CuGenDBv2

Gene ID	ClCG09G022400
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	transcription factor PAR2-like
Genome location	CG_Chr09:39428268..39429199
RNA-Seq Expression	ClCG09G022400
Synteny	ClCG09G022400
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domains	IPR044549 - Transcription factor IBH1-like, bHLH domain IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140253.1 transcription factor PAR2 [Cucumis sativus]

6.2e-51

90.32

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRVPT+RIA+K HRN  V+ SEE DEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCG
        HQVKAMRALSSFFESLEKEKS+CG
Subjt:  HQVKAMRALSSFFESLEKEKSKCG

XP_008449537.1 PREDICTED: transcription factor PAR2-like [Cucumis melo]

2.0e-49

89.6

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTR-IAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRVPT+R IA+K HRN  V+  EEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTR-IAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSKCG
        QHQVKAMRALSSFFESLEKEKS+CG
Subjt:  QHQVKAMRALSSFFESLEKEKSKCG

XP_022968919.1 transcription factor PAR2-like [Cucurbita maxima]

6.0e-38

75.81

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTL  TT SRQK            HRRRSRR+VP T  A+K HRN AV+ S E DEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCG
        HQVKAMRALS+FFESLEKEKS+CG
Subjt:  HQVKAMRALSSFFESLEKEKSKCG

XP_023554716.1 transcription factor PAR2-like [Cucurbita pepo subsp. pepo]

1.2e-38

76.61

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTL  TT SRQK            HRRRSRR+VP T   +K HRN AV+ SEE DEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCG
        HQVKAMRALSSFFESLEKEKS+CG
Subjt:  HQVKAMRALSSFFESLEKEKSKCG

XP_038887982.1 transcription factor PAR1-like [Benincasa hispida]

1.7e-53

95.16

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDK QIQTLKPTTTSRQKTLILNALHKSS  RRRSRRRVPTTRIAEK HRNDAVY SEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCG
        HQVKAMRALSSFFESLEKEKS+CG
Subjt:  HQVKAMRALSSFFESLEKEKSKCG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGU6 Uncharacterized protein

3.0e-51

90.32

Show/hide

Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRVPT+RIA+K HRN  V+ SEE DEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCG
        HQVKAMRALSSFFESLEKEKS+CG
Subjt:  HQVKAMRALSSFFESLEKEKSKCG

A0A1S3BM86 transcription factor PAR2-like

9.7e-50

89.6

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTR-IAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRVPT+R IA+K HRN  V+  EEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTR-IAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSKCG
        QHQVKAMRALSSFFESLEKEKS+CG
Subjt:  QHQVKAMRALSSFFESLEKEKSKCG

A0A5A7V5C4 Transcription factor PAR2-like

9.7e-50

89.6

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTR-IAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRVPT+R IA+K HRN  V+  EEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTR-IAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSKCG
        QHQVKAMRALSSFFESLEKEKS+CG
Subjt:  QHQVKAMRALSSFFESLEKEKSKCG

A0A6J1GL48 transcription factor PAR2-like

2.9e-38

75.81

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTL  TT SRQK            HRRRSRR+VP T   +K HRN AV+  EE DEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCG
        HQVKAMRALSSFFESLEKEKS+CG
Subjt:  HQVKAMRALSSFFESLEKEKSKCG

A0A6J1I119 transcription factor PAR2-like

2.9e-38

75.81

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Query:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTL  TT SRQK            HRRRSRR+VP T  A+K HRN AV+ S E DEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCG
        HQVKAMRALS+FFESLEKEKS+CG
Subjt:  HQVKAMRALSSFFESLEKEKSKCG

SwissProt top hits

e value

%identity

Alignment

Q9LXR7 Transcription factor PAR2

1.7e-11

40.52

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Query:  QKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHR--NDAVYPSEEAD------EKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA
        +KTL  +   +SSP    S     +T    +  +  +DA     E D      ++E VE KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ 
Subjt:  QKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHR--NDAVYPSEEAD------EKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA

Query:  LSSFFESLEKEKSKCG
        L++F E  EK+  K G
Subjt:  LSSFFESLEKEKSKCG

Q9SJH0 Transcription factor PAR1

5.9e-12

41.38

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Query:  PTTTSRQKTLILNALHKS--SPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA
        P  T R  +   +A  KS  +   RR++RR+  T  + +  R +A    EE DE   V+ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ 
Subjt:  PTTTSRQKTLILNALHKS--SPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA

Query:  LSSFFESLEKEKSKCG
        L+SF + +++E  K G
Subjt:  LSSFFESLEKEKSKCG

Arabidopsis top hits

e value

%identity

Alignment

AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

4.7e-04

43.48

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Query:  AVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS
        AVERK++ L  +VPG   + V  L ++  +YI  L+ QV+AM AL+
Subjt:  AVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS

AT2G42870.1 phy rapidly regulated 1

4.2e-13

41.38

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Query:  PTTTSRQKTLILNALHKS--SPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA
        P  T R  +   +A  KS  +   RR++RR+  T  + +  R +A    EE DE   V+ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ 
Subjt:  PTTTSRQKTLILNALHKS--SPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA

Query:  LSSFFESLEKEKSKCG
        L+SF + +++E  K G
Subjt:  LSSFFESLEKEKSKCG

AT3G58850.1 phy rapidly regulated 2

1.2e-12

40.52

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Query:  QKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHR--NDAVYPSEEAD------EKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA
        +KTL  +   +SSP    S     +T    +  +  +DA     E D      ++E VE KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ 
Subjt:  QKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHR--NDAVYPSEEAD------EKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA

Query:  LSSFFESLEKEKSKCG
        L++F E  EK+  K G
Subjt:  LSSFFESLEKEKSKCG

Sequences

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CDS sequence

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ATGGACAAACCTCAAATTCAAACACTCAAACCAACAACCACTTCTCGCCAAAAAACCCTAATCCTCAACGCATTGCACAAATCCTCTCCCCATCGACGCCGTAGCCGGAG
AAGAGTACCGACCACCCGCATTGCCGAGAAATTTCACCGAAACGACGCTGTTTACCCCTCCGAAGAAGCCGATGAGAAGGAAGCCGTCGAACGCAAGATTCGCGCCTTGC
AGAGCATCGTTCCGGGAGGGGAATCGCTTGGAGTCGACAAGCTGTTTGAACAGACGGCGGAGTATATAATGAATTTGCAGCATCAAGTGAAGGCCATGAGAGCACTCTCG
AGCTTTTTCGAGAGCTTGGAGAAGGAGAAATCCAAGTGCGGAGTTGGGAGCAGGATTTCGAATCTTTTCCCTGTTTATGATCATCACCATCATCTTCTTCATGTTCTATA
CTACTTGCTGAAAATTCAAGGAGAAATCAATATTAGTGGGAGACTTGAGAGTAAACGACTCAAGCTTGATTCAGTGGATTTCAAAATAATTCCAAATCTAGATTAA

mRNA sequence

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Protein sequence

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MDKPQIQTLKPTTTSRQKTLILNALHKSSPHRRRSRRRVPTTRIAEKFHRNDAVYPSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS
SFFESLEKEKSKCGVGSRISNLFPVYDHHHHLLHVLYYLLKIQGEINISGRLESKRLKLDSVDFKIIPNLD

ClCG09G022400 (gene) of Watermelon (Charleston Gray) v2.5 genome