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ClCG10G018410 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G018410
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRegulatory particle non-ATPase 10
Genome locationCG_Chr10:33423098..33424704
RNA-Seq ExpressionClCG10G018410
SyntenyClCG10G018410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2403564.1 uncharacterized protein HKW66_Vig0188510 [Vigna angularis]1.1e-1947.47Show/hide
Query:  EVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSD
        E D   A  VE+V  GDE + LP D AV  D +   +   VL +    EG D   G+ D+R PNVD+ +AL+  RD G+E  LL  V  V  E VVVDSD
Subjt:  EVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSD

Query:  AAVGVASGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED
          V VA  + + E G +E GDGGVEGV+GDVLK E   GG+ED P +++ E+DKE+ED
Subjt:  AAVGVASGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED

KOM33993.1 hypothetical protein LR48_Vigan02g014300 [Vigna angularis]1.1e-1947.47Show/hide
Query:  EVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSD
        E D   A  VE+V  GDE + LP D AV  D +   +   VL +    EG D   G+ D+R PNVD+ +AL+  RD G+E  LL  V  V  E VVVDSD
Subjt:  EVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSD

Query:  AAVGVASGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED
          V VA  + + E G +E GDGGVEGV+GDVLK E   GG+ED P +++ E+DKE+ED
Subjt:  AAVGVASGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED

KZM99200.1 hypothetical protein DCAR_013438 [Daucus carota subsp. sativus]1.9e-2147.62Show/hide
Query:  IRTEVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVV
        I T+ D      + ++P   E S+ P   ++  D +       VL QR     R R  G+ ++R P+V V +ALV   D G  SDLL PV   DVE+VVV
Subjt:  IRTEVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVV

Query:  DSDAAVGVASGDSEEEIGGEEAGDGG-VEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDEDADDGAD
        DSD AVGV+  D + E+GGEE GDGG VEGVDG VL+ E+GL G E+GPDDE+GEE  E++D +DGAD
Subjt:  DSDAAVGVASGDSEEEIGGEEAGDGG-VEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDEDADDGAD

PON97416.1 hypothetical protein TorRG33x02_068830 [Trema orientale]2.1e-2054.68Show/hide
Query:  LVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDE-----RGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVA
        +V   DE +HLP   AVD + E   +   VL QR   EG +R  G GDE     R P+VDVL+ALV  RD G+  DLLV VD  DVE VVVD D  V VA
Subjt:  LVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDE-----RGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVA

Query:  SGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGP
         GD + E+GG+E GDGGVEGVDGDVL+ ESGL G + GP
Subjt:  SGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGP

RXH76386.1 hypothetical protein DVH24_019274 [Malus domestica]4.6e-2353.74Show/hide
Query:  LVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVASGDSE
        +VP GDE + LPPD AV  D++  R G+ VL Q       D   G+ DER P+VDVL+ALV  RD+  E DLL  V  VDVE VVVD+D  V V+ GD +
Subjt:  LVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVASGDSE

Query:  EEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED
         E GGE+ G GGVE  DGDVL+ E+GLGG EDGP DED +++ E ED
Subjt:  EEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED

TrEMBL top hitse value%identityAlignment
A0A0A0LE53 Uncharacterized protein3.6e-5884.08Show/hide
Query:  VRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVAS
        +RVELVPP DEAS LP +LAV+FDQEHQ SGVPVL+Q RTDEGRDRHGG+GDERGP VDVLMALVE RDDG ESDLLV VD VDVE VVVDSD+AV VA 
Subjt:  VRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVAS

Query:  GDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDEDADDGAD
        G+SEEEIGGEEAGDGGVEGVDGDVLK ESG GG EDGPDDEDGEED+EDEDADD AD
Subjt:  GDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDEDADDGAD

A0A0L9TTU3 Uncharacterized protein5.2e-2047.47Show/hide
Query:  EVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSD
        E D   A  VE+V  GDE + LP D AV  D +   +   VL +    EG D   G+ D+R PNVD+ +AL+  RD G+E  LL  V  V  E VVVDSD
Subjt:  EVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSD

Query:  AAVGVASGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED
          V VA  + + E G +E GDGGVEGV+GDVLK E   GG+ED P +++ E+DKE+ED
Subjt:  AAVGVASGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED

A0A162ADF4 Uncharacterized protein9.4e-2247.62Show/hide
Query:  IRTEVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVV
        I T+ D      + ++P   E S+ P   ++  D +       VL QR     R R  G+ ++R P+V V +ALV   D G  SDLL PV   DVE+VVV
Subjt:  IRTEVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVV

Query:  DSDAAVGVASGDSEEEIGGEEAGDGG-VEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDEDADDGAD
        DSD AVGV+  D + E+GGEE GDGG VEGVDG VL+ E+GL G E+GPDDE+GEE  E++D +DGAD
Subjt:  DSDAAVGVASGDSEEEIGGEEAGDGG-VEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDEDADDGAD

A0A2P5FI15 Uncharacterized protein1.0e-2054.68Show/hide
Query:  LVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDE-----RGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVA
        +V   DE +HLP   AVD + E   +   VL QR   EG +R  G GDE     R P+VDVL+ALV  RD G+  DLLV VD  DVE VVVD D  V VA
Subjt:  LVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDE-----RGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVA

Query:  SGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGP
         GD + E+GG+E GDGGVEGVDGDVL+ ESGL G + GP
Subjt:  SGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGP

A0A498HYB9 Uncharacterized protein2.2e-2353.74Show/hide
Query:  LVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVASGDSE
        +VP GDE + LPPD AV  D++  R G+ VL Q       D   G+ DER P+VDVL+ALV  RD+  E DLL  V  VDVE VVVD+D  V V+ GD +
Subjt:  LVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMALVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVASGDSE

Query:  EEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED
         E GGE+ G GGVE  DGDVL+ E+GLGG EDGP DED +++ E ED
Subjt:  EEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATCTTAAAAACTCAAACACTAACGTCGCATCTCTGAACCACCTGGTACTTCACGTTATATTGAACAATCGACCCGTCTCCGGTCGCCGGATACGCACC
GAAGTTGATAACCACCGGGCAGTTCGCGTGGAATTGGTACCGCCCGGTGATGAAGCTTCCCACCTTCCACCGGACCTTGCCGTCGATTTTGACCAGGAGCATCAG
CGCTCCGGCGTCCCGGTCCTGGTTCAGCGCCGAACTGATGAAGGGCGCGACCGGCACGGCGGTTCCGGAGACGAAAGGGGACCAAACGTTGACGTCCTTATGGCC
TTGGTAGAACCGAGGGATGATGGTTCGGAGAGTGATCTGTTGGTTCCGGTAGATAGCGTAGACGTGGAGGTCGTCGTAGTAGATTCCGATGCGGCGGTTGGGGTT
GCGAGCGGAGACAGTGAGGAGGAAATTGGAGGTGAGGAAGCTGGGGACGGTGGCGTTGAAGGCGTAGACGGTGACGTCTTGAAGGTAGAAAGTGGGCTTGGTGGG
GCGGAGGACGGCCCAGACGATGAGGATGGTGAGGAGGACAAGGAAGATGAAGATGCAGACGATGGTGCCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCATCTTAAAAACTCAAACACTAACGTCGCATCTCTGAACCACCTGGTACTTCACGTTATATTGAACAATCGACCCGTCTCCGGTCGCCGGATACGCACC
GAAGTTGATAACCACCGGGCAGTTCGCGTGGAATTGGTACCGCCCGGTGATGAAGCTTCCCACCTTCCACCGGACCTTGCCGTCGATTTTGACCAGGAGCATCAG
CGCTCCGGCGTCCCGGTCCTGGTTCAGCGCCGAACTGATGAAGGGCGCGACCGGCACGGCGGTTCCGGAGACGAAAGGGGACCAAACGTTGACGTCCTTATGGCC
TTGGTAGAACCGAGGGATGATGGTTCGGAGAGTGATCTGTTGGTTCCGGTAGATAGCGTAGACGTGGAGGTCGTCGTAGTAGATTCCGATGCGGCGGTTGGGGTT
GCGAGCGGAGACAGTGAGGAGGAAATTGGAGGTGAGGAAGCTGGGGACGGTGGCGTTGAAGGCGTAGACGGTGACGTCTTGAAGGTAGAAAGTGGGCTTGGTGGG
GCGGAGGACGGCCCAGACGATGAGGATGGTGAGGAGGACAAGGAAGATGAAGATGCAGACGATGGTGCCGATTAG
Protein sequenceShow/hide protein sequence
MDHLKNSNTNVASLNHLVLHVILNNRPVSGRRIRTEVDNHRAVRVELVPPGDEASHLPPDLAVDFDQEHQRSGVPVLVQRRTDEGRDRHGGSGDERGPNVDVLMA
LVEPRDDGSESDLLVPVDSVDVEVVVVDSDAAVGVASGDSEEEIGGEEAGDGGVEGVDGDVLKVESGLGGAEDGPDDEDGEEDKEDEDADDGAD