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ClCG11G000080 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G000080
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description4-diphosphocytidyl-2C-methyl-D-erythritol synthase
Genome locationCG_Chr11:99657..99881
RNA-Seq ExpressionClCG11G000080
SyntenyClCG11G000080
Gene Ontology termsGO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054191.1 hypothetical protein E6C27_scaffold131G001270 [Cucumis melo var. makuwa]2.3e-2890.54Show/hide
Query:  MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH
        MGGG CIGMVVVRRRGRIDPVV+LLADKVDAES+EGDAEARGG+TELIG+H MLPP ISPPEELSRRSQRLIRH
Subjt:  MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH

KAG4941981.1 hypothetical protein JHK85_046627 [Glycine max]3.0e-1271.7Show/hide
Query:  RRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSR
        R G I+P+VDL AD+VD E D+GDA+ARGGV ELIGEHRMLPP I  PEELS+
Subjt:  RRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSR

KAG6597022.1 hypothetical protein SDJN03_10202, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2175.68Show/hide
Query:  MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH
        MGGG  I MV+VR R R+DPV+ LLA+KVDAES+E DAEAR G++ELIGEHRMLPPL+ PPEELS RSQRLIRH
Subjt:  MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH

KYP52102.1 hypothetical protein KK1_026012, partial [Cajanus cajan]2.7e-1376.36Show/hide
Query:  VRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSR
        VRRR RI+ VVDLLAD+VDA+ DEGDAE RGGVT+LI +HRMLPP I  PEELSR
Subjt:  VRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSR

RDX82049.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, partial [Mucuna pruriens]1.4e-1269.49Show/hide
Query:  VRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQR
        VRRR RI+ VVDL  D+V+A+ DEGDA+ARGGVTELI +HRMLPP I PPEEL R   R
Subjt:  VRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQR

TrEMBL top hitse value%identityAlignment
A0A0A0KP64 Uncharacterized protein1.4e-2687.84Show/hide
Query:  MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH
        MGGG CIGMVVVRRR RIDPVV+LLADKVDAES+EGDAEAR GVTELIG+H MLPP ISPPEELSRRSQRLI H
Subjt:  MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH

A0A151SBB2 Uncharacterized protein (Fragment)1.3e-1376.36Show/hide
Query:  VRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSR
        VRRR RI+ VVDLLAD+VDA+ DEGDAE RGGVT+LI +HRMLPP I  PEELSR
Subjt:  VRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSR

A0A371FUN4 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (Fragment)6.6e-1369.49Show/hide
Query:  VRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQR
        VRRR RI+ VVDL  D+V+A+ DEGDA+ARGGVTELI +HRMLPP I PPEEL R   R
Subjt:  VRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQR

A0A5A7UKX3 Uncharacterized protein1.1e-2890.54Show/hide
Query:  MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH
        MGGG CIGMVVVRRRGRIDPVV+LLADKVDAES+EGDAEARGG+TELIG+H MLPP ISPPEELSRRSQRLIRH
Subjt:  MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH

A0A5N5HLF1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase8.1e-1167.86Show/hide
Query:  DPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH
        + VVDLLAD+VDAE +E DA+A  GV ELIGEHRMLPPL+ PPEEL  R Q   RH
Subjt:  DPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCGGACGATGCATCGGCATGGTGGTGGTGAGAAGAAGAGGGAGAATTGATCCTGTTGTAGACTTGCTCGCCGACAAGGTAGATGCCGAAAGCGACGAGGGCGA
TGCCGAGGCCAGGGGTGGCGTGACGGAACTGATTGGTGAGCATCGGATGCTTCCTCCACTCATCTCTCCTCCTGAAGAACTCTCCCGTCGATCCCAAAGGCTTATTCGCC
ATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCGGACGATGCATCGGCATGGTGGTGGTGAGAAGAAGAGGGAGAATTGATCCTGTTGTAGACTTGCTCGCCGACAAGGTAGATGCCGAAAGCGACGAGGGCGA
TGCCGAGGCCAGGGGTGGCGTGACGGAACTGATTGGTGAGCATCGGATGCTTCCTCCACTCATCTCTCCTCCTGAAGAACTCTCCCGTCGATCCCAAAGGCTTATTCGCC
ATTGA
Protein sequenceShow/hide protein sequence
MGGGRCIGMVVVRRRGRIDPVVDLLADKVDAESDEGDAEARGGVTELIGEHRMLPPLISPPEELSRRSQRLIRH