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ClCG10G005105 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G005105
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionIntegrase core domain containing protein
Genome locationCG_Chr10:6285898..6287428
RNA-Seq ExpressionClCG10G005105
SyntenyClCG10G005105
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]1.9e-2255.32Show/hide
Query:  STTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMKKYS
        S++ +  ++  N  YE+W+  DQLLLGWLYNSM+PE+ATQ +GY+ + DLW A+Q+LFGVQS+AE DYL+++FQQTRK  LKM ++L  MK ++
Subjt:  STTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMKKYS

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]4.7e-2156.99Show/hide
Query:  TTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMKKYS
        +T  +   T N  YE WI VD+LLLGWLYNSM+ ++A Q +G+ TS++LW AVQ+LFGVQS+AE DYLK++FQQT K  L+M EYL  MK ++
Subjt:  TTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMKKYS

XP_038904321.1 uncharacterized protein LOC120090675 [Benincasa hispida]3.8e-2357.58Show/hide
Query:  SKGLGEGTSTTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK
        S G G  +S+T L+     N +Y  W+AVDQLLLGWLYNSM+P+IA Q +G++ ++DLW  +QQLFG+QS+AE DYL+ +FQ TRK  LKME+YL TMK
Subjt:  SKGLGEGTSTTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]1.3e-2359.6Show/hide
Query:  SKGLGEGTSTTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK
        S G G  +S T L+     N +YE+W+AVDQLLLGWLYNSM+PE+A Q +G + +KDLW ++ QLFGVQS+ E DYL+ +FQ TRK  LKMEEYL TMK
Subjt:  SKGLGEGTSTTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]1.3e-2359.6Show/hide
Query:  SKGLGEGTSTTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK
        S G G  +S T L+     N +YE+W+AVDQLLLGWLYNSM+PE+A Q +G + +KDLW ++ QLFGVQS+ E DYL+ +FQ TRK  LKMEEYL TMK
Subjt:  SKGLGEGTSTTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein1.4e-1852.04Show/hide
Query:  EGTSTTVLKEKS-TP---NTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK
        EG   T+    S TP   N+ +E W+  D LLLGWLYNSM+P++A Q +G+   +DLWDA Q  FGVQS+AE D+L+++ Q TRK   KMEEYL  MK
Subjt:  EGTSTTVLKEKS-TP---NTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK

A0A5A7VPY0 Uncharacterized protein9.5e-2058.54Show/hide
Query:  TPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK
        T N +YE WI  D LLLGWLYNSM+PE+  Q +G+  +KDLW+A Q LFG+QS+A+ D+L + FQ T+K  L MEEYL TMK
Subjt:  TPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK

A0A5D3BCH9 Uncharacterized protein1.4e-1852.04Show/hide
Query:  EGTSTTVLKEKS-TP---NTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK
        EG   T+    S TP   N+ +E W+  D LLLGWLYNSM+P++A Q +G+   +DLWDA Q  FGVQS+AE D+L+++ Q TRK   KMEEYL  MK
Subjt:  EGTSTTVLKEKS-TP---NTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMK

A0A6J1D5J0 uncharacterized protein LOC1110175019.2e-2355.32Show/hide
Query:  STTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMKKYS
        S++ +  ++  N  YE+W+  DQLLLGWLYNSM+PE+ATQ +GY+ + DLW A+Q+LFGVQS+AE DYL+++FQQTRK  LKM ++L  MK ++
Subjt:  STTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMKKYS

A0A6J1DCW4 uncharacterized protein LOC1110195982.3e-2156.99Show/hide
Query:  TTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMKKYS
        +T  +   T N  YE WI VD+LLLGWLYNSM+ ++A Q +G+ TS++LW AVQ+LFGVQS+AE DYLK++FQQT K  L+M EYL  MK ++
Subjt:  TTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKMEEYLTTMKKYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGTTGGGATCTCCTCTTGCTACTTGTTCCTCACTCTCGTTACTCTTGCTTCTAAGGGTTTAGGTGAAGGCACCAGTACCACAGTCTTGAAAGAGAAGTCGACGCC
AAATACAGAGTATGAAACATGGATAGCTGTTGATCAGCTACTCCTGGGCTGGCTTTACAACTCGATGTCTCCGGAAATCGCAACCCAAGCGATCGGGTATCAGACCTCGA
AAGATCTTTGGGATGCTGTGCAACAGCTCTTTGGTGTCCAGTCCAAGGCTGAAACCGATTACCTGAAACGCCTCTTTCAACAAACAAGGAAAGACTTCCTCAAAATGGAG
GAATATCTAACCACCATGAAAAAATACTCTACAAGTGCTAGCTGGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGGTTGGGATCTCCTCTTGCTACTTGTTCCTCACTCTCGTTACTCTTGCTTCTAAGGGTTTAGGTGAAGGCACCAGTACCACAGTCTTGAAAGAGAAGTCGACGCC
AAATACAGAGTATGAAACATGGATAGCTGTTGATCAGCTACTCCTGGGCTGGCTTTACAACTCGATGTCTCCGGAAATCGCAACCCAAGCGATCGGGTATCAGACCTCGA
AAGATCTTTGGGATGCTGTGCAACAGCTCTTTGGTGTCCAGTCCAAGGCTGAAACCGATTACCTGAAACGCCTCTTTCAACAAACAAGGAAAGACTTCCTCAAAATGGAG
GAATATCTAACCACCATGAAAAAATACTCTACAAGTGCTAGCTGGTCTTGA
Protein sequenceShow/hide protein sequence
MRVGISSCYLFLTLVTLASKGLGEGTSTTVLKEKSTPNTEYETWIAVDQLLLGWLYNSMSPEIATQAIGYQTSKDLWDAVQQLFGVQSKAETDYLKRLFQQTRKDFLKME
EYLTTMKKYSTSASWS