; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG10G010380 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G010380
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCG_Chr10:23096824..23097534
RNA-Seq ExpressionClCG10G010380
SyntenyClCG10G010380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.7e-4646.89Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P++LE+  +SWG  P+PF   N++L    F  N+  WW +  QEG PG++F  +LKQLS I+ N Q K K  +D++K +W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  NLS     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

KAA0039966.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.3e-4546.89Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P+ LE+  +SWG  P+PF F N++L    F KN+  WW +  Q G PG++F  +LKQLS I+ + Q K K   D+EK++W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  N S     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

KAA0040038.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.3e-4546.89Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P+ LE+  +SWG  P+PF   N++L      KN+  WW +  QEG PG++F  +LKQLS I+ N Q K K  +D++K +W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  NLS     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

TYK06777.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.5e-4647.37Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P++LE+  +SWG  P+PF   N++L    F  NI  WW +  QEG PG++F  +LKQLS I+ N Q K K  +D++K +W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  NLS     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo]7.7e-4646.89Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P++LE+  +SWG  P+PF   N++L    F  N+  WW +  QEG PG++F  +LKQLS I+ N Q K K  +D++K +W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  NLS     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

TrEMBL top hitse value%identityAlignment
A0A1S4E2K5 LINE-1 retrotransposable element ORF2 protein3.8e-4646.89Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P++LE+  +SWG  P+PF   N++L    F  N+  WW +  QEG PG++F  +LKQLS I+ N Q K K  +D++K +W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  NLS     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

A0A5A7TCY9 LINE-1 retrotransposable element ORF2 protein1.1e-4546.89Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P+ LE+  +SWG  P+PF F N++L    F KN+  WW +  Q G PG++F  +LKQLS I+ + Q K K   D+EK++W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  N S     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

A0A5D3C4J1 LINE-1 retrotransposable element ORF2 protein1.7e-4647.37Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P++LE+  +SWG  P+PF   N++L    F  NI  WW +  QEG PG++F  +LKQLS I+ N Q K K  +D++K +W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  NLS     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

A0A5D3DLM2 LINE-1 retrotransposable element ORF2 protein1.1e-4546.89Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P+ LE+  +SWG  P+PF F N++L    F KN+  WW +  Q G PG++F  +LKQLS I+ + Q K K   D+EK++W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  N S     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein3.8e-4646.89Show/hide
Query:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW
        E  FTAH+S+TL R+TS + P++LE+  +SWG  P+PF   N++L    F  N+  WW +  QEG PG++F  +LKQLS I+ N Q K K  +D++K +W
Subjt:  EERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNL----FNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQVKQKKVTDKEKQSW

Query:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK
        I EI+ ID+LE+  NLS     R T LK D+     +EA  W Q+ KR W+ EG EN++FFHK+CSARQRRS I+ +   +G  C TN SI   F+ HF+
Subjt:  ILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIKHFK

Query:  DIYVGSKKE
        DIY G  +E
Subjt:  DIYVGSKKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATTTTACCCGGTCAAATCTCAGAGTTAACGCTATCTCCTCAAGGCTGGACTGTTTTCTCTACACACCCCCAAGGAGAAGAAAGATTCACTGCCCATTTTTCAAG
AACTTTGCCGAGAATCACTTCTGCTAACCACCCTCTCATTCTTGAAAATCATCAACTTAGCTGGGGCCCCAACCCCAATCCCTTCCACTTCAACAATCTCAATCTCTTCA
ACAAAAACATTAAAGAGTGGTGGGACTCTACCAGTCAAGAGGGATTCCCAGGATATGCTTTTAACATGAGGCTCAAACAACTCTCGTATATTGTCAATAATTGGCAGGTC
AAACAGAAAAAGGTAACTGATAAAGAGAAGCAGTCGTGGATTCTTGAAATTGAAAGGATTGATAAACTCGAAAGTAGTCAAAATCTCAGCAACATAGACATTGCCCGTAC
AACTTCCTTGAAGATTGATCTCAGTGCTGAAGCTATGAGAGAAGCCACTTACTGGGCCCAAAGGTATAAAAGAAACTGGCTCCTCGAGGGGCATGAAAATTCGGCTTTTT
TTCATAAAGTTTGCTCGGCTAGACAAAGAAGAAGTTTCATCACCAAAATGCTAGACGACAATGGAAACAGTTGCATCACCAACAACTCCATTGAAGATGTTTTTATTAAA
CACTTCAAGGATATTTATGTGGGCTCCAAGAAAGAACAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAATTTTACCCGGTCAAATCTCAGAGTTAACGCTATCTCCTCAAGGCTGGACTGTTTTCTCTACACACCCCCAAGGAGAAGAAAGATTCACTGCCCATTTTTCAAG
AACTTTGCCGAGAATCACTTCTGCTAACCACCCTCTCATTCTTGAAAATCATCAACTTAGCTGGGGCCCCAACCCCAATCCCTTCCACTTCAACAATCTCAATCTCTTCA
ACAAAAACATTAAAGAGTGGTGGGACTCTACCAGTCAAGAGGGATTCCCAGGATATGCTTTTAACATGAGGCTCAAACAACTCTCGTATATTGTCAATAATTGGCAGGTC
AAACAGAAAAAGGTAACTGATAAAGAGAAGCAGTCGTGGATTCTTGAAATTGAAAGGATTGATAAACTCGAAAGTAGTCAAAATCTCAGCAACATAGACATTGCCCGTAC
AACTTCCTTGAAGATTGATCTCAGTGCTGAAGCTATGAGAGAAGCCACTTACTGGGCCCAAAGGTATAAAAGAAACTGGCTCCTCGAGGGGCATGAAAATTCGGCTTTTT
TTCATAAAGTTTGCTCGGCTAGACAAAGAAGAAGTTTCATCACCAAAATGCTAGACGACAATGGAAACAGTTGCATCACCAACAACTCCATTGAAGATGTTTTTATTAAA
CACTTCAAGGATATTTATGTGGGCTCCAAGAAAGAACAG
Protein sequenceShow/hide protein sequence
MVILPGQISELTLSPQGWTVFSTHPQGEERFTAHFSRTLPRITSANHPLILENHQLSWGPNPNPFHFNNLNLFNKNIKEWWDSTSQEGFPGYAFNMRLKQLSYIVNNWQV
KQKKVTDKEKQSWILEIERIDKLESSQNLSNIDIARTTSLKIDLSAEAMREATYWAQRYKRNWLLEGHENSAFFHKVCSARQRRSFITKMLDDNGNSCITNNSIEDVFIK
HFKDIYVGSKKEQ