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ClCG11G003733 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G003733
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCG_Chr11:3877445..3878747
RNA-Seq ExpressionClCG11G003733
SyntenyClCG11G003733
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605019.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]5.1e-4292.63Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]5.1e-4292.63Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]6.7e-4292.63Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]6.7e-4291.58Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAF+DLTSRLQ
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

XP_038900563.1 auxin-responsive protein SAUR21-like [Benincasa hispida]8.7e-4291.67Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQA
        MGIRLLSLVP AKQILKMQ  FTKSQLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQQLLSHAEEEFGFHH QG +TIPCKEDAFIDLTSRLQA
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQA

TrEMBL top hitse value%identityAlignment
A0A6J1FVI4 auxin-responsive protein SAUR24-like7.2e-4291.58Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        MGIR LSLVP AKQILKMQSGFTK+QLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHH QG LTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

A0A6J1G6T7 auxin-responsive protein SAUR24-like2.5e-4292.63Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

A0A6J1G6U1 auxin-responsive protein SAUR23-like5.5e-4292.55Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRL
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAF+DLTSRL
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRL

A0A6J1JHE3 auxin-responsive protein SAUR24-like7.2e-4291.58Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        MGIR LSLVP AKQILKMQSGFTK+QLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHH QG LTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

A0A6J1KZJ6 auxin-responsive protein SAUR24-like3.2e-4292.63Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR234.4e-2057.83Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRL
        AK+IL   +    +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSRL
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR221.5e-2059.49Show/hide
Query:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +E+EFGF H  G LTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR208.8e-2160.76Show/hide
Query:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +A+YVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSR Q
Subjt:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR193.3e-2059.49Show/hide
Query:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +A+YVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR242.3e-2159.52Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        AK+IL   +G   +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.9e-2456.84Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRL
        M IR+  ++  +KQ+LK  S  + + + +PKGH+A+YVGE +Q++RFVVP+TYL+HP FQ+LL  AEEEFGF H  G LTIPC E  FIDL SRL
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRL

AT4G34790.1 SAUR-like auxin-responsive protein family2.8e-2251.4Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLD-----------VPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFI
        MG+ + S++P AKQI K QS   K+              VPKGHVA+YVGE +++KRFVVPI+YLNHP F++ L+ AEEE GFHH  G LTIPC+E++F+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLD-----------VPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFI

Query:  DLTSRLQ
         L +  Q
Subjt:  DLTSRLQ

AT4G34810.1 SAUR-like auxin-responsive protein family1.1e-2353.33Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLD------VPKGHVAIYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   +++        VPKGHVA+YVG   E+++KRFVVPI++LNHPSF++ LS AEEEFGF+H  G LTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLD------VPKGHVAIYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.8e-2456.7Show/hide
Query:  MGIRLLSLVPRAKQILK----MQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSR
        M IR+  ++  +KQIL+    + S  + S LDVPKG++A+YVGE   KRFVVP++YL+ PSFQ LL  AEEEFGF H  G LTIPC E+ FIDL SR
Subjt:  MGIRLLSLVPRAKQILK----MQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family1.6e-2259.52Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ
        AK+IL   +G   +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCGTGCCAAGCAGATCTTAAAGATGCAGTCAGGATTTACCAAAAGTCAGTTGGATGTGCCAAAAGGACATGTAGCTATTTA
CGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCAATAACGTACCTAAACCATCCATCATTCCAACAACTTCTCAGCCACGCAGAGGAAGAGTTTGGTTTCCATCATC
TACAGGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTCGATTGCAAGCTGTTACAACTAAATCAAGCTCATGTCCCCAAAGGTCACAGTGC
AATCTATGTTGGAGAAATTCAAAGGAAGCCATTTTGGTTCCATTTCCATTATCATATTTGAATCATCCAACATTTATTTGTTTGATTACGAATGTTGAGGAGTGTAGATA
CAGCCATTGCATGGGTGGTTTGACAGTTCCCAGCAGAGGATTTGCTTTGATCTCACTTCAAGGCTGCACAGTTCTTGAAAGATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCGTGCCAAGCAGATCTTAAAGATGCAGTCAGGATTTACCAAAAGTCAGTTGGATGTGCCAAAAGGACATGTAGCTATTTA
CGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCAATAACGTACCTAAACCATCCATCATTCCAACAACTTCTCAGCCACGCAGAGGAAGAGTTTGGTTTCCATCATC
TACAGGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTCGATTGCAAGCTGTTACAACTAAATCAAGCTCATGTCCCCAAAGGTCACAGTGC
AATCTATGTTGGAGAAATTCAAAGGAAGCCATTTTGGTTCCATTTCCATTATCATATTTGAATCATCCAACATTTATTTGTTTGATTACGAATGTTGAGGAGTGTAGATA
CAGCCATTGCATGGGTGGTTTGACAGTTCCCAGCAGAGGATTTGCTTTGATCTCACTTCAAGGCTGCACAGTTCTTGAAAGATTATGATCAAGAAGAGAATTCCCTTATC
CTCTCACCCAGTTTTAGTAAGTCAGAGTCGAATATGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHLQGALTIPCKEDAFIDLTSRLQAVTTKSSSCPQRSQC
NLCWRNSKEAILVPFPLSYLNHPTFICLITNVEECRYSHCMGGLTVPSRGFALISLQGCTVLERL