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ClCG11G007190 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G007190
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description60s ribosomal protein l2
Genome locationCG_Chr11:7973677..7973995
RNA-Seq ExpressionClCG11G007190
SyntenyClCG11G007190
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032895.1 60s ribosomal protein l2 [Cucumis melo var. makuwa]9.5e-4296.47Show/hide
Query:  MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        MRVSNPAAEMSSGFLGVDEWPATF LRDP TIGADHTRCYRGSKRGQAVTIER SLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
Subjt:  MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN

KAA0051145.1 ribosomal protein L2 [Cucumis melo var. makuwa]1.7e-1976.67Show/hide
Query:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        L +  TIG DHTRCY GSKRGQ +TIER SLSIPSHTGR+VKWQGH PVWL+AEYS H N
Subjt:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN

KAF3632620.1 60S ribosomal protein L2, mitochondrial [Capsicum annuum]1.7e-1491.11Show/hide
Query:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQG
        LR  NTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTG+E KWQG
Subjt:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQG

THU42354.1 hypothetical protein C4D60_Mb00t00470 [Musa balbisiana]1.1e-2487.88Show/hide
Query:  MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREV
        MRVSNPAAEMSSGF G+DEWPAT  LR PNTIGADHTR YRGSKRGQAVTI+RLSLSIPSHTGRE+
Subjt:  MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREV

YP_009242031.1 ribosomal protein L2 [Oryza minuta]3.4e-1587.5Show/hide
Query:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTP
        LR PNTIGADHTRCYRGSKRG A TIERLSLSIPSHTGREVKWQ   P
Subjt:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTP

TrEMBL top hitse value%identityAlignment
A0A142D7X8 Ribosomal protein L21.7e-1587.5Show/hide
Query:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTP
        LR PNTIGADHTRCYRGSKRG A TIERLSLSIPSHTGREVKWQ   P
Subjt:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTP

A0A2G2YYL5 60S ribosomal protein L2, mitochondrial3.1e-1488.89Show/hide
Query:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQG
        LR  NTIGADHTRCY GSKRGQAVTIERLSLSIPSHTG+E KWQG
Subjt:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQG

A0A4S8I504 Uncharacterized protein5.1e-2587.88Show/hide
Query:  MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREV
        MRVSNPAAEMSSGF G+DEWPAT  LR PNTIGADHTR YRGSKRGQAVTI+RLSLSIPSHTGRE+
Subjt:  MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREV

A0A5A7SUL2 60s ribosomal protein l24.6e-4296.47Show/hide
Query:  MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        MRVSNPAAEMSSGFLGVDEWPATF LRDP TIGADHTRCYRGSKRGQAVTIER SLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
Subjt:  MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN

A0A5D3BXG0 Ribosomal protein L2 (Mitochondrion)8.5e-2076.67Show/hide
Query:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        L +  TIG DHTRCY GSKRGQ +TIER SLSIPSHTGR+VKWQGH PVWL+AEYS H N
Subjt:  LRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGTATCCAATCCCGCCGCTGAGATGTCAAGCGGATTCCTGGGCGTTGACGAATGGCCGGCCACCTTTTACCTTCGTGACCCGAACACGATTGGTGCTGACCACAC
TAGGTGCTACCGTGGTAGCAAGAGAGGCCAGGCGGTGACAATTGAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCG
TTTGGCTCCTCGCGGAGTATAGCTCACATCCAAACATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGGTATCCAATCCCGCCGCTGAGATGTCAAGCGGATTCCTGGGCGTTGACGAATGGCCGGCCACCTTTTACCTTCGTGACCCGAACACGATTGGTGCTGACCACAC
TAGGTGCTACCGTGGTAGCAAGAGAGGCCAGGCGGTGACAATTGAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCG
TTTGGCTCCTCGCGGAGTATAGCTCACATCCAAACATCTGA
Protein sequenceShow/hide protein sequence
MRVSNPAAEMSSGFLGVDEWPATFYLRDPNTIGADHTRCYRGSKRGQAVTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPNI