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ClCG10G007980 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G007980
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionChromo domain-containing protein
Genome locationCG_Chr10:12983803..12986252
RNA-Seq ExpressionClCG10G007980
SyntenyClCG10G007980
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEV84874.1 hypothetical protein [Tanacetum cinerariifolium]6.5e-1258.06Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE
        V T YD+ VE IL+ R +  +GVPS+ EYL+KW  LPDSEASWE E  LWQFADK+  Y ++
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE

GEY47260.1 hypothetical protein CTI12_AA187700 [Tanacetum cinerariifolium]3.8e-1258.06Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE
        V T YD+ VE IL+ R +  +GVPS+ EYL+KW  LPDSEASWE E  LWQFADK+  Y ++
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE

GEY98968.1 hypothetical protein [Tanacetum cinerariifolium]2.4e-1454.55Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASISGGGAH
        V T YD+ VE IL+ R +  +GVPS+ EYL+KW  LPDSEASW+ +  LWQFAD++  Y     DE VAS+ GGG H
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASISGGGAH

WP_159201812.1 chromo domain-containing protein, partial [Klebsiella pneumoniae]1.7e-1248.72Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASISGGGAHP
        V T +D+ +  ILA R V  +GVP+H E+L+KW   PD+EASWEKE  LWQF D +  + +   DEGV    GGG  P
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASISGGGAHP

WP_159314075.1 chromo domain-containing protein [Klebsiella pneumoniae]4.5e-1350Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASISGGGAHP
        V T +D+ +  ILA R V  +GVP+H E+L+KW  LPD+EASWEKE  LWQF D +  + +   DEGV    GGG  P
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASISGGGAHP

TrEMBL top hitse value%identityAlignment
A0A2U1P6R5 Uncharacterized protein4.1e-1258.06Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE
        V T YD+ VE IL+ R +  +GVPS+ EYL+KW  LPDSEASWE +  LWQFADK+  Y +E
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE

A0A5C7GPX2 Uncharacterized protein3.5e-1152.78Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASIS
        V T +DK+VE ILA R +  +GVP++ EYLVKW  LPDSEASWE+   LWQFA+ +  Y    +DEG    S
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASIS

A0A699JCR9 Chromo domain-containing protein (Fragment)9.1e-1258.06Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE
        V T YD+ VE IL  R +  +GVPS+ EYL+KW  LPDSEASWE E  LWQFAD++  Y Q+
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE

A0A699RND4 Uncharacterized protein (Fragment)4.1e-1258.06Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE
        V T YD+ VE IL+ R +  +GVPS+ EYL+KW  LPDSEASWE E  LWQFAD++  Y Q+
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE

A0A6L2M4J9 Chromo domain-containing protein9.1e-1256.45Show/hide
Query:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE
        V T YD+ VE IL+ R +  +GVPS+ EYL+KW  LPDSEASWE E  LWQFAD++  Y ++
Subjt:  VTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGACAACTGAGTATGACAAGAATGTTGAAACCATTTTGGCCCACAGAAGGGTAAGTAGCAAGGGTGTCCCAAGTCACTTCGAATATCTTGTGAAATGG
ACAAGACTCCCAGACTCGGAGGCAAGCTGGGAAAAGGAAGGACACCTATGGCAATTCGCCGACAAGGTCTCAAACTATTGGCAGGAGGTCCGCGACGAGGGCGTC
GCTAGCATCAGTGGGGGAGGTGCCCATCCCCTTAGCATGGCCAAGCAAGGATGGGGAAACCGCTTGCCGCAGCCCCTCGGGAGGCCCATGCGTCTGCCGCACCCC
ACCGGCACGCATGGCCTAAGGCGCACAATAATGGGCTGCGCGCATAAGGGAGGAAAGGCGAGAGGTAGACGCGTCGACCCCAGGCGTTGGCATGGGCGACGCATC
GCCAGGCAAGGCTGCCAGGCGCAAAGGAGCTTGACGCTAGGCTGCGCGACACCAGGATGCTCGACGCAGGGCTGCTCGACGCACAGTGCCGCAAGCCATACCCGG
GAGACGCATAGACCCGGACACAAGGATCCCGATCACCCGGGAAAAGTCAGGGCGCGCCTAGAGAGACCCGGACACGGCTGGAAGCCTCCAGAGTCGGCTGACACG
CGCGGCCATGGCCTAGACAGACCCCGATGGCGCTGGAATGGCCTAGATGGTTCTCGAATGTTCCTCCCAATACCTTTGCCGGTTTTTTTACCCGAGATCGAAGTT
ACACTTCCATTTATCATGAAGTTAAGCTCCTCAGCGTATAACCTTAACAACCAATGGACTAAAGGTATAGTTGGAAATTGGTTGAAGTTAGATGTATTTTGGAAA
TCAGGATTTGAAAAGGGACACAGTACTGAGGGACATGAGAAGGTACTTGGGCACCCGCCATATTCCTATGTGCACATAGAGGTAGCGAGCAAGTTCGGGATGCTT
TGCCTACGCAAGAACCTCGTCTGGGCCTTCTTTGGTGAAAATGGTTGGACAGTGAACCTTACAGAGGAGTCAAGGTTGATGTCTTCACATCTCCTCTCGGGTTAT
GGAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTGACAACTGAGTATGACAAGAATGTTGAAACCATTTTGGCCCACAGAAGGGTAAGTAGCAAGGGTGTCCCAAGTCACTTCGAATATCTTGTGAAATGG
ACAAGACTCCCAGACTCGGAGGCAAGCTGGGAAAAGGAAGGACACCTATGGCAATTCGCCGACAAGGTCTCAAACTATTGGCAGGAGGTCCGCGACGAGGGCGTC
GCTAGCATCAGTGGGGGAGGTGCCCATCCCCTTAGCATGGCCAAGCAAGGATGGGGAAACCGCTTGCCGCAGCCCCTCGGGAGGCCCATGCGTCTGCCGCACCCC
ACCGGCACGCATGGCCTAAGGCGCACAATAATGGGCTGCGCGCATAAGGGAGGAAAGGCGAGAGGTAGACGCGTCGACCCCAGGCGTTGGCATGGGCGACGCATC
GCCAGGCAAGGCTGCCAGGCGCAAAGGAGCTTGACGCTAGGCTGCGCGACACCAGGATGCTCGACGCAGGGCTGCTCGACGCACAGTGCCGCAAGCCATACCCGG
GAGACGCATAGACCCGGACACAAGGATCCCGATCACCCGGGAAAAGTCAGGGCGCGCCTAGAGAGACCCGGACACGGCTGGAAGCCTCCAGAGTCGGCTGACACG
CGCGGCCATGGCCTAGACAGACCCCGATGGCGCTGGAATGGCCTAGATGGTTCTCGAATGTTCCTCCCAATACCTTTGCCGGTTTTTTTACCCGAGATCGAAGTT
ACACTTCCATTTATCATGAAGTTAAGCTCCTCAGCGTATAACCTTAACAACCAATGGACTAAAGGTATAGTTGGAAATTGGTTGAAGTTAGATGTATTTTGGAAA
TCAGGATTTGAAAAGGGACACAGTACTGAGGGACATGAGAAGGTACTTGGGCACCCGCCATATTCCTATGTGCACATAGAGGTAGCGAGCAAGTTCGGGATGCTT
TGCCTACGCAAGAACCTCGTCTGGGCCTTCTTTGGTGAAAATGGTTGGACAGTGAACCTTACAGAGGAGTCAAGGTTGATGTCTTCACATCTCCTCTCGGGTTAT
GGAGGATAA
Protein sequenceShow/hide protein sequence
MGVTTEYDKNVETILAHRRVSSKGVPSHFEYLVKWTRLPDSEASWEKEGHLWQFADKVSNYWQEVRDEGVASISGGGAHPLSMAKQGWGNRLPQPLGRPMRLPHP
TGTHGLRRTIMGCAHKGGKARGRRVDPRRWHGRRIARQGCQAQRSLTLGCATPGCSTQGCSTHSAASHTRETHRPGHKDPDHPGKVRARLERPGHGWKPPESADT
RGHGLDRPRWRWNGLDGSRMFLPIPLPVFLPEIEVTLPFIMKLSSSAYNLNNQWTKGIVGNWLKLDVFWKSGFEKGHSTEGHEKVLGHPPYSYVHIEVASKFGML
CLRKNLVWAFFGENGWTVNLTEESRLMSSHLLSGYGG