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ClCG10G008580 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G008580
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionSerine/threonine-protein kinase atg1-like
Genome locationCG_Chr10:18603992..18604300
RNA-Seq ExpressionClCG10G008580
SyntenyClCG10G008580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030495102.1 uncharacterized protein LOC115710889 [Cannabis sativa]6.5e-0558.7Show/hide
Query:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKM
        + Q+A++LKNRPQ TLPS TE  R +GKE C+A+TLRSGK L + +
Subjt:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKM
XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]2.9e-0556.86Show/hide
Query:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKMPDYRS
        + Q+A++LKNRPQ TLPS TE  R +GKE C+AVTLRSGK + + +   RS
Subjt:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKMPDYRS
XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]8.5e-0558.7Show/hide
Query:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKM
        + Q+A++LKNRPQ TLPS TE  R +GKE C+AVTLRSGK + + +
Subjt:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKM
XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]6.5e-0558.7Show/hide
Query:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKM
        + Q+A++LKNRPQ TLPS TE  R +GKE C+A+TLRSGK L + +
Subjt:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKM
XP_038896360.1 uncharacterized protein LOC120084623 [Benincasa hispida]3.8e-0571.43Show/hide
Query:  MDQIASELKNRPQRTLPSTTEAMR---NNGKEQCQAVTLRSGKFLTTKM
        M QIA ELKNRPQ TLPS+TE  R   N GKE CQAVTLRSGK  TTK+
Subjt:  MDQIASELKNRPQRTLPSTTEAMR---NNGKEQCQAVTLRSGKFLTTKM
TrEMBL top hitse value%identityAlignment
A0A5B6UVX9 Serine/threonine-protein kinase atg1-like7.7e-0438.67Show/hide
Query:  QIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKMPDYRSPINPKLLTFQQPSLQPNVSSTTASTS
        Q+A+EL+ +PQ  LPS T+ +R+ GKE C+ +TLRSGK L  K+ ++   +   ++T  +  +QP+V   T   S
Subjt:  QIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKMPDYRSPINPKLLTFQQPSLQPNVSSTTASTS
A0A5B6WFU8 Uncharacterized protein5.9e-0443.06Show/hide
Query:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKMPDYRSPINPKLLTFQQPSLQPNVSST
        + Q  +ELKNRPQ  LPS TE  R  GK QC+ +TLRSGK L    P   + + P+   F++ +   N  ST
Subjt:  MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKMPDYRSPINPKLLTFQQPSLQPNVSST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAATAGCGAGTGAACTTAAGAATAGACCGCAAAGAACATTGCCAAGCACCACTGAGGCCATGAGAAATAATGGTAAGGAACAATGTCAAGCGGTGACGTTACG
TAGTGGGAAGTTTCTAACTACTAAAATGCCTGATTACAGGAGCCCGATAAACCCAAAACTTTTAACCTTTCAACAACCTTCTCTTCAACCAAACGTTAGTTCAACAACAG
CTTCAACATCTGTTCTATTAGACAACCACAATTCTGACTCTTTGAATCTAAGAAACCCAACTTGTACAAACAAAGCACCTAGTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCAAATAGCGAGTGAACTTAAGAATAGACCGCAAAGAACATTGCCAAGCACCACTGAGGCCATGAGAAATAATGGTAAGGAACAATGTCAAGCGGTGACGTTACG
TAGTGGGAAGTTTCTAACTACTAAAATGCCTGATTACAGGAGCCCGATAAACCCAAAACTTTTAACCTTTCAACAACCTTCTCTTCAACCAAACGTTAGTTCAACAACAG
CTTCAACATCTGTTCTATTAGACAACCACAATTCTGACTCTTTGAATCTAAGAAACCCAACTTGTACAAACAAAGCACCTAGTGACTGA
Protein sequenceShow/hide protein sequence
MDQIASELKNRPQRTLPSTTEAMRNNGKEQCQAVTLRSGKFLTTKMPDYRSPINPKLLTFQQPSLQPNVSSTTASTSVLLDNHNSDSLNLRNPTCTNKAPSD