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ClCG11G008540 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G008540
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionJHL25P11.1 protein
Genome locationCG_Chr11:12382664..12383131
RNA-Seq ExpressionClCG11G008540
SyntenyClCG11G008540
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602743.1 hypothetical protein SDJN03_07976, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4772.06Show/hide
Query:  AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPPLPEQIGGDSGEEIGLLQRYLDDQ
        AAAS WL S    SRSRF  LL+CSPL +PIFCATFP I AI+LCIRLARHR RI L DSPE ERL+ CEEGGCR  LPE++G D  E+IGLLQRYLDDQ
Subjt:  AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPPLPEQIGGDSGEEIGLLQRYLDDQ

Query:  LLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG
        LLLVRSVYEC DC+D L+GD  FC+++NSNL PLLG
Subjt:  LLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG

XP_022152501.1 uncharacterized protein LOC111020213 [Momordica charantia]2.1e-4767.92Show/hide
Query:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP
        M SI  LS F  +PP+IML    AAASSWL S    SR+RF+F+L+CSPL +PIFCATFPFI AI+LCIRLARHRR I L DSPEIERL+ CEEGGC   
Subjt:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP

Query:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG
        LPE    D  EEIGLLQRYLDDQLLLVRSVYEC D  + +NGD  FC+ KNSN+ PLLG
Subjt:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG

XP_022962190.1 uncharacterized protein LOC111462719 [Cucurbita moschata]2.6e-5068.55Show/hide
Query:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP
        MSSIP L     + P+IML    AAAS WL S    SRSRF  LL+CSPL +PIFCATFP I AI+LCIRLARHR RI L DSPE ERL+ CEEGGCR  
Subjt:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP

Query:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG
        LPE++G D  E+IGLLQRYLDDQLLLVRSVYEC DC+D L+GD  FC+I+NSNL PLLG
Subjt:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG

XP_022990172.1 uncharacterized protein LOC111487144 [Cucurbita maxima]3.2e-4866.67Show/hide
Query:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP
        MSSIP L     + P+IML    AAAS WL      SRSRF  LL+CSPL +PIFCATFP I AI+LCIRLARHR RI L DSPE ERL+ CEEGGCR  
Subjt:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP

Query:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG
        LPE++G D  E+IGLL RYLDDQLLLVRSVY C DC+D L+GD  FC+I+NSNL PLLG
Subjt:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG

XP_023550754.1 uncharacterized protein LOC111808798 [Cucurbita pepo subsp. pepo]2.9e-4967.92Show/hide
Query:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP
        MSSIP L     +  +IML    AAAS WL S    SRSRF  LL+CSPL +PIFCATFP I AI+LCIRLARHR RI L DSPE ERL+ CEEGGCR  
Subjt:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP

Query:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG
        LPE++G D  E+IGLLQRYLDDQLLLVRSVYEC DC+D L+GD  FC+I+NSNL PLLG
Subjt:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG

TrEMBL top hitse value%identityAlignment
A0A6J1DHX6 uncharacterized protein LOC1110202131.0e-4767.92Show/hide
Query:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP
        M SI  LS F  +PP+IML    AAASSWL S    SR+RF+F+L+CSPL +PIFCATFPFI AI+LCIRLARHRR I L DSPEIERL+ CEEGGC   
Subjt:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP

Query:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG
        LPE    D  EEIGLLQRYLDDQLLLVRSVYEC D  + +NGD  FC+ KNSN+ PLLG
Subjt:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG

A0A6J1HEC7 uncharacterized protein LOC1114627191.3e-5068.55Show/hide
Query:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP
        MSSIP L     + P+IML    AAAS WL S    SRSRF  LL+CSPL +PIFCATFP I AI+LCIRLARHR RI L DSPE ERL+ CEEGGCR  
Subjt:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP

Query:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG
        LPE++G D  E+IGLLQRYLDDQLLLVRSVYEC DC+D L+GD  FC+I+NSNL PLLG
Subjt:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG

A0A6J1JHX7 uncharacterized protein LOC1114871441.6e-4866.67Show/hide
Query:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP
        MSSIP L     + P+IML    AAAS WL      SRSRF  LL+CSPL +PIFCATFP I AI+LCIRLARHR RI L DSPE ERL+ CEEGGCR  
Subjt:  MSSIPYLSFFPTDPPLIML----AAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPP

Query:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG
        LPE++G D  E+IGLL RYLDDQLLLVRSVY C DC+D L+GD  FC+I+NSNL PLLG
Subjt:  LPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG

A0A6J5WCG8 Uncharacterized protein1.1e-2257.14Show/hide
Query:  PLIMLAAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPE--IERLQECEEGGCRPPLPEQIGGDSGEEIGLL
        PLIMLAAASS     R+R RSR+LFLL+CSP+ IP  CATFPF+ A +LC+RL R RR    H + E   ERL+ CEEG           G   EE+GLL
Subjt:  PLIMLAAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPE--IERLQECEEGGCRPPLPEQIGGDSGEEIGLL

Query:  QRYLDDQLLLVRSVYECAD
        QRYL+DQLLLV SVY+C D
Subjt:  QRYLDDQLLLVRSVYECAD

M5XT02 Uncharacterized protein1.1e-2257.14Show/hide
Query:  PLIMLAAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPE--IERLQECEEGGCRPPLPEQIGGDSGEEIGLL
        PLIMLAAASS     R+R RSR+LFLL+CSP+ IP  CATFPF+ A +LC+RL R RR    H + E   ERL+ CEEG           G   EE+GLL
Subjt:  PLIMLAAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPE--IERLQECEEGGCRPPLPEQIGGDSGEEIGLL

Query:  QRYLDDQLLLVRSVYECAD
        QRYL+DQLLLV SVY+C D
Subjt:  QRYLDDQLLLVRSVYECAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G35430.1 unknown protein1.4e-1750.5Show/hide
Query:  RSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIE--RLQECEEG-GCRPPLPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECA
        RSRF+F L+CSPL IPI CA+ P + A+++  RL R R   +   + E +  RL+ CEEG GC        G D  EE GLLQRYL+DQL+LVRSVY+C 
Subjt:  RSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIE--RLQECEEG-GCRPPLPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECA

Query:  D
        +
Subjt:  D

AT4G09170.1 unknown protein5.9e-0833.58Show/hide
Query:  IMLAAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRR--------IYLHDSPEIERLQECEEGGCRPPLPEQIGGDSGEE
        +ML  AS +     S   SR +FL++CSPL     C + P + A+++  RL     +          L D  +  RL++CEEG     + E+   D  EE
Subjt:  IMLAAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRR--------IYLHDSPEIERLQECEEGGCRPPLPEQIGGDSGEE

Query:  IGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPF
         GLL RYLD+QL L R++++     DH +   PF
Subjt:  IGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGATCCCCTACCTCTCCTTCTTCCCCACAGATCCGCCGCTCATCATGTTAGCCGCCGCCTCTTCCTGGCTTCATTCCAGCCGGAGCCGGAGCCGTAGCCGCTT
TCTCTTTCTCTTGGTTTGTTCCCCTCTCTTCATTCCCATTTTCTGCGCTACTTTCCCCTTCATCTTTGCCATAGATCTCTGCATCCGCCTTGCTCGTCACAGGAGAAGGA
TATATCTTCACGATTCACCAGAAATCGAACGCTTGCAGGAATGTGAGGAAGGCGGCTGCAGACCACCGCTTCCGGAGCAGATTGGCGGTGACAGTGGGGAGGAGATCGGC
TTATTACAGAGGTACTTGGATGATCAGCTACTGCTCGTTCGTTCTGTTTATGAATGTGCTGATTGTAGCGACCACTTAAATGGGGATCCTCCATTTTGTAACATTAAAAA
TAGTAATTTGACTCCACTATTAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCGATCCCCTACCTCTCCTTCTTCCCCACAGATCCGCCGCTCATCATGTTAGCCGCCGCCTCTTCCTGGCTTCATTCCAGCCGGAGCCGGAGCCGTAGCCGCTT
TCTCTTTCTCTTGGTTTGTTCCCCTCTCTTCATTCCCATTTTCTGCGCTACTTTCCCCTTCATCTTTGCCATAGATCTCTGCATCCGCCTTGCTCGTCACAGGAGAAGGA
TATATCTTCACGATTCACCAGAAATCGAACGCTTGCAGGAATGTGAGGAAGGCGGCTGCAGACCACCGCTTCCGGAGCAGATTGGCGGTGACAGTGGGGAGGAGATCGGC
TTATTACAGAGGTACTTGGATGATCAGCTACTGCTCGTTCGTTCTGTTTATGAATGTGCTGATTGTAGCGACCACTTAAATGGGGATCCTCCATTTTGTAACATTAAAAA
TAGTAATTTGACTCCACTATTAGGTTGA
Protein sequenceShow/hide protein sequence
MSSIPYLSFFPTDPPLIMLAAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPPLPEQIGGDSGEEIG
LLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG