; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G021280 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G021280
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationCG_Chr09:38258137..38266792
RNA-Seq ExpressionClCG09G021280
SyntenyClCG09G021280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607751.1 hypothetical protein SDJN03_01093, partial [Cucurbita argyrosperma subsp. sororia]8.1e-6569.23Show/hide
Query:  MEKFTDHCSSLC----------SSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLL-LLLIPSTLFLAKKKKSDS-------LQISATEHLFD
        MEKFTDHC+SLC          SSSS SSS  QSRLN+V+VS LLASICFL+LRFSPSFL+LL LLLIPS  FLA KK   S       L IS   HLFD
Subjt:  MEKFTDHCSSLC----------SSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLL-LLLIPSTLFLAKKKKSDS-------LQISATEHLFD

Query:  EKPQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLP
        EKPQ TVEE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP         N   +RNL+TCLP
Subjt:  EKPQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLP

Query:  DLLPDSVLRQHGFVELLEEINEEDNLIEIDISKG
        DLLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  DLLPDSVLRQHGFVELLEEINEEDNLIEIDISKG

KGN44012.1 hypothetical protein Csa_018206 [Cucumis sativus]6.2e-6574.88Show/hide
Query:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLT-LLLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGE
        MEKFT HCSSL SSSS    FTQSR NL I S LLASI FLTLRFSPSF T LLLLLIP+ LF+A KK +         HLFDE PQTT  +ES  QIG+
Subjt:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLT-LLLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGE

Query:  ERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEE
          SSDDETS  SSSSN+GGLG+GDF SDLWM+LDELTRNLP SED SS   +DDDSLIEIPLLPN N IRNL+TCLP+LLPDSVLRQHGFVELLEEINEE
Subjt:  ERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEE

Query:  DNLIEIDISKG
        DNLIEIDISKG
Subjt:  DNLIEIDISKG

XP_022941469.1 uncharacterized protein LOC111446758 [Cucurbita moschata]8.1e-6569.83Show/hide
Query:  MEKFTDHCSSLC--------SSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLL-LLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK
        MEKFTDHC+SLC        SSSS SSS  QSRLN+V+VS LLASICFL+LRFSPSFL+LL LLLIPS  FLA KK   S       L IS   HLFDEK
Subjt:  MEKFTDHCSSLC--------SSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLL-LLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK

Query:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL
        PQ TVEE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP         N   +RNL+TCLPDL
Subjt:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL

Query:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG
        LPDSVL+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG

XP_022981598.1 uncharacterized protein LOC111480668 [Cucurbita maxima]8.6e-6771.81Show/hide
Query:  MEKFTDHCSSLCSS----SSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLLLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEKPQTTV
        MEKFTDHC+SLCSS    SS SSS  QSRLN+V+VS LLASICFL+LRFSPSFL+LLLLLIPS  FLA KK   S       L IS   HLFDEKPQ TV
Subjt:  MEKFTDHCSSLCSS----SSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLLLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEKPQTTV

Query:  EEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAI---------RNLDTCLPDLLPDSV
        EE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP  +AI         RNL+TCLPDLLPDSV
Subjt:  EEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAI---------RNLDTCLPDLLPDSV

Query:  LRQHGFVELLEEINEEDNLIEIDISKG
        L+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LRQHGFVELLEEINEEDNLIEIDISKG

XP_023524760.1 uncharacterized protein LOC111788599 isoform X2 [Cucurbita pepo subsp. pepo]1.1e-6469.83Show/hide
Query:  MEKFTDHCSSLCS--------SSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLT-LLLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK
        MEKFTDHC+SLCS        SSS SSS  QSRLN+V+VS LLASICFL+LRFSPSFLT LLLLLIPS  FLA KK   S       L IS   HLFDEK
Subjt:  MEKFTDHCSSLCS--------SSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLT-LLLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK

Query:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL
        PQ TVEE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL  NLPFS+DSSSEDDDSLIEIPLLP         N   +RNL+TCLPDL
Subjt:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL

Query:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG
        LPDSVL+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG

TrEMBL top hitse value%identityAlignment
A0A0A0K6W9 Uncharacterized protein3.0e-6574.88Show/hide
Query:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLT-LLLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGE
        MEKFT HCSSL SSSS    FTQSR NL I S LLASI FLTLRFSPSF T LLLLLIP+ LF+A KK +         HLFDE PQTT  +ES  QIG+
Subjt:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLT-LLLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGE

Query:  ERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEE
          SSDDETS  SSSSN+GGLG+GDF SDLWM+LDELTRNLP SED SS   +DDDSLIEIPLLPN N IRNL+TCLP+LLPDSVLRQHGFVELLEEINEE
Subjt:  ERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEE

Query:  DNLIEIDISKG
        DNLIEIDISKG
Subjt:  DNLIEIDISKG

A0A2N9IRF2 Uncharacterized protein1.5e-0834.33Show/hide
Query:  SRLNLVIVSILLASIC---FLTLRFSPSFLTLLLLLIPSTLF---LAKKK-----------------------KSDSLQISATEHLFDEKPQTTVEEESA
        SR +L+ V++L+ S+    F++  FSP+ L  + +L+ STLF   L+KKK                       K    Q    + L +   Q  V +E+ 
Subjt:  SRLNLVIVSILLASIC---FLTLRFSPSFLTLLLLLIPSTLF---LAKKK-----------------------KSDSLQISATEHLFDEKPQTTVEEESA

Query:  AQIGEE---RSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDS-SSEDDDSLIEIPLLPNMNA------IRNLDTCLPDLLPDSVLRQH
          +  E    S  D    S S S+N  L    F  +L M  + + +NL FS+ S S EDDDSLIEI L  + +        +   + LPDLLP+S+ +Q 
Subjt:  AQIGEE---RSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDS-SSEDDDSLIEIPLLPNMNA------IRNLDTCLPDLLPDSVLRQH

Query:  GFVELLEEI---NEEDNLIEIDISKGSKCSRTR
        G +ELL EI   NEE+NLIEID+S GS   + R
Subjt:  GFVELLEEI---NEEDNLIEIDISKGSKCSRTR

A0A5D3C7W2 Uncharacterized protein1.1e-6474.77Show/hide
Query:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLVIVSILLASICFL-TLRFSPSFLT-LLLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIG
        MEKFT HCSSL SSSS    FTQSR NL I S LLASI FL TLRFSPSF T LLLLL+P+TLFLA +K       S   HLFDEK  TT  +ESA  IG
Subjt:  MEKFTDHCSSLCSSSSLSSSFTQSRLNLVIVSILLASICFL-TLRFSPSFLT-LLLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIG

Query:  EERSSDDETSTSSS--SSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEI
        E  SSDDETS SSS  SSN+GGLG+GDF SDLWM+LDELTRNLP SED SS   +DDDSLIEIPLLPN N IRNL+TCLP+LLPDSVLRQHGFVELLEEI
Subjt:  EERSSDDETSTSSS--SSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSS---EDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEI

Query:  NEEDNLIEIDISKG
        NEEDNLIEIDISKG
Subjt:  NEEDNLIEIDISKG

A0A6J1FNF5 uncharacterized protein LOC1114467583.9e-6569.83Show/hide
Query:  MEKFTDHCSSLC--------SSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLL-LLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK
        MEKFTDHC+SLC        SSSS SSS  QSRLN+V+VS LLASICFL+LRFSPSFL+LL LLLIPS  FLA KK   S       L IS   HLFDEK
Subjt:  MEKFTDHCSSLC--------SSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLL-LLLIPSTLFLAKKKKSDS-------LQISATEHLFDEK

Query:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL
        PQ TVEE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP         N   +RNL+TCLPDL
Subjt:  PQTTVEEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLP---------NMNAIRNLDTCLPDL

Query:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG
        LPDSVL+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LPDSVLRQHGFVELLEEINEEDNLIEIDISKG

A0A6J1J2I9 uncharacterized protein LOC1114806684.2e-6771.81Show/hide
Query:  MEKFTDHCSSLCSS----SSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLLLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEKPQTTV
        MEKFTDHC+SLCSS    SS SSS  QSRLN+V+VS LLASICFL+LRFSPSFL+LLLLLIPS  FLA KK   S       L IS   HLFDEKPQ TV
Subjt:  MEKFTDHCSSLCSS----SSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLLLLLIPSTLFLAKKKKSDS-------LQISATEHLFDEKPQTTV

Query:  EEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAI---------RNLDTCLPDLLPDSV
        EE SAAQIGEE SSDD+     SSSN G    GDF SDLWM LDEL RNLPFS+DSSSEDDDSLIEIPLLP  +AI         RNL+TCLPDLLPDSV
Subjt:  EEESAAQIGEERSSDDETSTSSSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAI---------RNLDTCLPDLLPDSV

Query:  LRQHGFVELLEEINEEDNLIEIDISKG
        L+Q+GFVELLEEINEEDNLIEIDIS+G
Subjt:  LRQHGFVELLEEINEEDNLIEIDISKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGTTCACTGACCACTGCTCTTCACTCTGTTCATCTTCATCATTATCATCCTCTTTCACACAATCACGCCTCAATCTCGTCATTGTTTCAATTCTTCTAGCTTC
AATCTGTTTCCTCACTCTCCGATTCTCCCCTTCCTTCCTCACACTCCTTCTTCTTCTAATCCCTTCCACTCTCTTCCTCGCTAAGAAGAAAAAATCAGATTCGCTTCAAA
TCTCCGCCACCGAACATCTGTTCGACGAAAAGCCTCAAACAACAGTGGAAGAAGAATCCGCTGCGCAAATCGGAGAAGAGCGTTCTTCCGATGATGAAACTAGTACTAGT
AGCAGCAGCAGTAATAATGGCGGATTAGGAAATGGAGATTTCAACTCCGATCTCTGGATGTATTTGGACGAACTGACACGGAATCTTCCGTTCTCTGAGGATTCGAGTTC
CGAAGACGACGATAGCCTGATTGAAATTCCTCTTCTTCCAAACATGAATGCGATTCGAAATCTTGATACGTGTTTGCCTGATTTGTTACCGGATTCTGTTTTGAGACAAC
ACGGATTTGTGGAGCTTTTGGAAGAGATCAATGAGGAAGATAACCTGATTGAGATCGATATTTCCAAAGGTTCCAAGTGTTCAAGAACTCGTTATCGACGTCGTTATCGC
CATGATCAACAATCATTGCTGCAATTAAGAGCTTTCCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACAACTCTGTCTCAGTCCAGGCTTTATCAAAACAA
AATGTCGTTCCATATCGGCAAGTTAGCCTTGTTATTTTGTAAATTTGTTAGGCCAATAGATACTGTAGACCTTTGGATGGCTTTTGGCTTCACTCGTTTTGTCTTCATGA
GGTCTAGTGTCTCCAGACTATGGTTTGTTTGCTCCTCAAAAGGTAGAGGAGAAGCTGAAAGACTAGGAAAGGAGAAAACATTTGCATTCTACATTGAAGCACAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGTTCACTGACCACTGCTCTTCACTCTGTTCATCTTCATCATTATCATCCTCTTTCACACAATCACGCCTCAATCTCGTCATTGTTTCAATTCTTCTAGCTTC
AATCTGTTTCCTCACTCTCCGATTCTCCCCTTCCTTCCTCACACTCCTTCTTCTTCTAATCCCTTCCACTCTCTTCCTCGCTAAGAAGAAAAAATCAGATTCGCTTCAAA
TCTCCGCCACCGAACATCTGTTCGACGAAAAGCCTCAAACAACAGTGGAAGAAGAATCCGCTGCGCAAATCGGAGAAGAGCGTTCTTCCGATGATGAAACTAGTACTAGT
AGCAGCAGCAGTAATAATGGCGGATTAGGAAATGGAGATTTCAACTCCGATCTCTGGATGTATTTGGACGAACTGACACGGAATCTTCCGTTCTCTGAGGATTCGAGTTC
CGAAGACGACGATAGCCTGATTGAAATTCCTCTTCTTCCAAACATGAATGCGATTCGAAATCTTGATACGTGTTTGCCTGATTTGTTACCGGATTCTGTTTTGAGACAAC
ACGGATTTGTGGAGCTTTTGGAAGAGATCAATGAGGAAGATAACCTGATTGAGATCGATATTTCCAAAGGTTCCAAGTGTTCAAGAACTCGTTATCGACGTCGTTATCGC
CATGATCAACAATCATTGCTGCAATTAAGAGCTTTCCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACAACTCTGTCTCAGTCCAGGCTTTATCAAAACAA
AATGTCGTTCCATATCGGCAAGTTAGCCTTGTTATTTTGTAAATTTGTTAGGCCAATAGATACTGTAGACCTTTGGATGGCTTTTGGCTTCACTCGTTTTGTCTTCATGA
GGTCTAGTGTCTCCAGACTATGGTTTGTTTGCTCCTCAAAAGGTAGAGGAGAAGCTGAAAGACTAGGAAAGGAGAAAACATTTGCATTCTACATTGAAGCACAAGGTTAA
Protein sequenceShow/hide protein sequence
MEKFTDHCSSLCSSSSLSSSFTQSRLNLVIVSILLASICFLTLRFSPSFLTLLLLLIPSTLFLAKKKKSDSLQISATEHLFDEKPQTTVEEESAAQIGEERSSDDETSTS
SSSSNNGGLGNGDFNSDLWMYLDELTRNLPFSEDSSSEDDDSLIEIPLLPNMNAIRNLDTCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGSKCSRTRYRRRYR
HDQQSLLQLRAFRPSFLDYRFKPSLTTLSQSRLYQNKMSFHIGKLALLFCKFVRPIDTVDLWMAFGFTRFVFMRSSVSRLWFVCSSKGRGEAERLGKEKTFAFYIEAQG