; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG10G012000 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G012000
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description60S ribosomal protein L44
Genome locationCG_Chr10:25917606..25918328
RNA-Seq ExpressionClCG10G012000
SyntenyClCG10G012000
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]3.3e-8473.64Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MA+SS K PPSKS   FL  CFRSS KL  KKPS IAPRNRRTFSL+FRFKKSSATVPVD A PSH+ELSFSPDFKKPPPL LITP+ P V GEIVVDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI
         + +KPSQTRKK ESTQSNFT +KLSP +K  A LHSVS PSQLL RQ D K+SVS +LPAAVAT +PAFSD +KP P L TN P KN DRVI++VMVAI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI

Query:  VVLWGRLCAILCTAALFYLRRRLRSEI-VPESSGRGGLG
        +VLWGRLCAILCT ALFYL RR+RSE+ V    GRGG G
Subjt:  VVLWGRLCAILCTAALFYLRRRLRSEI-VPESSGRGGLG

KAG6581554.1 hypothetical protein SDJN03_21556, partial [Cucurbita argyrosperma subsp. sororia]3.8e-5659.27Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MAESSD     K R HFL RCFRSSP +  +K  PIA  NRRT SL FRFKKSSATVP+DAAVP H+ELS SP+F   PP PLI        GEI+VDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKL----SPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHKPAPNLPTNSPAKNFDRVIVI
        CK IKPS+TRKKSESTQSN  +E      +  KKT+  LHS          +  LKKS+S+LP A A +  +   SDR KP    PTNSP K FD VIVI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKL----SPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHKPAPNLPTNSPAKNFDRVIVI

Query:  VMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS
        V VAIVVLWGRLCAILCTAALFYLRR LRS  E+     G G  GR+S
Subjt:  VMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]1.6e-7870.12Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MA+SS+ IPPSKS  HFL  CFRSS KL  KK S IAPR RRT S +FRFKKSSATVPVD A PSH+ELSF P+FKK PPL  I P+ P VGGEIVVDS 
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI
           +KPSQTRKK  STQSNFT +KLSP +KT ALLHSVSLPSQ L RQ   KK VS +LPAAVAT +PAFSD +KP P LPT  P KNFDRVI++V+VAI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI

Query:  VVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRIS
        V+LWGRLCAILCT ALFYL RR+RSEI P+  G  G GR+S
Subjt:  VVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRIS

XP_022934627.1 uncharacterized protein LOC111441760 [Cucurbita moschata]5.9e-5759.68Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MAESSD     K R HFL RCFRSSP +  +K  PIA  NRRT SL FRFKKSSATVP+DAAVP H+ELS SP+F  PPP PLI        GEI+VDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSN----FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHKPAPNLPTNSPAKNFDRVIVI
        CK IKPS+TRKKSESTQSN     T    +  KKT+  LHS          +  LKKS+S+LP A A +  +   SDR KP    PTNSP K FD VIVI
Subjt:  CKPIKPSQTRKKSESTQSN----FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHKPAPNLPTNSPAKNFDRVIVI

Query:  VMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS
        V VAIVVLWGRLCAILCTAALFYLRR LRS  E+     G G  GR+S
Subjt:  VMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS

XP_022982640.1 uncharacterized protein LOC111481455 [Cucurbita maxima]4.5e-5759.09Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MAESSD     K R HFL RCFRSSP +  +K   IA  NRRT SL FRFKK SATVP+DAAVP H+ELSFSP+F  PPP         P+ GEI+VDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIV
        CK IK S+TRKKSESTQSN T EKL P KKT+  LHS          +  LKKS+S+LP AVA   P  S     +   PTNSP   FD V VIV VAIV
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIV

Query:  VLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS
        VLWGRLCAILCTAALFYLRR LRS  E+     G G  G++S
Subjt:  VLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein7.7e-7970.12Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MA+SS+ IPPSKS  HFL  CFRSS KL  KK S IAPR RRT S +FRFKKSSATVPVD A PSH+ELSF P+FKK PPL  I P+ P VGGEIVVDS 
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI
           +KPSQTRKK  STQSNFT +KLSP +KT ALLHSVSLPSQ L RQ   KK VS +LPAAVAT +PAFSD +KP P LPT  P KNFDRVI++V+VAI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI

Query:  VVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRIS
        V+LWGRLCAILCT ALFYL RR+RSEI P+  G  G GR+S
Subjt:  VVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRIS

A0A5A7UA28 60S ribosomal protein L441.6e-8473.64Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MA+SS K PPSKS   FL  CFRSS KL  KKPS IAPRNRRTFSL+FRFKKSSATVPVD A PSH+ELSFSPDFKKPPPL LITP+ P V GEIVVDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI
         + +KPSQTRKK ESTQSNFT +KLSP +K  A LHSVS PSQLL RQ D K+SVS +LPAAVAT +PAFSD +KP P L TN P KN DRVI++VMVAI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI

Query:  VVLWGRLCAILCTAALFYLRRRLRSEI-VPESSGRGGLG
        +VLWGRLCAILCT ALFYL RR+RSE+ V    GRGG G
Subjt:  VVLWGRLCAILCTAALFYLRRRLRSEI-VPESSGRGGLG

A0A6J1F3C2 uncharacterized protein LOC1114417602.9e-5759.68Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MAESSD     K R HFL RCFRSSP +  +K  PIA  NRRT SL FRFKKSSATVP+DAAVP H+ELS SP+F  PPP PLI        GEI+VDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSN----FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHKPAPNLPTNSPAKNFDRVIVI
        CK IKPS+TRKKSESTQSN     T    +  KKT+  LHS          +  LKKS+S+LP A A +  +   SDR KP    PTNSP K FD VIVI
Subjt:  CKPIKPSQTRKKSESTQSN----FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHKPAPNLPTNSPAKNFDRVIVI

Query:  VMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS
        V VAIVVLWGRLCAILCTAALFYLRR LRS  E+     G G  GR+S
Subjt:  VMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS

A0A6J1GBH7 uncharacterized protein LOC1114526504.1e-5658.65Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPS-----HNELSFSPDFKKPPPLPLITPRTPPVGGEI
        MAE+S+K+ PSK   HFLLRCF SSPK+  KK      R+ R  S  FRFKKSSATVP+D AVP       ++ SFSP+FKKPPP PLI  R P V  +I
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPS-----HNELSFSPDFKKPPPLPLITPRTPPVGGEI

Query:  VVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIV
        V     + IKPSQ  KK+EST+S+F    L+P K+T ALLHS+SLPS+ LNRQ D KK+VS+L +AV T  P  S+R KPA   P NSPAK  D +IVIV
Subjt:  VVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIV

Query:  MVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSG
         VAIVVLWG+LCAILCT ALFY  RRLRSE   E  G
Subjt:  MVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSG

A0A6J1IZW6 uncharacterized protein LOC1114814552.2e-5759.09Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG
        MAESSD     K R HFL RCFRSSP +  +K   IA  NRRT SL FRFKK SATVP+DAAVP H+ELSFSP+F  PPP         P+ GEI+VDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIV
        CK IK S+TRKKSESTQSN T EKL P KKT+  LHS          +  LKKS+S+LP AVA   P  S     +   PTNSP   FD V VIV VAIV
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIV

Query:  VLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS
        VLWGRLCAILCTAALFYLRR LRS  E+     G G  G++S
Subjt:  VLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGRIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGC
CCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCCGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGG
ACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCACCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGG
AAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCG
CCAGAATGATTTGAAAAAATCTGTCTCTTATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTC
CGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGT
CGCCTGAGATCGGAAATCGTACCGGAAAGCAGCGGCAGAGGTGGTTTGGGGCGAATATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGC
CCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCCGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGG
ACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCACCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGG
AAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCG
CCAGAATGATTTGAAAAAATCTGTCTCTTATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTC
CGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGT
CGCCTGAGATCGGAAATCGTACCGGAAAGCAGCGGCAGAGGTGGTTTGGGGCGAATATCTTGA
Protein sequenceShow/hide protein sequence
MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTR
KKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRR
RLRSEIVPESSGRGGLGRIS