; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG11G006380 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G006380
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGATA type zinc finger transcription factor family protein
Genome locationCG_Chr11:6991720..6993716
RNA-Seq ExpressionClCG11G006380
SyntenyClCG11G006380
Gene Ontology termsGO:0051017 - actin filament bundle assembly (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR001781 - Zinc finger, LIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578438.1 LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sororia]2.2e-9171.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSFIGTQQKCK+CEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

XP_004138434.1 LIM domain-containing protein WLIM2b [Cucumis sativus]2.8e-9473.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

XP_022939310.1 LIM domain-containing protein WLIM2b [Cucurbita moschata]1.0e-9171.71Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

XP_023550254.1 LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo]2.2e-9171.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKC+HCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

XP_038884117.1 LIM domain-containing protein WLIM2b [Benincasa hispida]8.2e-9472.91Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKCKACEKTVYPVEQLSADG+SYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

TrEMBL top hitse value%identityAlignment
A0A0A0KAA4 Uncharacterized protein1.4e-9473.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

A0A1S3B3E4 LIM domain-containing protein WLIM2b1.4e-9473.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

A0A6J1FFI9 LIM domain-containing protein WLIM2b4.9e-9271.71Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

A0A6J1JU67 LIM domain-containing protein WLIM2b-like1.6e-9070.92Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNYCSMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEK TPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVE+Q YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIK ASMKR+AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

A0A6J1K140 LIM domain-containing protein WLIM2b4.9e-9271.71Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

SwissProt top hitse value%identityAlignment
O04193 LIM domain-containing protein WLIM2a3.2e-8061.51Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKC+ACEKTVYPVE LSADG+SYHK+CFKCSHCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKS-AEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSH
        QLSNY SMEGV+YC+PHFEQLFKE+G+F KNFQSPAK   +K TPEL        +PS+ AGMFSGTQDKCATC KTVYP+EKVTVESQ YHKSCFKCSH
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKS-AEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSH

Query:  GGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KR+ A    A
Subjt:  GGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

O80839 LIM domain-containing protein PLIM2a4.0e-5947.97Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GT  KCKAC+KTVY ++ L+ +G +YHKSCF+C+HCKGTL                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         +SNY SM+GVLYCKPHFEQLFKE+GN+ KNFQ  A   EK    L        +PSK +  FSGTQDKCATC KTVYPLEKVT+E +SYHK+CF+C+H 
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ++ S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+  R +A
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

Q1ECF5 LIM domain-containing protein PLIM2b2.6e-5845.53Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GT  KC  C+KTVY V+ LS +G+ YHKSCF+C+HCKGTL                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        Q+SNY SM+GVLYCK HFEQLFKE+GNF KNFQ P K+ +   PEL        +PSK + +F GTQDKCA C KTVYPLEK+ +E + +HK+CF+C+HG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ++ S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+ +R+A+
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

Q7F9R9 LIM domain-containing protein PLIM2b3.4e-5848.61Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQ KC AC+KTV+ ++ L+ADGV YHK+CFKCSHCKG L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         + +Y SM+GVLYCK HFEQLFKETG+F K F    +S +K   EL        +PSK    FSGTQDKCA C KTVYPLEK+T+E +SYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASMKRSAAPVPE
        GC ++ S+YAAL G+LYCK HF QLF EKGSYNH+  KS S +     VPE
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASMKRSAAPVPE

Q9M047 LIM domain-containing protein WLIM2b4.4e-8263.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

Arabidopsis top hitse value%identityAlignment
AT3G55770.1 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

AT3G55770.2 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

AT3G55770.3 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

AT3G55770.4 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

AT3G55770.5 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATG
CAGCCACTGCAAAGGGACTCTAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTACATGTATTCTTAATAACGCTTTCTTTTTGTTATACGGGGAATCTAAGCATC
TTGCCAAACTATTTTCTAAAGGATATCCAAATGTGATATCAACTTCTGCCTCCAGTATCCATCTGTTGATGTATCTATCACAACTGAGCAATTATTGTTCAATGGAAGGT
GTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGT
AATTTCCTGTTGTAATCAATTGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAA
CAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACAC
CACTTCTCCCAACTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCTGTTCCCGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATG
CAGCCACTGCAAAGGGACTCTAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTACATGTATTCTTAATAACGCTTTCTTTTTGTTATACGGGGAATCTAAGCATC
TTGCCAAACTATTTTCTAAAGGATATCCAAATGTGATATCAACTTCTGCCTCCAGTATCCATCTGTTGATGTATCTATCACAACTGAGCAATTATTGTTCAATGGAAGGT
GTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGT
AATTTCCTGTTGTAATCAATTGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAA
CAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACAC
CACTTCTCCCAACTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCTGTTCCCGAAGCTTAAAGTTCTAATTCTCG
TATCATTATTCACGGTTTCGGACATGACTCTCTATTTACATGAATGTGTTTTAACTTAAAAATTTATGTTTTCGAGATGGAAAAAAGGGTAAAGGAAAAATATATATGTT
ACCATCATTTCGGCTCGTGTGTTTATTTGGGCAAACTGTTGAATTTGATCGATATTTGAGATGCAAACCTTATTTATTGTTTCCAGGACTTGCATATTGCATATTTTGAG
CATTATGCATTGTGTTTTCGTGCATAACAAAAACATTTATGGAGAGAATGGGAACAGAAAGCTGCAGATTGAATACCAAAAAATAAAAGATTAAGGGTAGAGGAAAGAGA
GACATTTCTCTTCTAATTGACACCAATAAGGTGGGAGAAACATATTCTGGAATGATGATTTTGCAATGTGATGTTATTATGATTT
Protein sequenceShow/hide protein sequence
MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEG
VLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKH
HFSQLFKEKGSYNHLIKSASMKRSAAPVPEA