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ClCG10G003230 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G003230
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein cornichon homolog 4-like
Genome locationCG_Chr10:4010765..4015816
RNA-Seq ExpressionClCG10G003230
SyntenyClCG10G003230
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028361.1 Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma]9.3e-4486.41Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNVPTKTALDRCYGDIQYAKLGEEATAFQTSLSSFSPLPF
        ++  LMCLADLEFDYINPYDSASRINKVI PEFI+MGVLCLFYLLTGHWGMSI+CGPYIYYNV TKTA DRCY DIQYAKLG+EATAFQTSLSSF PLP 
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNVPTKTALDRCYGDIQYAKLGEEATAFQTSLSSFSPLPF

Query:  YIL
         IL
Subjt:  YIL

TXG51051.1 hypothetical protein EZV62_023575 [Acer yangbiense]1.9e-2857.98Show/hide
Query:  MCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV---------------------PTKTALDRCYGDIQYAKLGEE
        MCLADLEFDYINPYDS+SRINKVI+PEFI  GVLC FYL+TGHW MS++C PY+YYNV                       KT   RC  DIQ  +LG+E
Subjt:  MCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV---------------------PTKTALDRCYGDIQYAKLGEE

Query:  ATAFQTSLSSFSPLPFYIL
         T FQ  LS+FSPLP +IL
Subjt:  ATAFQTSLSSFSPLPFYIL

XP_008448916.1 PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo]3.3e-2594.92Show/hide
Query:  LMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV
        LMCLADLEFDYINPYDSASRINKVIMPEF+AMGVLCLFYLLTGHWGMS++CGPYIYYNV
Subjt:  LMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV

XP_021613096.1 protein cornichon homolog 4-like isoform X2 [Manihot esculenta]2.2e-3270Show/hide
Query:  VRVLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNVPTKTALDRCYGDIQYAKLGEEATAFQTSLSSFSPL
        V ++  LMCLADLEFDYINPYDS+SRINKVI+PE+I  GVL LFYLLTGHW MS++CGPY+YYN+  KTA  RC GDIQ+A LG++A  FQT LS F PL
Subjt:  VRVLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNVPTKTALDRCYGDIQYAKLGEEATAFQTSLSSFSPL

XP_023553496.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]3.3e-2594.92Show/hide
Query:  LMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV
        LMCLADLEFDYINPYDSASRINKV+MPEFIAMGVLCLFYLLTGHWGMS++CGPYIYYNV
Subjt:  LMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV

TrEMBL top hitse value%identityAlignment
A0A1S3BLR3 protein cornichon homolog 4 isoform X11.6e-2594.92Show/hide
Query:  LMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV
        LMCLADLEFDYINPYDSASRINKVIMPEF+AMGVLCLFYLLTGHWGMS++CGPYIYYNV
Subjt:  LMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV

A0A5C7H2F7 Uncharacterized protein9.1e-2957.98Show/hide
Query:  MCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV---------------------PTKTALDRCYGDIQYAKLGEE
        MCLADLEFDYINPYDS+SRINKVI+PEFI  GVLC FYL+TGHW MS++C PY+YYNV                       KT   RC  DIQ  +LG+E
Subjt:  MCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV---------------------PTKTALDRCYGDIQYAKLGEE

Query:  ATAFQTSLSSFSPLPFYIL
         T FQ  LS+FSPLP +IL
Subjt:  ATAFQTSLSSFSPLPFYIL

A0A5D3D7B8 Protein cornichon-like protein 4 isoform X14.7e-2594.83Show/hide
Query:  MCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV
        MCLADLEFDYINPYDSASRINKVIMPEF+AMGVLCLFYLLTGHWGMS++CGPYIYYNV
Subjt:  MCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV

A0A6J1HL36 protein cornichon homolog 4-like4.7e-2593.22Show/hide
Query:  LMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV
        LMCLADLEFDYINPYDSASRINKV+MPEFIA+GVLCLFYLLTGHWGMS++CGPYIYYNV
Subjt:  LMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV

A0A6J1KXU1 protein cornichon homolog 4-like4.7e-2588.89Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV
        ++  LMCLADLEFDYINPYDSASRINKVI PEFI+MGVLCLFYLLTGHWGMSI+CGPYIYYNV
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV

SwissProt top hitse value%identityAlignment
Q3EDD7 Probable protein cornichon homolog 21.6e-2267.65Show/hide
Query:  SDSEVRVLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN
        +D     +  L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YYN
Subjt:  SDSEVRVLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN

Q84W04 Protein cornichon homolog 42.7e-2272.58Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN
        ++  L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YYN
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN

Q8GWT5 Protein cornichon homolog 36.3e-1966.13Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN
        ++  L+ LADLEFDYINPYDSASRIN V++PE I  G LC+FYL+TGHW M+++C PY+YYN
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN

Q9C7D7 Protein cornichon homolog 14.8e-1145.16Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN
        V   ++CL DLE DY+NP+++++RIN++++PEFI  G LCL +LLT HW   ++  P   Y+
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN

Q9SZ74 Protein cornichon homolog 51.0e-1657.14Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV
        V+  L CLADLEFD INPYD +SRIN++++PEF   G+LCL+Y+LTGHW M+++  P+++YN+
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein1.1e-2367.65Show/hide
Query:  SDSEVRVLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN
        +D     +  L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YYN
Subjt:  SDSEVRVLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN

AT1G12390.1 Cornichon family protein1.9e-2372.58Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN
        ++  L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YYN
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN

AT1G62880.1 Cornichon family protein4.5e-2066.13Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN
        ++  L+ LADLEFDYINPYDSASRIN V++PE I  G LC+FYL+TGHW M+++C PY+YYN
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN

AT3G12180.1 Cornichon family protein3.4e-1245.16Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN
        V   ++CL DLE DY+NP+++++RIN++++PEFI  G LCL +LLT HW   ++  P   Y+
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYN

AT4G12090.1 Cornichon family protein7.2e-1857.14Show/hide
Query:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV
        V+  L CLADLEFD INPYD +SRIN++++PEF   G+LCL+Y+LTGHW M+++  P+++YN+
Subjt:  VLMALMCLADLEFDYINPYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGATTTGGTTTCCAAAAGAATCTTCAGAAATTTGACTCGCCAACCATCCGGCAGTGGCGTTCGTCAACGTTGAGTTCTTCCGGTCATCCAAATCCACCTTCCGA
TTCATCCTTCACGAGCAACCTGCGTAAACCTCCGGCTCCGAGGACTATAGCCTTGATTGACTGCGGAAGGGAAGAGGAGGAGCATGGGGGATCTATATGTGTGGCTTATA
TCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGATTCTGAGGTCAGGGTTTTGATGGCGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAAC
CCTTATGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCATCGCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCAATTAT
ATGTGGGCCCTACATATATTATAATGTACCTACGAAGACAGCACTTGATCGATGTTACGGAGATATTCAATATGCTAAACTGGGAGAAGAAGCAACGGCTTTTCAAACTA
GCCTATCTAGTTTTTCTCCTCTTCCTTTCTATATTTTGGTATTTGGAGACAAGAAAAGACTTTTCATTTTTCAAATTTTGGAAAGATCCATTGAGTTTGAAAAGAAAATG
TCCAATGGCAACCGTTATACACAAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGATTTGGTTTCCAAAAGAATCTTCAGAAATTTGACTCGCCAACCATCCGGCAGTGGCGTTCGTCAACGTTGAGTTCTTCCGGTCATCCAAATCCACCTTCCGA
TTCATCCTTCACGAGCAACCTGCGTAAACCTCCGGCTCCGAGGACTATAGCCTTGATTGACTGCGGAAGGGAAGAGGAGGAGCATGGGGGATCTATATGTGTGGCTTATA
TCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGATTCTGAGGTCAGGGTTTTGATGGCGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAAC
CCTTATGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCATCGCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCAATTAT
ATGTGGGCCCTACATATATTATAATGTACCTACGAAGACAGCACTTGATCGATGTTACGGAGATATTCAATATGCTAAACTGGGAGAAGAAGCAACGGCTTTTCAAACTA
GCCTATCTAGTTTTTCTCCTCTTCCTTTCTATATTTTGGTATTTGGAGACAAGAAAAGACTTTTCATTTTTCAAATTTTGGAAAGATCCATTGAGTTTGAAAAGAAAATG
TCCAATGGCAACCGTTATACACAAAGATAA
Protein sequenceShow/hide protein sequence
MCGFGFQKNLQKFDSPTIRQWRSSTLSSSGHPNPPSDSSFTSNLRKPPAPRTIALIDCGREEEEHGGSICVAYIILLPHCSSYCPCLSDSEVRVLMALMCLADLEFDYIN
PYDSASRINKVIMPEFIAMGVLCLFYLLTGHWGMSIICGPYIYYNVPTKTALDRCYGDIQYAKLGEEATAFQTSLSSFSPLPFYILVFGDKKRLFIFQILERSIEFEKKM
SNGNRYTQR