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ClCG11G005167 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G005167
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionF-box domain-containing protein
Genome locationCG_Chr11:5573825..5580252
RNA-Seq ExpressionClCG11G005167
SyntenyClCG11G005167
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039382.1 F-box protein [Cucumis melo var. makuwa]8.3e-1154.41Show/hide
Query:  KMHCLDIDTMRC-VASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK
        K+HC+DID+    VASF F+  DW  I I+NSCNGLL+I KF+  S C GI+N MTN+F + PQP+++
Subjt:  KMHCLDIDTMRC-VASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK

KAE8648955.1 hypothetical protein Csa_007901 [Cucumis sativus]6.5e-1664.86Show/hide
Query:  MHCLDID-TMRCVASFVFDNNDWP-KIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFF-KPPQPKVKKIRIS
        M+C+DI+ T   +ASFVFDNNDWP KI+ILNSCNGLL+I+K  D +FCNGI+N MTN+FF    QPKVK   IS
Subjt:  MHCLDID-TMRCVASFVFDNNDWP-KIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFF-KPPQPKVKKIRIS

KGN52568.1 hypothetical protein Csa_008927 [Cucumis sativus]1.3e-0851.47Show/hide
Query:  KMHCLDID-TMRCVASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK
        K+ C+DID     VASF F+ +DW  I I+NSCNGLL+I KF   S C GI+N MTN+F + P P ++
Subjt:  KMHCLDID-TMRCVASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK

XP_004141602.1 F-box protein At3g07870 [Cucumis sativus]5.9e-1758.24Show/hide
Query:  NINWGPGVPPNV---VKMHCLDID-TMRCVASFVFDNNDWP-KIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFF-KPPQPKVKKIRIS
        N N  P   P      KM+C+DI+ T   +ASFVFDNNDWP KI+ILNSCNGLL+I+K  D +FCNGI+N MTN+FF    QPKVK   IS
Subjt:  NINWGPGVPPNV---VKMHCLDID-TMRCVASFVFDNNDWP-KIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFF-KPPQPKVKKIRIS

XP_008459707.1 PREDICTED: F-box protein At3g07870-like [Cucumis melo]8.3e-1154.41Show/hide
Query:  KMHCLDIDTMRC-VASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK
        K+HC+DID+    VASF F+  DW  I I+NSCNGLL+I KF+  S C GI+N MTN+F + PQP+++
Subjt:  KMHCLDIDTMRC-VASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ2 F-box domain-containing protein2.9e-1758.24Show/hide
Query:  NINWGPGVPPNV---VKMHCLDID-TMRCVASFVFDNNDWP-KIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFF-KPPQPKVKKIRIS
        N N  P   P      KM+C+DI+ T   +ASFVFDNNDWP KI+ILNSCNGLL+I+K  D +FCNGI+N MTN+FF    QPKVK   IS
Subjt:  NINWGPGVPPNV---VKMHCLDID-TMRCVASFVFDNNDWP-KIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFF-KPPQPKVKKIRIS

A0A0A0KSN0 Uncharacterized protein6.4e-0951.47Show/hide
Query:  KMHCLDID-TMRCVASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK
        K+ C+DID     VASF F+ +DW  I I+NSCNGLL+I KF   S C GI+N MTN+F + P P ++
Subjt:  KMHCLDID-TMRCVASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK

A0A0A0KUJ1 FBA_3 domain-containing protein6.0e-0748.44Show/hide
Query:  KMHCLDIDTMRCVASFVF-DNNDWPKIQILNSCNGLLHIYKFSD-GSFCNGIVNLMTNKFFKPP
        K+HC+DIDTM CV SF F D+++   + I++SC+ LL I K  D    C GI+N MTN+F + P
Subjt:  KMHCLDIDTMRCVASFVF-DNNDWPKIQILNSCNGLLHIYKFSD-GSFCNGIVNLMTNKFFKPP

A0A1S3CB99 F-box protein At3g07870-like4.0e-1154.41Show/hide
Query:  KMHCLDIDTMRC-VASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK
        K+HC+DID+    VASF F+  DW  I I+NSCNGLL+I KF+  S C GI+N MTN+F + PQP+++
Subjt:  KMHCLDIDTMRC-VASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK

A0A5A7T7C6 F-box protein4.0e-1154.41Show/hide
Query:  KMHCLDIDTMRC-VASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK
        K+HC+DID+    VASF F+  DW  I I+NSCNGLL+I KF+  S C GI+N MTN+F + PQP+++
Subjt:  KMHCLDIDTMRC-VASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGTTGGAATGTAAAAGGAGGATTATGAATATAAATTGGGGTCCTGGGGTTCCACCCAATGTTGTTAAGATGCATTGTCTTGATATCGATACCATGAGATGCGT
TGCCTCCTTTGTGTTTGACAACAATGATTGGCCTAAAATCCAAATCTTGAATTCCTGCAATGGACTATTGCATATTTACAAATTTAGTGATGGTAGTTTTTGCAACGGCA
TAGTAAACTTGATGACTAACAAGTTTTTCAAACCACCTCAACCTAAAGTAAAAAAAATAAGAATATCCGTGGCACCTACGGATTTGGTTTCAATCCTAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGTTGGAATGTAAAAGGAGGATTATGAATATAAATTGGGGTCCTGGGGTTCCACCCAATGTTGTTAAGATGCATTGTCTTGATATCGATACCATGAGATGCGT
TGCCTCCTTTGTGTTTGACAACAATGATTGGCCTAAAATCCAAATCTTGAATTCCTGCAATGGACTATTGCATATTTACAAATTTAGTGATGGTAGTTTTTGCAACGGCA
TAGTAAACTTGATGACTAACAAGTTTTTCAAACCACCTCAACCTAAAGTAAAAAAAATAAGAATATCCGTGGCACCTACGGATTTGGTTTCAATCCTAAGATAA
Protein sequenceShow/hide protein sequence
MEKLECKRRIMNINWGPGVPPNVVKMHCLDIDTMRCVASFVFDNNDWPKIQILNSCNGLLHIYKFSDGSFCNGIVNLMTNKFFKPPQPKVKKIRISVAPTDLVSILR