CuGenDBv2

Gene ID	ClCG09G022280
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	60S ribosomal export protein NMD3
Genome location	CG_Chr09:39311115..39315988
RNA-Seq Expression	ClCG09G022280
Synteny	ClCG09G022280
Gene Ontology terms	GO:0000055 - ribosomal large subunit export from nucleus (biological process) GO:0015031 - protein transport (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR007064 - Nmd3, N-terminal IPR039768 - Ribosomal export protein Nmd3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036240.1 60S ribosomal export protein NMD3 [Cucumis melo var. makuwa]

6.1e-224

80.43

Show/hide

Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MA E GLFAV QTIG+VLCCKCGIP+ PNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRL+NL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVLHGAILEQSY++ YV+QDH CESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEF+G                  KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL PFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSN+MELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR
        LIKKSYEEK QRKRGKPRS  LK + M                  +FLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSE + 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR

Query:  DDGMHE
        DD M+E
Subjt:  DDGMHE

XP_008440695.1 PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo]

6.1e-224

80.43

Show/hide

Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MA E GLFAV QTIG+VLCCKCGIP+ PNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRL+NL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVLHGAILEQSY++ YV+QDH CESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEF+G                  KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL PFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSN+MELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR
        LIKKSYEEK QRKRGKPRS  LK + M                  +FLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSE + 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR

Query:  DDGMHE
        DD M+E
Subjt:  DDGMHE

XP_022149109.1 60S ribosomal export protein NMD3 [Momordica charantia]

9.4e-225

81.23

Show/hide

Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MAGEAGLFAV QTIGSVLCCKCGIP+APNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVL+GAILEQSY+  YV+QDH CESCSRVQANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEF+G                  KSNIHNHKHTFSVEI PICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALL PFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEYI+LDIENVS EVNVGGSKY+LADAQV RVSDFGRNDTIF IRTHLGHILNPGDYALGYDLY ANSN+MEL+KYKGL LPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR
        L+KKSYEEK QRKRGKPR+  LK + M                  +FLRDLEENPD+RFNISLYRNREYQ SEMTDGE DGPSVPLEELLADLDLSE D 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR

Query:  DDGMHE
        DDGM+E
Subjt:  DDGMHE

XP_038883907.1 60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida]

1.8e-223

80.87

Show/hide

Query:  SMAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL--------
        SMA E GLFAV QTIGSVLCCKCGIP+APNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL        
Subjt:  SMAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL--------

Query:  -----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDF
                   IKVKLKVQKEVLHGAILEQSY++ YV+QDH CESCSRVQANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDF
Subjt:  -----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDF

Query:  FFSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDAD
        FFSNRSHGVKFVEFIG                  KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL PFTLRHCFLDA+
Subjt:  FFSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDAD

Query:  QYWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEA
        QYWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV R+SDFGRNDTIF I+THLGHILNPGDYALGYDLYGANSN+MELEKYKGLELP+A
Subjt:  QYWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEA

Query:  ILIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESD
        ILIKKSYEEK  RKRGKPR+  LK + M                  +FLRDLEENPD+RFNISLYRNREYQPSEMTDGE DGPSVPLEELLADLDLSE +
Subjt:  ILIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESD

Query:  RDDGMHE
         D+ M E
Subjt:  RDDGMHE

XP_038883908.1 60S ribosomal export protein NMD3 isoform X2 [Benincasa hispida]

5.1e-223

80.83

Show/hide

Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MA E GLFAV QTIGSVLCCKCGIP+APNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVLHGAILEQSY++ YV+QDH CESCSRVQANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEFIG                  KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL PFTLRHCFLDA+Q
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV R+SDFGRNDTIF I+THLGHILNPGDYALGYDLYGANSN+MELEKYKGLELP+AI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR
        LIKKSYEEK  RKRGKPR+  LK + M                  +FLRDLEENPD+RFNISLYRNREYQPSEMTDGE DGPSVPLEELLADLDLSE + 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR

Query:  DDGMHE
        D+ M E
Subjt:  DDGMHE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B197 60S ribosomal export protein NMD3

2.9e-224

80.43

Show/hide

Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MA E GLFAV QTIG+VLCCKCGIP+ PNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRL+NL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVLHGAILEQSY++ YV+QDH CESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEF+G                  KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL PFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSN+MELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR
        LIKKSYEEK QRKRGKPRS  LK + M                  +FLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSE + 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR

Query:  DDGMHE
        DD M+E
Subjt:  DDGMHE

A0A5A7SYS9 60S ribosomal export protein NMD3

2.9e-224

80.43

Show/hide

Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MA E GLFAV QTIG+VLCCKCGIP+ PNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRL+NL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVLHGAILEQSY++ YV+QDH CESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEF+G                  KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL PFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSN+MELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR
        LIKKSYEEK QRKRGKPRS  LK + M                  +FLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSE + 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR

Query:  DDGMHE
        DD M+E
Subjt:  DDGMHE

A0A5D3CM67 60S ribosomal export protein NMD3

2.9e-224

80.43

Show/hide

Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MA E GLFAV QTIG+VLCCKCGIP+ PNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRL+NL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVLHGAILEQSY++ YV+QDH CESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEF+G                  KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALL PFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSN+MELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR
        LIKKSYEEK QRKRGKPRS  LK + M                  +FLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSE + 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR

Query:  DDGMHE
        DD M+E
Subjt:  DDGMHE

A0A6J1D613 60S ribosomal export protein NMD3

4.5e-225

81.23

Show/hide

Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MAGEAGLFAV QTIGSVLCCKCGIP+APNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVL+GAILEQSY+  YV+QDH CESCSRVQANPDQWVASVQLRQHV HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEF+G                  KSNIHNHKHTFSVEI PICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALL PFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEYI+LDIENVS EVNVGGSKY+LADAQV RVSDFGRNDTIF IRTHLGHILNPGDYALGYDLY ANSN+MEL+KYKGL LPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR
        L+KKSYEEK QRKRGKPR+  LK + M                  +FLRDLEENPD+RFNISLYRNREYQ SEMTDGE DGPSVPLEELLADLDLSE D 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-----------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSESDR

Query:  DDGMHE
        DDGM+E
Subjt:  DDGMHE

A0A6J1FIM4 60S ribosomal export protein NMD3

3.2e-223

79.72

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Query:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------
        MAGE GLF V QTIGSVLCCKCGIP+APNAANMCVKCLCSE+DITEGLQKQ TIMHCPDCESYLQPPRTWIKAQLESK+LLTFCIKRLKNL         
Subjt:  MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL---------

Query:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
                  IKVKLKVQKEVLHGA+LEQSY++ YV+QDH CESCSRVQANPDQWVASVQLRQHV HRRTFFFLEQLILKH AAA AIRIKQMDQGIDFF
Subjt:  ----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ
        FSNRSHGVKFVEFIG                  KSN+HN+KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALL P TLRHCFLDA+Q
Subjt:  FSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI
        YWRTSF+ LLTSRQLVEYIVLDIENVSTEVNV GSKYILADAQ+ RVSDFGRNDTIF IRTHLGHILNPGDYALGYDLY ANSN+MELEKYKGL+LPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAI

Query:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-------------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSES
        LIKKSYEEK QRKRGKPRS  LK + M                    +FLRDLEENPD+RFNISLYRNREYQPSEMTDGE DGPSVPLEELLADLDLSE 
Subjt:  LIKKSYEEKCQRKRGKPRSCLLKWMLM-------------------IKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSES

Query:  DRDDGMHE
        D D+GMHE
Subjt:  DRDDGMHE

SwissProt top hits

e value

%identity

Alignment

Q08DS5 60S ribosomal export protein NMD3

3.6e-94

38.37

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Query:  VHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK--------------------
        V  T G +LCC CG+PI+PN AN+CV CL S++DI++G+ KQ +I  C  C+ Y QPP TW++  LES++LL  C+K++K                    
Subjt:  VHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK--------------------

Query:  NLIKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGV
          +KVKL +QKEV++GAIL+Q +++ YV+Q   C  C RV+A  D W A VQ+RQ   H++TF++LEQLILK+G     +RIK++  G+DF++S++ H  
Subjt:  NLIKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGV

Query:  KFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRS
        K VEF+                    SN +N+K TFSVEI PIC+++++CL PK+A SLGN+  + +C +VT+ I L+ P TL+   +D + +W   F S
Subjt:  KFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRS

Query:  LLTSRQLVEYIVLD---IENVSTEVNVG--GSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIK
        L   +QL E+IV++   ++++      G    K+ L +  V + S+    D  +F RTHLGH+LNPGD  LG+DL   N N+  + K K   +P+ +LIK
Subjt:  LLTSRQLVEYIVLD---IENVSTEVNVG--GSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIK

Query:  KSYEEKCQRKRGKPRSCLLKWMLMIK-------------FLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE
        KSY+   + +R + R+  LK +   +             FL DLEE+  +R N+++YR+    P E    ++  P + L E+L DL +S+
Subjt:  KSYEEKCQRKRGKPRSCLLKWMLMIK-------------FLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE

Q5BLF0 60S ribosomal export protein NMD3

1.7e-96

39.63

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Query:  GSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK--------------------NLIKV
        G++LCC CG+PI PN ANMCV CL +++DI+EG+ KQ TI  C  CE YLQPP +W++  LES+ELL  C+K+LK                      IK+
Subjt:  GSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK--------------------NLIKV

Query:  KLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF
        KL +QKEV++GAIL+Q + + +V+Q   CE C RV+A  D W A VQ+RQ   H++TF++LEQLILKH      +RIK++ +GIDF+++ + H  K V+F
Subjt:  KLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF

Query:  IG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSR
        +                    SN +N+K TFSVEI P+C+++++CL P++A SLGN+G + +C +VT++I L+ P TL+   +D   +WR  F SL + R
Subjt:  IG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSR

Query:  QLVEYIVLDIENVSTE-----VNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEE
        QL E+I++DI+ +  +       +  +K+ LA+  V + S+   +   +  RT +GH+LN GD  LG+D   AN N+  L K     +P+ +LIKKSY+ 
Subjt:  QLVEYIVLDIENVSTE-----VNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEE

Query:  KCQRKRGKPRSCLLKWM-------------LMIKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDG-PSVPLEELLADLDLSESDRDDG
          + KR + R   LK M                +FL DLEE+  +R NI+++R+    P E +D +DDG P + L E+L DL LS++   +G
Subjt:  KCQRKRGKPRSCLLKWM-------------LMIKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDG-PSVPLEELLADLDLSESDRDDG

Q6GNS3 60S ribosomal export protein NMD3

1.6e-97

40.41

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Query:  GSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK-NL-------------------IKV
        G++LCC+CGIPI PN ANMCV CL +++DI+EG+ KQ ++  C  CE YLQPP TWI+  LES+ELLT C+K+LK NL                   +KV
Subjt:  GSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK-NL-------------------IKV

Query:  KLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF
        KL +QKEV++GAIL+Q +++ YV+Q   C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH      +R+K++  G+DF+++++ HG K VEF
Subjt:  KLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF

Query:  IG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSR
        +                    +N +N+K TFSVEI P+C+++L+CL PK+A SLGN+  + IC +VT+ I L+ P TL+   +D + YWR  F SL   +
Subjt:  IG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSR

Query:  QLVEYIVLDIENVSTEVNVGG-----SKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEE
        Q+ E+IV+D E +       G     +K++LA+  V + S+       +  RTHLGH+LNPGD  LG+DL   N N+  + K     +P+ +LIKKSY+ 
Subjt:  QLVEYIVLDIENVSTEVNVGG-----SKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEE

Query:  KCQRKRGKPRSCLLKWMLMIK-------------FLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE
          + +R + R+  LK M   +             FL DLEE+  +R N+++++N    P E    E+  P + L E+L DL +S+
Subjt:  KCQRKRGKPRSCLLKWMLMIK-------------FLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE

Q6P2Z6 60S ribosomal export protein NMD3

1.2e-97

40.7

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Query:  GSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK-NL-------------------IKV
        G++LCC+CGIPI PN ANMCV CL  ++DI+EG+ KQ ++  C  CE YLQPP TWI+  LES+ELLT C+K+LK NL                   +KV
Subjt:  GSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK-NL-------------------IKV

Query:  KLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF
        KL +QKEV++GAIL+Q +++ Y++Q   C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH      +R+K++  G+DF+++++ H  K VEF
Subjt:  KLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF

Query:  IG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSR
        +                    +N +N+K TFSVEI P+C+++L+CL PK+A SLGN+  + IC +VT+ I L+ P TL+   +D + YWR+ F SL   +
Subjt:  IG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSR

Query:  QLVEYIVLDIENVSTEVNVGG-----SKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEE
        QL E+IV+D + V       G     +K+ILA+  V + S+       +  RTHLGH+LNPGD  LG+DL   N N+  + K     +P+ +LIKKSY+ 
Subjt:  QLVEYIVLDIENVSTEVNVGG-----SKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEE

Query:  KCQRKRGKPRSCLLKWMLMIK-------------FLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLS
          + KR + R+  LK +   +             FL DLEE+  +R N+++Y+N    P E    E+  P + L E+L DL +S
Subjt:  KCQRKRGKPRSCLLKWMLMIK-------------FLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLS

Q96D46 60S ribosomal export protein NMD3

4.7e-94

38.76

Show/hide

Query:  GSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK--------------------NLIKV
        G +LCC+CG+PI+PN AN+CV CL S++DI++G+ KQ +I  C  C+ Y QPP TWI+  LES+ELL  C+K++K                      +KV
Subjt:  GSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLK--------------------NLIKV

Query:  KLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF
        KL +QKEV++GAIL+Q +++ YV+Q   C  C RV+A  D W A +Q+RQ   H++TF++LEQLILK+G     +RIK++  G+DF++S++ H  K VEF
Subjt:  KLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF

Query:  IG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSR
        +                    SN +N+K TFSVEI PIC+++++CL PK+A SLGN+  + +C +VT+AI L+ P TL+   +D   +W   F SL   +
Subjt:  IG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSR

Query:  QLVEYIVLD---IENVSTEVNVG--GSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEE
        QL E+IV++   ++++      G    K+ L +  V + S+    D  +F RTHLGH+LNPGD  LG+DL   N N+  + K     +P+ +LIKKSY+ 
Subjt:  QLVEYIVLD---IENVSTEVNVG--GSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEE

Query:  KCQRKRGKPRSCLLKWMLMIK-------------FLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE
          + KR + R+  LK +   +             FL DLEE+  +R N+++YR+    P E    ++  P + L E+L DL +S+
Subjt:  KCQRKRGKPRSCLLKWMLMIK-------------FLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE

Arabidopsis top hits

e value

%identity

Alignment

AT2G03820.1 nonsense-mediated mRNA decay NMD3 family protein

6.4e-163

Show/hide

Query:  SMAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL--------
        S+  E+G+F V QTIGSVLCCKCG+P+APNAANMCV CL SE+DITEGLQK   I +CP+C  YLQPP+TWIK Q ESKELLTFCIKRLKNL        
Subjt:  SMAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNL--------

Query:  -----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDF
                   IKVKL VQ EVL+GA+LEQSY + Y ++D+ CESCSR QANPDQWVAS+QLRQHVSHRRTFF+LEQLIL+H AA+RAIRI+Q+DQGIDF
Subjt:  -----------IKVKLKVQKEVLHGAILEQSYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDF

Query:  FFSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDAD
        FF N+SH   FVEF+                   KS+++N+K+T+SV+I P+CREDL+CLP KVA  LGNLGPLV+CTKV++ I LL P TLR  FLDA 
Subjt:  FFSNRSHGVKFVEFIG------------------KSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDAD

Query:  QYWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYK---GLEL
        QYWR+ FRS LTSRQLV+Y V D+E    E  VGG KY L+  Q+ R SD G+   +F+++THLGHIL PGD ALGYD+YGAN N+ E+EKY+      L
Subjt:  QYWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNNMELEKYK---GLEL

Query:  PEAILIKKSYEEKCQRKRGKPRSCLLKWMLM------------------IKFLRDLEENPDMRFNISLYRNREYQPSE---MTDGEDDGPSVPLEELLAD
        PEAILIKK YEE+ +RK+ K R+  LK + M                   +FLRDLEENP++RFNISLYR+++YQ SE   MTDGE   PSVP+EELLAD
Subjt:  PEAILIKKSYEEKCQRKRGKPRSCLLKWMLM------------------IKFLRDLEENPDMRFNISLYRNREYQPSE---MTDGEDDGPSVPLEELLAD

Query:  LDLSESDRDD
        LDLS  + DD
Subjt:  LDLSESDRDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTGGAGAAGCAGGGTTGTTTGCAGTTCACCAGACCATTGGCAGTGTCTTATGTTGCAAATGTGGAATCCCCATTGCACCAAATGCTGCCAATATGTGTGTCAAGTG
CTTGTGTTCTGAAATTGACATAACAGAAGGTTTACAGAAGCAATCGACTATTATGCATTGTCCAGATTGCGAGAGTTACTTGCAGCCGCCCCGAACTTGGATTAAAGCAC
AATTAGAATCGAAAGAACTGCTGACCTTCTGTATCAAAAGGTTAAAGAATCTGATCAAGGTCAAATTAAAGGTTCAGAAAGAGGTCCTTCATGGAGCAATATTGGAACAA
TCCTACATTATTGTGTATGTTTTACAGGATCACTCGTGTGAGTCCTGCTCAAGAGTCCAGGCCAACCCTGACCAATGGGTGGCTTCTGTTCAACTCAGGCAGCACGTCTC
GCACCGGCGTACATTTTTCTTCTTGGAGCAACTGATACTCAAGCACGGTGCTGCTGCTCGCGCAATAAGAATCAAACAGATGGATCAAGGTATTGACTTCTTCTTTTCTA
ATAGGAGTCATGGTGTTAAGTTTGTGGAATTTATTGGAAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGCGAGGATTTGATA
TGTTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATCTTGGTCCTCTTGTAATTTGCACTAAAGTTACAAATGCCATTGCTTTACTTTATCCATTCACCTTAAGGCACTG
TTTCTTGGATGCTGATCAGTATTGGAGGACATCTTTTAGGTCTCTACTTACTAGCAGGCAACTTGTGGAATATATTGTATTGGATATAGAGAATGTTTCTACTGAAGTCA
ATGTTGGTGGATCAAAGTATATTTTGGCTGATGCTCAAGTAACTCGTGTATCGGATTTTGGAAGGAATGACACAATATTCTTCATAAGAACCCATCTAGGACATATTCTA
AACCCGGGGGATTATGCCCTTGGTTATGATCTCTATGGAGCCAATAGTAATAATATGGAGCTTGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCAATTTTAATCAAGAA
AAGTTACGAAGAAAAGTGTCAGAGAAAGCGTGGAAAGCCTAGATCATGTCTCTTGAAATGGATGTTGATGATAAAGCTTTCACGTTCAGCCACCCCATCCCTCCCATTAC
CGGCCACTGCACCGCCGCACGCTGCACTCTCAGCTGCCGTAGTCTCAGCCTTCCTGCGAGATCTCTGCCGCGCCCTCCCCCTCACACTCTCTCCGAGCAATCAGAGTATG
GCTGGAGAAGCAGGGTTGTTTGCAGTTCACCAGACCATTGGCAGTGTCTTATGTTGCAAATGTGGAATCCCCATTGCACCAAATGCTGCCAATATGTGTGTCAAGTGCTT
GTGTTCTGAAATTGACATAACAGAAGGTTTACAGAAGCAATCGACTATTATGCATTGTCCAGATTGCGAGAGTTACTTGCAGCCGCCCCGAACTTGGATTAAAGCACAAT
TAGAATCGAAAGAACTGCTGACCTTCTGTATCAAAAGGTTAAAGAATCTGATCAAGGTCAAATTAAAGGTTCAGAAAGAGGTCCTTCATGGAGCAATATTGGAACAATCC
TACATTATTGTGTATGTTTTACAGGATCACTCGTGTGAGTCCTGCTCAAGAGTCCAGGCCAACCCTGACCAATGGGTGGCTTCTGTTCAACTCAGGCAGCACGTCTCGCA
CCGGCGTACATTTTTCTTCTTGGAGCAACTGATACTCAAGCACGGTGCTGCTGCTCGCGCAATAAGAATCAAACAGATGGATCAAGGTATTGACTTCTTCTTTTCTAATA
GGAGTCATGGTGTTAAGTTTGTGGAATTTATTGGAAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGCGAGGATTTGATATGT
TTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATCTTGGTCCTCTTGTAATTTGCACTAAAGTTACAAATGCCATTGCTTTACTTTATCCATTCACCTTAAGGCACTGTTT
CTTGGATGCTGATCAGTATTGGAGGACATCTTTTAGGTCTCTACTTACTAGCAGGCAACTTGTGGAATATATTGTATTGGATATAGAGAATGTTTCTACTGAAGTCAATG
TTGGTGGATCAAAGTATATTTTGGCTGATGCTCAAGTAACTCGTGTATCGGATTTTGGAAGGAATGACACAATATTCTTCATAAGAACCCATCTAGGACATATTCTAAAC
CCGGGGGATTATGCCCTTGGTTATGATCTCTATGGAGCCAATAGTAATAATATGGAGCTTGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCAATTTTAATCAAGAAAAG
TTACGAAGAAAAGTGTCAGAGAAAGCGTGGAAAGCCTAGATCATGTCTCTTGAAATGGATGTTGATGATAAAGTTTTTGAGAGATTTGGAGGAGAATCCAGATATGAGGT
TCAACATATCATTGTATCGAAATAGGGAATACCAACCATCTGAAATGACTGATGGAGAAGATGATGGACCTTCGGTACCACTTGAAGAGTTGCTTGCTGATCTTGATCTA
AGTGAAAGTGATAGAGATGATGGCATGCACGAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNLIKVKLKVQKEVLHGAILEQ
SYIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKSNIHNHKHTFSVEISPICREDLI
CLPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHIL
NPGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEEKCQRKRGKPRSCLLKWMLMIKLSRSATPSLPLPATAPPHAALSAAVVSAFLRDLCRALPLTLSPSNQSM
AGEAGLFAVHQTIGSVLCCKCGIPIAPNAANMCVKCLCSEIDITEGLQKQSTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNLIKVKLKVQKEVLHGAILEQS
YIIVYVLQDHSCESCSRVQANPDQWVASVQLRQHVSHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKSNIHNHKHTFSVEISPICREDLIC
LPPKVAVSLGNLGPLVICTKVTNAIALLYPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILN
PGDYALGYDLYGANSNNMELEKYKGLELPEAILIKKSYEEKCQRKRGKPRSCLLKWMLMIKFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDL
SESDRDDGMHE

ClCG09G022280 (gene) of Watermelon (Charleston Gray) v2.5 genome