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ClCG10G019330 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG10G019330
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPhytosulfokine-beta
Genome locationCG_Chr10:34329262..34330045
RNA-Seq ExpressionClCG10G019330
SyntenyClCG10G019330
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0008283 - cell population proliferation (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580671.1 hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3382.98Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHGFFFFFF  FLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQADSWPD PHI+GGRE GEEEEE WEKRKMMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQN

XP_022935155.1 uncharacterized protein LOC111442110 [Cucurbita moschata]1.1e-3382.29Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK
        MNQ+SHGFFFFFF  FLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQADSWPD PHI+GGRE GEEEEE WEKRKMMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK

XP_022983167.1 uncharacterized protein LOC111481800 [Cucurbita maxima]8.5e-3180.41Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEE-WEKRKMMLEAHLDYVYTQNEK
        MNQ+SHGFFFFFF  FLFIFLLF S S SARFP +KQG+ ETH+KL+HG+VQADSW D PHI+GGRE GEEEEEE WEKRKMMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEE-WEKRKMMLEAHLDYVYTQNEK

XP_023528216.1 putative phytosulfokines 6 [Cucurbita pepo subsp. pepo]7.0e-3380.21Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK
        MNQ+SHGFFFFFF  FLFIFLLF S SASARFP +KQG+ ETH+KL+HG+VQADSW D PH++GGRE GEEEEE WEKRKMMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK

XP_038906014.1 uncharacterized protein LOC120091917 [Benincasa hispida]7.7e-4084.11Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENG----------EEEEEEWEKRKMMLEAHLDYV
        MNQNSHGFFFFFF+ FLFIFLLFSSHSASARFP SKQGIEETHKK+SHGMVQADSWPD PHIMGGRE G          EEEEEEWEK KMMLEAHLDYV
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENG----------EEEEEEWEKRKMMLEAHLDYV

Query:  YTQNEKP
        YTQNEKP
Subjt:  YTQNEKP

TrEMBL top hitse value%identityAlignment
A0A1S4DUI1 Phytosulfokine-beta3.0e-2973.79Show/hide
Query:  NQNSHGFFFFFFIF-----FLFIFLLFSSHSASARFPPSKQGIEETHKKLSHG-MVQA-DSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQN
        N+NSHGFFFFFF F     FLFI LLFSSHSASARFPPSK GIEETHKK+S+G MVQ+ DSWPD PH+   ++  E EEEE EKRKMMLEAHLDYVYTQ+
Subjt:  NQNSHGFFFFFFIF-----FLFIFLLFSSHSASARFPPSKQGIEETHKKLSHG-MVQA-DSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQN

Query:  EKP
        E P
Subjt:  EKP

A0A6J1F9T2 Phytosulfokine-beta5.2e-3482.29Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK
        MNQ+SHGFFFFFF  FLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQADSWPD PHI+GGRE GEEEEE WEKRKMMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK

A0A6J1FSF0 Phytosulfokine-beta2.2e-2468.04Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP
        MNQ+SHG FF F         L  S SA+ARF P+KQG EETH KLSHGM+Q DSWPD P I+  RE  EEE+EEWEKR+MMLEAHLDYVYTQNEKP
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP

A0A6J1IYI6 Phytosulfokine-beta4.1e-3180.41Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEE-WEKRKMMLEAHLDYVYTQNEK
        MNQ+SHGFFFFFF  FLFIFLLF S S SARFP +KQG+ ETH+KL+HG+VQADSW D PHI+GGRE GEEEEEE WEKRKMMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEE-WEKRKMMLEAHLDYVYTQNEK

A0A6J1KTY7 Phytosulfokine-beta6.8e-2672.16Show/hide
Query:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP
        MNQ+SHGF  FF+ FF+F+ L   S SA+ARF P+KQG EETH KLSHGM+QADSWPD P I+  RE  EEE+EEWEKR+MMLEAHLDYVYTQNEKP
Subjt:  MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTTTTCATCTTTTTTCTCTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGCTCGTTTTCCACCATCC
AAACAAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGATTCATGGCCAGATTCCCCCCATATAATGGGAGGAAGAGAGAATGGAGAA
GAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCACATTTGGATTATGTTTACACACAAAATGAGAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTCTTTTTTCTTTTTTCCTCCATTCCCACTGGACATATTCCCCTGTTTTTCTTTCTAACAATCATTTCTTTCATTCTCACTCCAAAAACACAATTAAGA
GATAGAGAAAAAAATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTTTTCATCTTTTTTCTCTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGCTCG
TTTTCCACCATCCAAACAAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGATTCATGGCCAGATTCCCCCCATATAATGGGAGGAAG
AGAGAATGGAGAAGAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCACATTTGGATTATGTTTACACACAAAATGAGAAGCCTTGAATCTAATT
GAATTTTCAATGATATGTTTTATGTACATATCCAAATACTAAAAGAATTATTGCTGGTTTCATCATTTTATCATTTATGGATATATAGTTTTATATTGTTTA
Protein sequenceShow/hide protein sequence
MNQNSHGFFFFFFIFFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP