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ClCG10G002010 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G002010
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRibosomal protein S4
Genome locationCG_Chr10:2210882..2211392
RNA-Seq ExpressionClCG10G002010
SyntenyClCG10G002010
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR022801 - Ribosomal protein S4/S9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QWQ49878.1 ribosomal protein S4 [Zelkova schneideriana]3.8e-2095Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRNKKRSIKRKIYPRE LNSYIQSQTTRKLPL HGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
YP_009498123.1 ribosomal protein S4 [Senna tora]3.4e-2196.67Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRNKKRSIKRKIYPRE LNSYIQSQTTRKLPLNHGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
YP_009704681.1 ribosomal protein S4 [Tamarindus indica]3.8e-2095Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRNKKRSIKRKIYPRE LNSYIQSQTTRKLPL HGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
YP_009704760.1 ribosomal protein S4 [Haematoxylum brasiletto]3.8e-2095Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRNKKRSIKRKIYPRE LNSYIQSQTTRKLPL HGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
YP_009913620.1 ribosomal protein S4 [Luffa acutangula]1.7e-2095.16Show/hide
Query:  LRNVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        L NVRNRELTIIQRRILRKLRNKKRSIKRKIYPRE LNSYIQSQTTRKLPL HGDLPITEMH
Subjt:  LRNVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
TrEMBL top hitse value%identityAlignment
A0A072TH07 Ribosomal protein S41.8e-2095Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRNKKRSIKRKIYPRE LNSYIQSQTTRKLPL HGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
A0A2Z4HGM2 Ribosomal protein S41.7e-2196.67Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRNKKRSIKRKIYPRE LNSYIQSQTTRKLPLNHGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
A0A385G290 Ribosomal protein S41.8e-2095Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRNKKRSIKRKIYPRE LNSYIQSQTTRKLPL HGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
A0A6A5KZD0 S4 RNA-binding domain-containing protein1.8e-2095Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRNKKRSIKRKIYPRE LNSYIQSQTTRKLPL HGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
A0A7D6BZG8 Ribosomal protein S48.2e-2195.16Show/hide
Query:  LRNVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        L NVRNRELTIIQRRILRKLRNKKRSIKRKIYPRE LNSYIQSQTTRKLPL HGDLPITEMH
Subjt:  LRNVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
SwissProt top hitse value%identityAlignment
Q31708 Ribosomal protein S4, mitochondrial4.8e-1881.97Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSI-KRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NV NRELTIIQRRILR+LRN+KRSI KRKIYP++YL SYIQ QTTRKLP  +GDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSI-KRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
Arabidopsis top hitse value%identityAlignment
AT2G07734.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein2.8e-2186.89Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSI-KRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRN+KRSI KRKIYP++YL SYIQ QTTRKLPL HGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSI-KRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
ATMG00290.1 mitochondrial ribosomal protein S42.8e-2186.89Show/hide
Query:  NVRNRELTIIQRRILRKLRNKKRSI-KRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH
        NVRNRELTIIQRRILR+LRN+KRSI KRKIYP++YL SYIQ QTTRKLPL HGDLPITEMH
Subjt:  NVRNRELTIIQRRILRKLRNKKRSI-KRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGAGATTTGAGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTTCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCC
GAGAGAATATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTAAATCATGGGGATTTACCCATCACAGAGATGCACAGTTCAGTGCCACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGAGATTTGAGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTTCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCC
GAGAGAATATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTAAATCATGGGGATTTACCCATCACAGAGATGCACAGTTCAGTGCCACATTAA
Protein sequenceShow/hide protein sequence
MVRDLRNVRNRELTIIQRRILRKLRNKKRSIKRKIYPREYLNSYIQSQTTRKLPLNHGDLPITEMHSSVPH