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ClCG10G010410 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G010410
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS ribonuclease
Genome locationCG_Chr10:23133436..23135479
RNA-Seq ExpressionClCG10G010410
SyntenyClCG10G010410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2606299.1 S ribonuclease [Pyrus ussuriensis x Pyrus communis]4.7e-0937.4Show/hide
Query:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS------LVND---HWDYLSFPADFYVLDVN
        V++ L   LPTK  D G+F +PCLI   +FEHAM  +                   L    + +QLAD S      ++ D     ++L FPADFYVLD+ 
Subjt:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS------LVND---HWDYLSFPADFYVLDVN

Query:  ASSPPYNLSVLLGRPFLKGGKTQ
         SS   +L +LLGRPF+K  +T+
Subjt:  ASSPPYNLSVLLGRPFLKGGKTQ

XP_009335343.1 PREDICTED: uncharacterized protein LOC103928056, partial [Pyrus x bretschneideri]4.7e-0936.59Show/hide
Query:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS------LVND---HWDYLSFPADFYVLDVN
        V++ L   LPTK  D G+F +PC+I   +FEHAM  +                   L    + +QLAD S      ++ D     ++L FPADFYVLD+ 
Subjt:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS------LVND---HWDYLSFPADFYVLDVN

Query:  ASSPPYNLSVLLGRPFLKGGKTQ
         S+   +LS+LLGRPF+K  +T+
Subjt:  ASSPPYNLSVLLGRPFLKGGKTQ

XP_022156327.1 uncharacterized protein LOC111023248 [Momordica charantia]7.7e-1229.54Show/hide
Query:  SQNSQLADVVSRLDIQYE-KLPSLPVSNVRNVSVIPTISFMESSPTPVTEPVVELIDVMDSEEKMVCSPK-RCVVNFDPPLKLNSYI-------------
        +Q +QLA  +SRL+ Q    LPS    N +   V    + M  +   +    + L     SEEK   SP   C +NFDPPL L+SY              
Subjt:  SQNSQLADVVSRLDIQYE-KLPSLPVSNVRNVSVIPTISFMESSPTPVTEPVVELIDVMDSEEKMVCSPK-RCVVNFDPPLKLNSYI-------------

Query:  -------------LVASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHSLVND---------HWD
                      +++ +  NLP K +D G F +PC+I+  K EH M  +                      + + VQL DHS VN            +
Subjt:  -------------LVASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHSLVND---------HWD

Query:  YLSFPADFYVLDVNASSPPYNLSVLLGRPFLKGGKTQ
         L+FP DFY+L+++ +    + S+LLGRPF+K  KT+
Subjt:  YLSFPADFYVLDVNASSPPYNLSVLLGRPFLKGGKTQ

XP_028954739.1 uncharacterized protein LOC114823395 [Malus domestica]2.1e-0934.69Show/hide
Query:  KMVCSPKRCVVNFDPPLKLNSYILVASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS------
        K +C+ KR + N +  +K++    V++ L   LPTK  D G F++PC+I T +FEHAM  +                   L    + +QLAD S      
Subjt:  KMVCSPKRCVVNFDPPLKLNSYILVASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS------

Query:  LVND---HWDYLSFPADFYVLDVNASSPPYNLSVLLGRPFLKGGKTQ
        ++ D     ++L FPADFYVLD+  S+   +L +LLGRPF+K  +T+
Subjt:  LVND---HWDYLSFPADFYVLDVNASSPPYNLSVLLGRPFLKGGKTQ

XP_038890303.1 uncharacterized protein LOC120079919 [Benincasa hispida]4.8e-1449.17Show/hide
Query:  QLADHSLVND---------HWDYLSFPADFYVLDVNASSPPYNLSVLLGRPFL-----------------KGGKTQRIFMIDSPSTTNPICSSTLILQII
        QLADHSLV             + LSF A FYV+DVNA SPP NLSVLLGRPFL                 KGGK ++ F+ D   TT PICSST+  Q  
Subjt:  QLADHSLVND---------HWDYLSFPADFYVLDVNASSPPYNLSVLLGRPFL-----------------KGGKTQRIFMIDSPSTTNPICSSTLILQII

Query:  GQPSKLGVGDDDS---DGRG
         +P  LGVGD DS   DG G
Subjt:  GQPSKLGVGDDDS---DGRG

TrEMBL top hitse value%identityAlignment
A0A2Z6NS99 Integrase catalytic domain-containing protein9.5e-0829.02Show/hide
Query:  MTSQNSQLADVVSRLDIQYEKLPSLPVSNVRNVSVIPTIS--------FMESSPTPVTEPVVELIDV-MDSEEKMVCSPKRCVVNFDPPLKLNSYILVAS
        +T+Q  Q+A+ + +L +Q      LP   V N +V P +S         ++ +     E   E++D  +  +E    S  R V  F  P   +S     S
Subjt:  MTSQNSQLADVVSRLDIQYEKLPSLPVSNVRNVSVIPTIS--------FMESSPTPVTEPVVELIDV-MDSEEKMVCSPKRCVVNFDPPLKLNSYILVAS

Query:  FLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS-------------LVNDHWDYLSFPADFYVLDV
         L   LP K  D G F +PC I  RKFE+ M  +                   L P+ + VQLA+ S              VND    L FPADFY+LD+
Subjt:  FLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS-------------LVNDHWDYLSFPADFYVLDV

Query:  NASSPPYNLSVLLGRPFLKGGKTQ
           +      ++LGRPF++  KT+
Subjt:  NASSPPYNLSVLLGRPFLKGGKTQ

A0A2Z6P6K0 Uncharacterized protein (Fragment)5.5e-0836.8Show/hide
Query:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHSL---------VNDHWDYLSFPADFYVLDV-
        V++ +  NLPTK  D GTF +PC I  ++F+HAM  +                   L P+ I +QLA+ S          V    + L FPADFYVL++ 
Subjt:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHSL---------VNDHWDYLSFPADFYVLDV-

Query:  -NASSPPYNLSVLLGRPFLKGGKTQ
         ++S+PP    ++LGRPFLK  KT+
Subjt:  -NASSPPYNLSVLLGRPFLKGGKTQ

A0A498K7I7 Uncharacterized protein1.2e-0734.96Show/hide
Query:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-----LHPSDIW--------------VQLADHS------LVND---HWDYLSFPADFYVLDVN
        V++ L   LP K +D G+F +PC+I   +FEHAM  I     + P  ++              +QLA+ S      ++ D     D+L FPADFYVLD+ 
Subjt:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-----LHPSDIW--------------VQLADHS------LVND---HWDYLSFPADFYVLDVN

Query:  ASSPPYNLSVLLGRPFLKGGKTQ
         ++     S+LLGRPF+K  +T+
Subjt:  ASSPPYNLSVLLGRPFLKGGKTQ

A0A5N5FT77 S ribonuclease2.3e-0937.4Show/hide
Query:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS------LVND---HWDYLSFPADFYVLDVN
        V++ L   LPTK  D G+F +PCLI   +FEHAM  +                   L    + +QLAD S      ++ D     ++L FPADFYVLD+ 
Subjt:  VASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHS------LVND---HWDYLSFPADFYVLDVN

Query:  ASSPPYNLSVLLGRPFLKGGKTQ
         SS   +L +LLGRPF+K  +T+
Subjt:  ASSPPYNLSVLLGRPFLKGGKTQ

A0A6J1DRS5 uncharacterized protein LOC1110232483.7e-1229.54Show/hide
Query:  SQNSQLADVVSRLDIQYE-KLPSLPVSNVRNVSVIPTISFMESSPTPVTEPVVELIDVMDSEEKMVCSPK-RCVVNFDPPLKLNSYI-------------
        +Q +QLA  +SRL+ Q    LPS    N +   V    + M  +   +    + L     SEEK   SP   C +NFDPPL L+SY              
Subjt:  SQNSQLADVVSRLDIQYE-KLPSLPVSNVRNVSVIPTISFMESSPTPVTEPVVELIDVMDSEEKMVCSPK-RCVVNFDPPLKLNSYI-------------

Query:  -------------LVASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHSLVND---------HWD
                      +++ +  NLP K +D G F +PC+I+  K EH M  +                      + + VQL DHS VN            +
Subjt:  -------------LVASFLVGNLPTKHDDLGTFLVPCLISTRKFEHAMSHI-------------------LHPSDIWVQLADHSLVND---------HWD

Query:  YLSFPADFYVLDVNASSPPYNLSVLLGRPFLKGGKTQ
         L+FP DFY+L+++ +    + S+LLGRPF+K  KT+
Subjt:  YLSFPADFYVLDVNASSPPYNLSVLLGRPFLKGGKTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCTCAAAACTCCCAGCTGGCTGACGTGGTCAGTAGGCTAGACATTCAGTATGAGAAACTCCCTTCCCTACCAGTGTCTAATGTGCGAAACGTAAGTGTC
ATACCTACTATAAGTTTCATGGAGAGCTCCCCAACGCCTGTAACTGAGCCAGTGGTTGAGCTTATAGATGTTATGGATTCTGAGGAAAAGATGGTCTGCTCACCA
AAGAGATGTGTGGTAAATTTTGATCCACCTTTAAAATTAAACTCTTACATTCTTGTTGCTTCTTTCCTAGTAGGTAATCTTCCTACTAAGCATGACGACCTAGGT
ACGTTTCTTGTGCCTTGTTTGATAAGCACAAGGAAATTTGAGCATGCTATGTCTCACATTTTGCATCCTTCTGATATTTGGGTGCAATTAGCTGATCATTCTCTT
GTCAATGATCATTGGGATTATCTATCTTTTCCTGCTGATTTTTATGTCTTGGATGTGAATGCTTCTTCCCCTCCGTATAATTTATCTGTTTTACTAGGGAGGCCC
TTTTTAAAGGGAGGTAAAACTCAAAGGATTTTTATGATTGATTCTCCCTCTACCACTAACCCTATTTGTTCTAGTACCTTAATCTTGCAGATTATTGGTCAACCT
TCTAAGTTGGGAGTGGGAGATGATGACTCGGATGGAAGAGGAAAAGATTTCAAGATAGTCTTGGTGCCCTTCGAAGTTCGACGTGAGGAGCCAAGGAGTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTCTCAAAACTCCCAGCTGGCTGACGTGGTCAGTAGGCTAGACATTCAGTATGAGAAACTCCCTTCCCTACCAGTGTCTAATGTGCGAAACGTAAGTGTC
ATACCTACTATAAGTTTCATGGAGAGCTCCCCAACGCCTGTAACTGAGCCAGTGGTTGAGCTTATAGATGTTATGGATTCTGAGGAAAAGATGGTCTGCTCACCA
AAGAGATGTGTGGTAAATTTTGATCCACCTTTAAAATTAAACTCTTACATTCTTGTTGCTTCTTTCCTAGTAGGTAATCTTCCTACTAAGCATGACGACCTAGGT
ACGTTTCTTGTGCCTTGTTTGATAAGCACAAGGAAATTTGAGCATGCTATGTCTCACATTTTGCATCCTTCTGATATTTGGGTGCAATTAGCTGATCATTCTCTT
GTCAATGATCATTGGGATTATCTATCTTTTCCTGCTGATTTTTATGTCTTGGATGTGAATGCTTCTTCCCCTCCGTATAATTTATCTGTTTTACTAGGGAGGCCC
TTTTTAAAGGGAGGTAAAACTCAAAGGATTTTTATGATTGATTCTCCCTCTACCACTAACCCTATTTGTTCTAGTACCTTAATCTTGCAGATTATTGGTCAACCT
TCTAAGTTGGGAGTGGGAGATGATGACTCGGATGGAAGAGGAAAAGATTTCAAGATAGTCTTGGTGCCCTTCGAAGTTCGACGTGAGGAGCCAAGGAGTTCGTGA
Protein sequenceShow/hide protein sequence
MTSQNSQLADVVSRLDIQYEKLPSLPVSNVRNVSVIPTISFMESSPTPVTEPVVELIDVMDSEEKMVCSPKRCVVNFDPPLKLNSYILVASFLVGNLPTKHDDLG
TFLVPCLISTRKFEHAMSHILHPSDIWVQLADHSLVNDHWDYLSFPADFYVLDVNASSPPYNLSVLLGRPFLKGGKTQRIFMIDSPSTTNPICSSTLILQIIGQP
SKLGVGDDDSDGRGKDFKIVLVPFEVRREEPRSS