTGGAAACAAAAAG
ACTAGGGATCCAATCTGCAAGGGGTTTGCATTTGTTGATTGCAAATCTGAAGGAGATGCCTTAAGTTTTCTGCAAGCATTTTCTGGTCGATATCTTACGTTTGGA
AGGGTTCAGAAGCAAATAAAATGTGAAATAATGAATCGACAAACTTCGAGTTCAGCTCGCAAAAGTTCAGTGGTTAGTACCAATCATTCTCAACTAACTATTCTT
GAAGAGGCAGCAGAGCAGTTTGCTGACGTGGACGTGGATTTAACTGGAAGAGTCATGAGAACAAGGATTGAGGATATTGAAGACAATCTGGCGTATGCCAGTGAA
TTACATTCGGATGATGAGGATGATAATGGTGTAGAATCAAGAACAGAGTCCAGAATTCAGTCACAATCCCAGAAGGAAGTAAATAAAATTCATGAACTAGAAGAA
ATTCTTCCTGAAGGAAGAGAAGAAGTTCATCGGGAAATTTCACCTATCAAAGGGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAAAGGAGAGAAGAAA
TCATTGATAGGAATTCCAGGATCTGCCAAAAGGTTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCGAGATATGGAAATAAATCAGCTTTGGTTTCA
AAAGAAGGGAACTAA
mRNA sequenceShow/hide mRNA sequence
GTTCTTCAGAGCGGAGCAGTGATGATCGATTCCTCGTCTCTTCACTGCCGTTTCATCACGGTTTGGCCGTCAGTGCAACCCAGTTGCCATTACAACTCTCCCAAT
TTGACAAAACTCCGGTCACCCCATCTCAGTTTATCTCTTGCTCATGGCTCAGGACCAATGGGTTTTCCTGTTTTTGCGAGGAAGACGTCTGGGAAAGGCGGCATT
GGCCTCACTGAGCAGAGTGTTTCCGACAATGAGTTCGATAAATTTTTCGATGAGGATGAGGATAATTTTCAAGACGAGGATGAGGACGAGATTCTTTTGCCGTTA
AAGAACACGAGAGAGTGGCATGCGGCGAGGCCTCGTGGATTTGGAGAAGGGAAGGAGTATGACACCTCGATTGAAGACAAATTGCTACAGGAAATGGAGCAGAGT
AGGGAAGCTCAGGCTACAAATATCAATAATCTCAAGAATCAGTCTTCTTCTGTGCCTAACTCTAGTAGAAATGTCGTGGAGATAGCAGCTCCAGAAATTGTTAGT
ACTGGAGTTCGTGTACGCATTATCAACCTTCCTAAAAAAAAGAACATTCACAGAGACCTGATCGTGGCTTTTAAAGGGTTTCCTGGAATAATCAATATAACTCCT
GCAGTCATTGGAAACAAAAAGACTAGGGATCCAATCTGCAAGGGGTTTGCATTTGTTGATTGCAAATCTGAAGGAGATGCCTTAAGTTTTCTGCAAGCATTTTCT
GGTCGATATCTTACGTTTGGAAGGGTTCAGAAGCAAATAAAATGTGAAATAATGAATCGACAAACTTCGAGTTCAGCTCGCAAAAGTTCAGTGGTTAGTACCAAT
CATTCTCAACTAACTATTCTTGAAGAGGCAGCAGAGCAGTTTGCTGACGTGGACGTGGATTTAACTGGAAGAGTCATGAGAACAAGGATTGAGGATATTGAAGAC
AATCTGGCGTATGCCAGTGAATTACATTCGGATGATGAGGATGATAATGGTGTAGAATCAAGAACAGAGTCCAGAATTCAGTCACAATCCCAGAAGGAAGTAAAT
AAAATTCATGAACTAGAAGAAATTCTTCCTGAAGGAAGAGAAGAAGTTCATCGGGAAATTTCACCTATCAAAGGGAAAACTAAGGTTTCAAAGAAGAAGCAACCT
AAGGAAAAAGGAGAGAAGAAATCATTGATAGGAATTCCAGGATCTGCCAAAAGGTTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCGAGATATGGA
AATAAATCAGCTTTGGTTTCAAAAGAAGGGAACTAAAAGGAGTGGATGTTCCCTGAAATTAAGAACCAAATAAGCTGCTGAAGGACGCAATAATATGACGTATTT
TGCCTCTATCTAGTGCATTGGTATTGGTATTTCAAGTCAAATTCCTGCCAAAAATGAGAATTATTGAATCACCTTATCAGGTAAGGATGGTTTGGATTGCTGGAA
TGAAACCAAGATTGTTAACCGGGTTGTGTTGGGATAATTGGTGGACTTTGGGTCTGTTTGGGATTGCTTTTAGGAGGATTAAAGGCGATTTAGGAGAAGTTTAAC
CATTTTGTATGTTTGGTAAGACAGATTATTCCTTGG
Protein sequenceShow/hide protein sequence
MIDSSSLHCRFITVWPSVQPSCHYNSPNLTKLRSPHLSLSLAHGSGPMGFPVFARKTSGKGGIGLTEQSVSDNEFDKFFDEDEDNFQDEDEDEILLPLKNTREWH
AARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINNLKNQSSSVPNSSRNVVEIAAPEIVSTGVRVRIINLPKKKNIHRDLIVAFKGFPGIINITPAVIGNKK
TRDPICKGFAFVDCKSEGDALSFLQAFSGRYLTFGRVQKQIKCEIMNRQTSSSARKSSVVSTNHSQLTILEEAAEQFADVDVDLTGRVMRTRIEDIEDNLAYASE
LHSDDEDDNGVESRTESRIQSQSQKEVNKIHELEEILPEGREEVHREISPIKGKTKVSKKKQPKEKGEKKSLIGIPGSAKRLRIKEKAVLTDVYSRYGNKSALVS
KEGN