CuGenDBv2

Gene ID	ClCG10G018590
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	40S ribosomal protein S17-like
Genome location	CG_Chr10:33618019..33620744
RNA-Seq Expression	ClCG10G018590
Synteny	ClCG10G018590
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0015074 - DNA integration (biological process) GO:0005840 - ribosome (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001210 - Ribosomal protein S17e IPR018273 - Ribosomal protein S17e, conserved site IPR036401 - Ribosomal protein S17e-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8651099.1 hypothetical protein Csa_001438 [Cucumis sativus]

6.6e-66

98.52

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

XP_004136500.1 40S ribosomal protein S17 [Cucumis sativus]

6.6e-66

98.52

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

XP_008442886.1 PREDICTED: 40S ribosomal protein S17-like [Cucumis melo]

3.9e-66

99.26

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

XP_022144698.1 40S ribosomal protein S17-like [Momordica charantia]

3.9e-66

99.26

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

XP_038904935.1 40S ribosomal protein S17-like [Benincasa hispida]

2.3e-66

98.52

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD+SA+KTDQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LB02 40S ribosomal protein S17

3.2e-66

98.52

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

A0A1S3B6R7 40S ribosomal protein S17-like

1.9e-66

99.26

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

A0A5A7TQK2 40S ribosomal protein S17-like

1.9e-66

99.26

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

A0A6J1CU03 40S ribosomal protein S17-like

1.9e-66

99.26

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

A0A6J1FC93 40S ribosomal protein S17-like

6.0e-65

97.04

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVD+
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETLDMLSALGM DIPG+VQVDPTVPQQV FGLGGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

SwissProt top hits

e value

%identity

Alignment

P49205 40S ribosomal protein S17-1

2.1e-54

89.34

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D  G+  VDP
Subjt:  ETLDMLSALGMNDIPGLVQVDP

P49215 40S ribosomal protein S17

1.7e-56

85.51

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD IEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQV----GFGLGG
        ETLDMLSALGM+D+PG+V+     PQ V     +G GG
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQV----GFGLGG

Q9LZ17 40S ribosomal protein S17-4

4.2e-55

89.34

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

Q9SJ36 40S ribosomal protein S17-2

9.3e-55

82.22

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETL+ML++LGM+D  G+  V+P          GGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

Q9SQZ1 40S ribosomal protein S17-3

1.3e-53

88.43

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIK D ++VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVD
        ETL+ML++LGM+DI G+ QV+
Subjt:  ETLDMLSALGMNDIPGLVQVD

Arabidopsis top hits

e value

%identity

Alignment

AT2G05220.1 Ribosomal S17 family protein

6.6e-56

82.22

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETL+ML++LGM+D  G+  V+P          GGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

AT5G04800.1 Ribosomal S17 family protein

3.0e-56

89.34

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

AT5G04800.2 Ribosomal S17 family protein

3.0e-56

89.34

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

AT5G04800.3 Ribosomal S17 family protein

3.0e-56

89.34

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

AT5G04800.4 Ribosomal S17 family protein

3.0e-56

89.34

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAATGATTCTGCGCTCCGATTTGCCGCCTCTTCTTCCGCCGTCGCCTGAACACACTTTCCACTATTCCTACGGCAGCAACATGGGTCGCGTTCGAACCAAA
ACAGTGAAGAAATCTTCCCGTCAAGTTATTGAGCGCTACTACTCGCGCATGACCCTCGACTTCCATACGAACAAGAAGATCCTCGAAGAAGTTGCCATTATTCCC
TCTAAGAGACTACGAAATAAGATCGCCGGATTCTCAACTCACCTCATGAAGCGGATCCAGAAGGGACCTGTTCGCGGCATTTCTCTCAAACTTCAAGAGGAAGAG
CGCGAGCGCCGTATGGATTTCGTCCCCGACGTCTCCGCCATTAAAACCGATCAAATCGAAGTCGACAAGGAGACCCTCGATATGCTTTCTGCGCTTGGAATGAAC
GATATTCCCGGGCTTGTTCAGGTCGATCCGACTGTGCCGCAGCAGGTTGGATTTGGATTGGGAGGTCGCGTTGTCAAATTCACCACATATTTTCAAAATCACTAA

mRNA sequence

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Protein sequence

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MEMILRSDLPPLLPPSPEHTFHYSYGSNMGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEE
RERRMDFVPDVSAIKTDQIEVDKETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRVVKFTTYFQNH

ClCG10G018590 (gene) of Watermelon (Charleston Gray) v2.5 genome