; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G022055 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G022055
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPectin lyase-like superfamily protein
Genome locationCG_Chr09:39044970..39046143
RNA-Seq ExpressionClCG09G022055
SyntenyClCG09G022055
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066598.1 exopolygalacturonase-like [Cucumis melo var. makuwa]3.7e-8056.27Show/hide
Query:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRW----------NS
        +LQAP DL  ++WISF+YIDQFTLTG GV DGQ KVAWGKNDC  NPKC K  I                             C++            NS
Subjt:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRW----------NS

Query:  HRS-------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF
          +       SIGI+VINTNIGTGDDCISLGDGSQQV ITNVTCGPG+G SVGSLGRY+GE PVQG+RA+NCTLINTTN            +G   D+HF
Subjt:  HRS-------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF

Query:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT
        +D++MVNV                    P KVKISNVSF  IRGT ANALAV+F+CS+QFPCEDI+V DINLTY GS  PISS CK VKPIVSGIQN   
Subjt:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT

Query:  CSSLASSASPP
        CSSL SS S P
Subjt:  CSSLASSASPP

XP_011656227.1 exopolygalacturonase [Cucumis sativus]1.4e-8255.99Show/hide
Query:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS-------
        +LQAP+DL G++WISFQ IDQFTLTG GV DGQ K+AWGKNDC+KNP C K PI                             C++    H +       
Subjt:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS-------

Query:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF
                  S+GI+VINT IGTGDDCISLGDGSQQVTITNVTC PG+G SVGSLGRY+GETPVQGVRA+NCTLINTTN             G   D+HF
Subjt:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF

Query:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT
        +D++MVNV                    P KVKISNVSF  IRGT AN LAV+F+CS+QFPCEDIEV DINLTY GS GPISS CKNVKP VSG+QN H 
Subjt:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT

Query:  CSSLASSAS
        C S A S S
Subjt:  CSSLASSAS

XP_011659855.2 exopolygalacturonase-like [Cucumis sativus]2.8e-8055.02Show/hide
Query:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS-------
        +LQAP+DL G++WISFQ IDQFTLTG GV DGQ K+AWGKNDC+KNP C K PI                             C++    H +       
Subjt:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS-------

Query:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF
                  SIGI+VINT I TGDDCISLGDGSQQVTITNVTC PG+G SVGSLGRY+GETPVQGV A+NCTLINTTN             G   D+HF
Subjt:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF

Query:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT
        +D++MVNV                    P KVKISNVSF  IRGT AN LAV+F+CS+QFPCEDIEV DINLTY GS GPI+S CKNVKP +SG+QN H 
Subjt:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT

Query:  CSSLASSAS
        C S A S S
Subjt:  CSSLASSAS

XP_031741743.1 LOW QUALITY PROTEIN: exopolygalacturonase [Cucumis sativus]5.2e-8256.68Show/hide
Query:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS-------
        +LQAP+DL G++WISFQ IDQFTLTG GV DGQ KVAWGKNDC+KNP C K PI                             C++    H +       
Subjt:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS-------

Query:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF
                  S+GI+VINT IGTGDDCISLGDGSQQVTITNVTC PG+G SVGSLGRY+GETPVQGVRA+NCTLINTTN             G   D+HF
Subjt:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF

Query:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT
        +D++MVNV                    P KVKISNVSF  IRGT AN LAV+F+CS QFPCEDIEV DINLTY GS GPISS CKNVKP VSGIQN   
Subjt:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT

Query:  CSSLASS
        C SLA S
Subjt:  CSSLASS

XP_038889253.1 exopolygalacturonase-like [Benincasa hispida]1.2e-8357.14Show/hide
Query:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSH---------
        +L+API+L GEHWISFQYIDQFTLTG GV DGQ KVAWGKNDC KN KC K PI                             C++    H         
Subjt:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSH---------

Query:  --------RSSIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF
                  SIGI+V NTNI TGDDCISLGDGS+QVTITN+TCGPG+G SVGSLG+Y+ E PVQGV A+NCTLINTTN             GT  DMHF
Subjt:  --------RSSIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF

Query:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT
        +D++MVNV                    P KVKIS+VSFK IRGT ANALAVNF+CS+QFPCEDIEVADINLTY GS GPISSQCKNVKPI SGIQ+   
Subjt:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT

Query:  CSSLASSA
        CSS +S+A
Subjt:  CSSLASSA

TrEMBL top hitse value%identityAlignment
A0A1S3CPS4 exopolygalacturonase-like3.1e-8055.63Show/hide
Query:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS-------
        +LQAP DL  ++WISF+YIDQFTLTG GV DGQ KVAWGKNDC  NPKC K  I                             C++    + +       
Subjt:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS-------

Query:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF
                  SIGI+VINTNIGTGDDCISLGDGSQQV ITNVTCGPG+G SVGSLGRY+GE PVQG+RA+NCTLINTTN            +G   D+HF
Subjt:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF

Query:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT
        +D++MVNV                    P KVKISNVSF  IRGT ANALAV+F+CS+QFPCEDI+V DINLTY GS  PISS CK VKPIVSGIQN   
Subjt:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT

Query:  CSSLASSASPP
        CSSL SS S P
Subjt:  CSSLASSASPP

A0A5A7T7B3 Exopolygalacturonase-like3.6e-6547.08Show/hide
Query:  LQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS--------
        LQAP DLTGE W+ F+YID  ++T  GV DGQ K AW  NDCDKNPKC + P+                             C +    H +        
Subjt:  LQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS--------

Query:  ---------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFD
                 S+GI+++NTNIGTGDDCISLGDGS+QVTITNVTCGPG+G SVGSLGRY  E PV+G++ +NCTL  TTN             G   DMH++
Subjt:  ---------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFD

Query:  DMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC
        D+VM NV                    P KVKIS VSFK IRGT  NA AV  +CS+  PC+ +E+ADI+LTY GS+GPI+S+C NVKP VSG QN   C
Subjt:  DMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC

Query:  SSLASSAS
        +S A+  S
Subjt:  SSLASSAS

A0A5A7VFS7 Exopolygalacturonase-like1.8e-8056.27Show/hide
Query:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRW----------NS
        +LQAP DL  ++WISF+YIDQFTLTG GV DGQ KVAWGKNDC  NPKC K  I                             C++            NS
Subjt:  MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRW----------NS

Query:  HRS-------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF
          +       SIGI+VINTNIGTGDDCISLGDGSQQV ITNVTCGPG+G SVGSLGRY+GE PVQG+RA+NCTLINTTN            +G   D+HF
Subjt:  HRS-------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHF

Query:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT
        +D++MVNV                    P KVKISNVSF  IRGT ANALAV+F+CS+QFPCEDI+V DINLTY GS  PISS CK VKPIVSGIQN   
Subjt:  DDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHT

Query:  CSSLASSASPP
        CSSL SS S P
Subjt:  CSSLASSASPP

A0A6J1DBN7 exopolygalacturonase-like1.9e-6948.87Show/hide
Query:  LQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQ-------------HRW
        LQAPID TGE W++F+YID F+LTG GV DGQ K+AW KNDC +NP C + P+                             C              H  
Subjt:  LQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQ-------------HRW

Query:  NSHRSSIG----IDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFD
        N+    IG    ++V++T IGTGDDCISLGDGS+ VTI NVTCGPG+G SVGSLGRY  E PV+G+  +NCT  NT N             GT  +MH++
Subjt:  NSHRSSIG----IDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFD

Query:  DMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC
        D++MVNV                    P KVKIS VSFK IRG+ ANALAV  ICS+ FPCE +E+ADI+LTY GS+GPI+SQC NVKPI+SG QN   C
Subjt:  DMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC

Query:  SSLASSASPPT
        SS+A  ASPPT
Subjt:  SSLASSASPPT

A0A6J1DUC6 exopolygalacturonase-like5.4e-7751.79Show/hide
Query:  LQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS--------
        +QAPIDLTGE W+ F+YID FTL+G G  DGQ K AW KNDCDKNPKCD+ P+                             C +    H +        
Subjt:  LQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS--------

Query:  ---------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFD
                 S GI++++TNIGTGDDCISLGDGS+QVTITNVTCGPG+G SVGSLGRY  E PV+G+RA NCT++NT+N             GT  DMHF+
Subjt:  ---------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFD

Query:  DMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC
        DM+MVNV                    P KVKIS VSFK +RG+ ANALAV  +CSA+ PCED+EVADI+LTY G++GPISSQCKNVKPI+SG QN   C
Subjt:  DMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC

Query:  SSLASSA
        SS A  A
Subjt:  SSLASSA

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)1.8e-4536.33Show/hide
Query:  LQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPK------------------------------------CDKRPICQHRWNSH
        L+AP D   + G  WI+   ID  T+ G GV DGQ K AW +NDC KN                                      C      + + ++ 
Subjt:  LQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPK------------------------------------CDKRPICQHRWNSH

Query:  RSSI-----------GIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDM
         +SI           G+++INT I TGDDCISLGDGS+ + ITN+TCGPG+G SVGSLGRY  E  V G+  +NCT+  + N            G   +M
Subjt:  RSSI-----------GIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDM

Query:  HFDDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNS
        HF D+ M +V                    P  VK+S +SFK I+GT     AV  +CS  FPC  +E+ADI+LTY G  GP +S C+N+KP + G Q  
Subjt:  HFDDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNS

Query:  HTCSSLASSAS
          CS  A+ A+
Subjt:  HTCSSLASSAS

Q05967 Polygalacturonase1.9e-4236.45Show/hide
Query:  LQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRP-----------------------------ICQH----RWN-----
        L+AP D   L    W++   +DQFT++G G++DGQ   AW   +C ++ KC+K P                              C++    R+N     
Subjt:  LQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRP-----------------------------ICQH----RWN-----

Query:  -------SHRS-SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMH
                H S S  +++ ++N  TGDDCIS+GD ++Q+ IT VTCGPG+G SVGSLG    E PV GV  RNCT  NT N            G V D+H
Subjt:  -------SHRS-SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMH

Query:  FDDMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSH
        F+D+++ NV                    P +VKIS VSF+ I+GT     AV+ + S   PCE IEV DI++TY G +GP  S C+N+KP + G QN  
Subjt:  FDDMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSH

Query:  TCSSLASSAS
         C++ A+S+S
Subjt:  TCSSLASSAS

Q39766 Polygalacturonase6.0e-4133.33Show/hide
Query:  LQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSH-------
        +QAP D       +W+ F  ++ F + G G+ DGQ  +A+ KN C+      K P+                             C++            
Subjt:  LQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSH-------

Query:  ----------RSSIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMH
                    S G+++I ++I TGDDCIS+GDG++ + I  +TCGPG+G S+GSLG++  E PV+G++  NCT+ NT+N            G V ++H
Subjt:  ----------RSSIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMH

Query:  FDDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSH
        F+D+ M NV                   +  KVK+SN+SFK IRGT A   A+ FICS   PC+++E+ADI++ + G++ P +SQC NVKPI  G  N  
Subjt:  FDDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSH

Query:  TCS
         CS
Subjt:  TCS

Q39786 Polygalacturonase1.2e-4133.66Show/hide
Query:  LQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSH-------
        +QAP D       +W+ F  ++ F + G G+ DGQ  +A+ KN C+      K P+                             C++            
Subjt:  LQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSH-------

Query:  ----------RSSIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMH
                    S G+++I ++I TGDDCIS+GDG++ + I  +TCGPG+G S+GSLG++  E PV+G++  NCT+ NT+N            G V ++H
Subjt:  ----------RSSIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMH

Query:  FDDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSH
        F+D+ M NV                   +  KVK+SN+SFK IRGT A   A+ FICS   PC+++E+ADI++ + G++ P +SQC NVKPI SG  N  
Subjt:  FDDMVMVNV-------------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSH

Query:  TCS
         CS
Subjt:  TCS

Q6H9K0 Exopolygalacturonase (Fragment)2.6e-4434.9Show/hide
Query:  MLQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS----
        +++AP D      + W+SF  ID  T++G G +DGQ + AW KN+CDKNP C    +                             C+     H +    
Subjt:  MLQAPID---LTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI-----------------------------CQHRWNSHRS----

Query:  -------------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDM
                     S G+ + NT I TGDDCIS+G GSQ VTIT V CGPG+G S+GSLGRY  E  V+G+  + CT   T N            G   D+
Subjt:  -------------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDM

Query:  HFDDMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQ
         F D+ M NV+                   P ++K+SN++F  IRGT    +AV   CS   PC ++++ +INL+Y+G+ GP +S C NVKP  SG Q
Subjt:  HFDDMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQ

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein4.7e-4133.78Show/hide
Query:  EHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPICQH----------------RWNSHRS------------------------------
        E W+ F  ID F L G G  DG+   AW  N+C K  +C K PI                     N H +                              
Subjt:  EHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPICQH----------------RWNSHRS------------------------------

Query:  SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFDDMVMVNV--
        S G+ ++N+ I TGDDCIS+GDG + + +  VTCGPG+G SVGSLGRY  E  V G++  NCTL  T N              T  D+HF+D+++ +V  
Subjt:  SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFDDMVMVNV--

Query:  -----------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTCSSLAS
                         K   +K+ N+SFK IRGT  N  AV  +CS  +PC+++E+ DI++ Y G+DGP +  C NV P + G Q+   CS+ A+
Subjt:  -----------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTCSSLAS

AT3G07830.1 Pectin lyase-like superfamily protein1.9e-4233.79Show/hide
Query:  EHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPICQH----------------RWNSHRS------------------------------
        E W+ FQ +D F L G G  DG+   AW  N+C K  +C K PI                     N H +                              
Subjt:  EHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPICQH----------------RWNSHRS------------------------------

Query:  SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFDDMVMVNV--
        S+G+ +IN+ I TGDDC+S+GDG   + + NV CGPG+G SVGSLGRY  E  V G+R  NCTL  T N              T  ++HF+++++ NV  
Subjt:  SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFDDMVMVNV--

Query:  -----------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTCSS
                         K   +K++N+SF++IRGT  N  AV  +CS  +PCE+++V DIN+ Y G+DGP +  C NV+P + G Q    C++
Subjt:  -----------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTCSS

AT3G07850.1 Pectin lyase-like superfamily protein2.3e-4034.21Show/hide
Query:  APIDLTGEH--WISFQYIDQFTLTG-IGVVDGQRKVAWGKNDCDKNPKCDKRPI-------CQHRWNSHRS-----------------------------
        A +  T  H  WI F+ I  FTL G   + DGQ  +AW  NDC K  KC+  PI          + NS  S                             
Subjt:  APIDLTGEH--WISFQYIDQFTLTG-IGVVDGQRKVAWGKNDCDKNPKCDKRPI-------CQHRWNSHRS-----------------------------

Query:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMHFD
                  S G+++I   I TGDDC+S+GDG++ + + NV CGPG+G S+GSLGRY  E PV+GV  R C + NT N            G   ++ F+
Subjt:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMHFD

Query:  DMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC
        D+ M NV                    P +VK+S+V+ K I+GT A  +AV  +CS   PC +I ++DINL + G +GP  S C N+KPI+SG      C
Subjt:  DMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC

Query:  SSLA
        + +A
Subjt:  SSLA

AT3G14040.1 Pectin lyase-like superfamily protein8.1e-4134.21Show/hide
Query:  APIDLTGEH--WISFQYIDQFTLTG-IGVVDGQRKVAWGKNDCDKNPKCDKRPI-------CQHRWNSHRS-----------------------------
        A +  T  H  WI F+ +  FTL G   + DGQ  +AW  NDC K  KC+  PI          + NS  S                             
Subjt:  APIDLTGEH--WISFQYIDQFTLTG-IGVVDGQRKVAWGKNDCDKNPKCDKRPI-------CQHRWNSHRS-----------------------------

Query:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMHFD
                  S G+++I   I TGDDC+S+GDG++ + + NV CGPG+G S+GSLGRY  E PV+GV  R C + NT N            G   ++ F+
Subjt:  ----------SIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN-----------VGTVFDMHFD

Query:  DMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC
        D+ M NV                    P KVK+S+V+ K I+GT A  +AV  +CS   PC +I ++DINL + G +GP  S C N+KPI+SG      C
Subjt:  DMVMVNVK-------------------PLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTC

Query:  SSLA
        + +A
Subjt:  SSLA

AT5G48140.1 Pectin lyase-like superfamily protein7.8e-4435.15Show/hide
Query:  EHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI----------------CQHRWNSHRSSI----------------------------
        E W++F+ I+ F L G GV DG+   AW  N+C K   C K PI                     + H + I                            
Subjt:  EHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPI----------------CQHRWNSHRSSI----------------------------

Query:  --GIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFDDMVMVNV--
          GI +IN+ I TGDDC+S+GDG + + +  VTCGPG+G S+GSLGRY  E  V G++  NCTL  T N              T  D+HF+++++ NV  
Subjt:  --GIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLGRYIGETPVQGVRARNCTLINTTN------------VGTVFDMHFDDMVMVNV--

Query:  -----------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTCSS
                         KP  +K++N+SFKKIRGT  N  AV  +CS  +PC+++EV D+N+ Y G+DGP + QC NV P + G Q    CSS
Subjt:  -----------------KPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQNSHTCSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAAGCTCCCATAGATCTTACCGGAGAACATTGGATTAGTTTCCAATATATCGATCAGTTTACATTAACAGGTATAGGAGTCGTTGATGGGCAAAGAAAAGTAGC
TTGGGGAAAAAATGATTGTGACAAAAACCCAAAGTGCGACAAACGTCCTATATGCCAACACAGATGGAATTCACATCGGTCTTCGATTGGGATTGATGTTATAAATACAA
ATATTGGTACTGGAGATGACTGTATCTCACTTGGAGATGGTAGTCAACAAGTAACAATCACTAACGTAACATGCGGGCCTGGATATGGTAAAAGTGTAGGAAGTTTGGGA
AGGTATATTGGTGAAACACCCGTTCAAGGAGTCAGAGCTAGGAACTGTACATTGATAAATACAACTAATGTTGGAACCGTTTTTGATATGCATTTCGACGACATGGTAAT
GGTCAATGTCAAACCATTGAAAGTCAAGATTAGCAATGTTAGTTTCAAGAAGATCAGAGGTACTGTGGCGAACGCACTTGCAGTCAATTTTATTTGCAGTGCGCAATTTC
CATGTGAAGATATAGAGGTAGCTGACATTAACCTCACTTATAAAGGAAGTGACGGTCCTATTTCATCTCAATGTAAAAATGTGAAGCCCATCGTTTCGGGAATACAAAAC
TCGCATACTTGTTCTTCCCTTGCTTCAAGTGCTTCTCCACCTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAAGCTCCCATAGATCTTACCGGAGAACATTGGATTAGTTTCCAATATATCGATCAGTTTACATTAACAGGTATAGGAGTCGTTGATGGGCAAAGAAAAGTAGC
TTGGGGAAAAAATGATTGTGACAAAAACCCAAAGTGCGACAAACGTCCTATATGCCAACACAGATGGAATTCACATCGGTCTTCGATTGGGATTGATGTTATAAATACAA
ATATTGGTACTGGAGATGACTGTATCTCACTTGGAGATGGTAGTCAACAAGTAACAATCACTAACGTAACATGCGGGCCTGGATATGGTAAAAGTGTAGGAAGTTTGGGA
AGGTATATTGGTGAAACACCCGTTCAAGGAGTCAGAGCTAGGAACTGTACATTGATAAATACAACTAATGTTGGAACCGTTTTTGATATGCATTTCGACGACATGGTAAT
GGTCAATGTCAAACCATTGAAAGTCAAGATTAGCAATGTTAGTTTCAAGAAGATCAGAGGTACTGTGGCGAACGCACTTGCAGTCAATTTTATTTGCAGTGCGCAATTTC
CATGTGAAGATATAGAGGTAGCTGACATTAACCTCACTTATAAAGGAAGTGACGGTCCTATTTCATCTCAATGTAAAAATGTGAAGCCCATCGTTTCGGGAATACAAAAC
TCGCATACTTGTTCTTCCCTTGCTTCAAGTGCTTCTCCACCTACTTAA
Protein sequenceShow/hide protein sequence
MLQAPIDLTGEHWISFQYIDQFTLTGIGVVDGQRKVAWGKNDCDKNPKCDKRPICQHRWNSHRSSIGIDVINTNIGTGDDCISLGDGSQQVTITNVTCGPGYGKSVGSLG
RYIGETPVQGVRARNCTLINTTNVGTVFDMHFDDMVMVNVKPLKVKISNVSFKKIRGTVANALAVNFICSAQFPCEDIEVADINLTYKGSDGPISSQCKNVKPIVSGIQN
SHTCSSLASSASPPT