CuGenDBv2

Gene ID	ClCG11G007145
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein Ycf2
Genome location	CG_Chr11:7947670..7948312
RNA-Seq Expression	ClCG11G007145
Synteny	ClCG11G007145
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QIT04093.1 Ycf2 protein [Luffa aegyptiaca]

1.3e-39

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

QJR53001.1 hypothetical protein RF2 [Herpetospermum pedunculosum]

1.3e-39

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

YP_009751696.1 Ycf2 protein [Hodgsonia heteroclita]

1.3e-39

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

YP_009752370.1 Ycf2 protein [Bryonia marmorata]

1.3e-39

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]

1.3e-39

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

TrEMBL top hits

e value

%identity

Alignment

A0A343F2F1 Protein Ycf2

6.2e-40

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

A0A6H0ESM3 Protein Ycf2

6.2e-40

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

A0A6H0ET42 Protein Ycf2

6.2e-40

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

A0A6H0EV63 Protein Ycf2

6.2e-40

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

A0A6M3RUH1 Protein Ycf2

6.2e-40

90.32

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

SwissProt top hits

e value

%identity

Alignment

B1A978 Protein Ycf2

9.2e-41

88.17

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKRWFIKNTQEKHF LLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

Q09MB4 Protein Ycf2

2.3e-39

86.02

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QP VSVFSHREFFADEEMSKGLLTSQ D PTSIYKRWFIKNTQEKHF LLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

Q09WV7 Protein Ycf2

1.7e-39

86.02

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEK+F LLI+RQRWLRTNSSLSNGFFRSNTPSESYQYLS L   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

Q0ZIV6 Protein Ycf2

7.8e-40

87.1

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKRWFIKNTQEKHF LLIHRQRWLRTNSSLSNG FRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

Q49KT6 Protein Ycf2

7.1e-41

88.17

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKRWFIKNTQEKHF LLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

6.1e-40

86.02

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKRWFIKNTQEKHF LLI RQRWLRTNSSLSNGFFRSNT SESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

6.1e-40

86.02

Show/hide

Query:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN
        + +  +QPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKRWFIKNTQEKHF LLI RQRWLRTNSSLSNGFFRSNT SESYQYLSNL   N
Subjt:  YIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGCAATCCTAAGCCAAATCCTTTTTCCGAAAACAAAAAAAGGGTAGGTGCAGAGACTCAATGGAAGCAAAATGTAACTATCAATAGAGATTTGAGCCCGAAGATAAC
TGTCAATGCAACTATTAATGTGATTATTCCAACTATATTTAGTATCATACATGTAACGATCATAGTGGGAATCATCACTCTTAGATACATTATTTTGATAAATCAGCCTT
TTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAAGAGATGTCAAAGGGGCTGCTTACTTCCCAAACAGATCTTCCTACATCTATATATAAACGCTGGTTTATC
AAGAATACGCAAGAAAAGCACTTCGGATTGTTGATTCATCGCCAGAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTCCGTTCTAATACTCCATCCGAGAG
TTATCAGTATTTATCAAATCTACTGCCTCAGAATTTCCTCCCCTTTTGA

mRNA sequence

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Protein sequence

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MGNPKPNPFSENKKRVGAETQWKQNVTINRDLSPKITVNATINVIIPTIFSIIHVTIIVGIITLRYIILINQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFI
KNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESYQYLSNLLPQNFLPF

ClCG11G007145 (gene) of Watermelon (Charleston Gray) v2.5 genome