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ClCG11G000180 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G000180
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr11:245951..247220
RNA-Seq ExpressionClCG11G000180
SyntenyClCG11G000180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646271.1 hypothetical protein Csa_023831, partial [Cucumis sativus]1.9e-1147.56Show/hide
Query:  RKKAETEEFSEDKKWEFDFAFDCEVAVIIKKINGEVDWEVLKKVFDRPQFLKFDIRIFYANLAVGICDSKLEAKDLVCLGSS
        R + E +    D+    DF F C   +IIKK+   +DW VLK++F++P ++     IF ANLAVGICDS  EAKDL+ LGSS
Subjt:  RKKAETEEFSEDKKWEFDFAFDCEVAVIIKKINGEVDWEVLKKVFDRPQFLKFDIRIFYANLAVGICDSKLEAKDLVCLGSS
TYK14183.1 hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa]2.4e-1132.34Show/hide
Query:  KAETEEFSEDKKWEFDFAFDCEVAVIIKKINGEVDWEVLKKVFDRPQFLKFDIRIFYANLAVGICDSKLEAKD------------LVCLGSSLNFQDFIF
        +  T+E  +D     +FAF+ +  VIIKK+    DW  LK++ ++P  +  + + F ANLAVGI  S  EAK+            + C G       F  
Subjt:  KAETEEFSEDKKWEFDFAFDCEVAVIIKKINGEVDWEVLKKVFDRPQFLKFDIRIFYANLAVGICDSKLEAKD------------LVCLGSSLNFQDFIF

Query:  QHWDFRMVEAERKQVCFKAKDNEDSFIPMGCYVNQSELAFPMRFYVGRNWEKDDQRRLEKSSIEAAL
         +W         ++VCFKA  NED F+   C VN  E +F  RF +G + E + Q   +  +  AAL
Subjt:  QHWDFRMVEAERKQVCFKAKDNEDSFIPMGCYVNQSELAFPMRFYVGRNWEKDDQRRLEKSSIEAAL
TrEMBL top hitse value%identityAlignment
A0A5D3CQQ0 Uncharacterized protein1.2e-1132.34Show/hide
Query:  KAETEEFSEDKKWEFDFAFDCEVAVIIKKINGEVDWEVLKKVFDRPQFLKFDIRIFYANLAVGICDSKLEAKD------------LVCLGSSLNFQDFIF
        +  T+E  +D     +FAF+ +  VIIKK+    DW  LK++ ++P  +  + + F ANLAVGI  S  EAK+            + C G       F  
Subjt:  KAETEEFSEDKKWEFDFAFDCEVAVIIKKINGEVDWEVLKKVFDRPQFLKFDIRIFYANLAVGICDSKLEAKD------------LVCLGSSLNFQDFIF

Query:  QHWDFRMVEAERKQVCFKAKDNEDSFIPMGCYVNQSELAFPMRFYVGRNWEKDDQRRLEKSSIEAAL
         +W         ++VCFKA  NED F+   C VN  E +F  RF +G + E + Q   +  +  AAL
Subjt:  QHWDFRMVEAERKQVCFKAKDNEDSFIPMGCYVNQSELAFPMRFYVGRNWEKDDQRRLEKSSIEAAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATTATTTTCTTTCAAGTGCTTGAAAACTCTAGGGGAAGATTTGCACTATTGTCTCTCGAATCATTCAAGGGGCGAAGGACAAGGGTCTTTGTTCCTGAAGGCAAG
AAAGGAAGTGGATGGAGATTATTGGCAGGGAAGGGAAGTCGATGCCAGGGAAGGAAATAGGCTTGTGATGGAGGCGGAAAGGAAAAAGGCAGAGACAGAAGAGTTCTCAG
AAGATAAGAAGTGGGAGTTCGATTTTGCGTTTGATTGTGAAGTGGCGGTGATCATTAAGAAGATTAATGGGGAAGTGGATTGGGAGGTTCTAAAGAAAGTTTTCGATCGG
CCACAGTTTCTCAAATTCGATATTAGAATTTTCTATGCGAACTTAGCAGTGGGCATTTGCGATTCAAAGTTGGAGGCGAAGGATCTAGTTTGTTTGGGTTCCTCCCTCAA
CTTTCAAGATTTTATTTTCCAACATTGGGATTTCCGAATGGTGGAAGCGGAAAGGAAACAGGTTTGCTTTAAGGCGAAAGATAATGAGGACAGTTTCATTCCGATGGGAT
GTTATGTTAATCAATCGGAGTTGGCATTTCCGATGAGGTTCTACGTCGGCCGAAATTGGGAAAAAGACGATCAGAGGCGGTTAGAGAAATCTTCGATTGAAGCTGCTTTG
AGGCCTCCCTCGTCTGTTGAGAACATCAGGGCCCAAGAAGGGCTTCAAGCCCATGAGTCGATTACTCAGTCCACTCTTACTCCATTCGAATTAGAGGCCCATTTTACTAG
AGTCTTGGAAGAACATCAAGGAATGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGATTATTTTCTTTCAAGTGCTTGAAAACTCTAGGGGAAGATTTGCACTATTGTCTCTCGAATCATTCAAGGGGCGAAGGACAAGGGTCTTTGTTCCTGAAGGCAAG
AAAGGAAGTGGATGGAGATTATTGGCAGGGAAGGGAAGTCGATGCCAGGGAAGGAAATAGGCTTGTGATGGAGGCGGAAAGGAAAAAGGCAGAGACAGAAGAGTTCTCAG
AAGATAAGAAGTGGGAGTTCGATTTTGCGTTTGATTGTGAAGTGGCGGTGATCATTAAGAAGATTAATGGGGAAGTGGATTGGGAGGTTCTAAAGAAAGTTTTCGATCGG
CCACAGTTTCTCAAATTCGATATTAGAATTTTCTATGCGAACTTAGCAGTGGGCATTTGCGATTCAAAGTTGGAGGCGAAGGATCTAGTTTGTTTGGGTTCCTCCCTCAA
CTTTCAAGATTTTATTTTCCAACATTGGGATTTCCGAATGGTGGAAGCGGAAAGGAAACAGGTTTGCTTTAAGGCGAAAGATAATGAGGACAGTTTCATTCCGATGGGAT
GTTATGTTAATCAATCGGAGTTGGCATTTCCGATGAGGTTCTACGTCGGCCGAAATTGGGAAAAAGACGATCAGAGGCGGTTAGAGAAATCTTCGATTGAAGCTGCTTTG
AGGCCTCCCTCGTCTGTTGAGAACATCAGGGCCCAAGAAGGGCTTCAAGCCCATGAGTCGATTACTCAGTCCACTCTTACTCCATTCGAATTAGAGGCCCATTTTACTAG
AGTCTTGGAAGAACATCAAGGAATGAGATAG
Protein sequenceShow/hide protein sequence
MRLFSFKCLKTLGEDLHYCLSNHSRGEGQGSLFLKARKEVDGDYWQGREVDAREGNRLVMEAERKKAETEEFSEDKKWEFDFAFDCEVAVIIKKINGEVDWEVLKKVFDR
PQFLKFDIRIFYANLAVGICDSKLEAKDLVCLGSSLNFQDFIFQHWDFRMVEAERKQVCFKAKDNEDSFIPMGCYVNQSELAFPMRFYVGRNWEKDDQRRLEKSSIEAAL
RPPSSVENIRAQEGLQAHESITQSTLTPFELEAHFTRVLEEHQGMR