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ClCG09G021430 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G021430
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionORF43m
Genome locationCG_Chr09:38408549..38409009
RNA-Seq ExpressionClCG09G021430
SyntenyClCG09G021430
Gene Ontology termsGO:0006101 - citrate metabolic process (biological process)
GO:0006351 - transcription, DNA-templated (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0004108 - citrate (Si)-synthase activity (molecular function)
GO:0032549 - ribonucleoside binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]9.1e-2092.73Show/hide
Query:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
KAF4348549.1 hypothetical protein F8388_000228 [Cannabis sativa]1.4e-2092.98Show/hide
Query:  SSMDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        SSMDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  SSMDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
KAF4360944.1 hypothetical protein G4B88_015419 [Cannabis sativa]9.1e-2092.73Show/hide
Query:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
KAF4361765.1 hypothetical protein G4B88_012073 [Cannabis sativa]9.1e-2092.73Show/hide
Query:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
TYK06708.1 hypothetical protein E5676_scaffold13G00090 [Cucumis melo var. makuwa]9.1e-2092.73Show/hide
Query:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
TrEMBL top hitse value%identityAlignment
A0A6B9QF48 ORF43m4.4e-2092.73Show/hide
Query:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
A0A6B9QFK3 ORF43m4.4e-2092.73Show/hide
Query:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
A0A6B9QGL2 ORF43m4.4e-2092.73Show/hide
Query:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
A0A7J6DSE9 Uncharacterized protein ycf686.8e-2192.98Show/hide
Query:  SSMDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        SSMDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  SSMDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
A0A7J6ETR9 Citrate synthase4.4e-2092.73Show/hide
Query:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
        MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Subjt:  MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGACCGGAACATCTAGTATGGATCGTACATGGATGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCTCTGGGGAAGAGGATCAAGT
TGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAATCTTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATAGACGGGATCAAGCTTCTAACTAACTTGATTC
CGTATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGACCGGAACATCTAGTATGGATCGTACATGGATGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCTCTGGGGAAGAGGATCAAGT
TGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAATCTTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATAGACGGGATCAAGCTTCTAACTAACTTGATTC
CGTATTCTTGA
Protein sequenceShow/hide protein sequence
MEKKTGTSSMDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSIDGIKLLTNLIPYS