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ClCG11G009941 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G009941
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationCG_Chr11:16844884..16846072
RNA-Seq ExpressionClCG11G009941
SyntenyClCG11G009941
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154963.1 uncharacterized protein LOC111022107 [Momordica charantia]1.0e-1841.22Show/hide
Query:  NYGEEMLDREHTVSGLLIIMYMKSQTTTWRRG--RGCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLE
        +Y EEM+      +   I+M +       R G   G   L ++TCTC+EFDY+++PCSHAIA  + R I+PYT    AY + +   G AEPIFPV     
Subjt:  NYGEEMLDREHTVSGLLIIMYMKSQTTTWRRG--RGCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLE

Query:  WKRSDAFVDIEILPPTRVPQVGRWQEIKTPF
        WK S  FV+I++ PP +V +VGR Q ++ P+
Subjt:  WKRSDAFVDIEILPPTRVPQVGRWQEIKTPF

XP_022157996.1 uncharacterized protein LOC111024593 [Momordica charantia]1.2e-1929.1Show/hide
Query:  MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQY------------------------------------------------DET
        +VRGR E+SY HLHAY+EA +I NP  +F ++ +    F Y+FMALG                                                  +E+
Subjt:  MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQY------------------------------------------------DET

Query:  DDAWTWFFAMVKLVISAVSEFVIVW-QFSSNYAFELCGKNY--------------------GEEMLDREHTVSGLLIIM-------YMKSQTTTWRRGRG
        D +W WF   +K +I    E V +  +  + Y +      Y                    G E   R + V      M       + KS   T +    
Subjt:  DDAWTWFFAMVKLVISAVSEFVIVW-QFSSNYAFELCGKNY--------------------GEEMLDREHTVSGLLIIM-------YMKSQTTTWRRGRG

Query:  C-------GL-----LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGR
        C       GL     L+A+TCTC EF Y  IPCSHAIAV  ++ I+ +T     Y + ++ G YAEPI PV  + EWKR   +  I I PP  V   GR
Subjt:  C-------GL-----LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGR

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]1.0e-1825.27Show/hide
Query:  MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQY------------------------------------------------DET
        ++RG    SY  L AY EA +I+NPG +F+LKL+ GKYF YVFM LGQ                                                  ET
Subjt:  MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQY------------------------------------------------DET

Query:  DDAWTWFFAMVKLVISAVSEFVIVWQ------------FSSNY-------------------------AFELCGKNYGEEMLDR----------------
          +W WF   +K  ++ V   V V              FS  +                          F    K Y E   +                 
Subjt:  DDAWTWFFAMVKLVISAVSEFVIVWQ------------FSSNY-------------------------AFELCGKNYGEEMLDR----------------

Query:  EHT--VSGLLIIMYMKSQTTTW---------------------------------------------RRGRGCGL--LHAKTCTCKEFDYYEIPCSHAIA
         HT  +    ++ +++ +  TW                                             R G   G+  L+A  C+C+EFDY++IPCSHAIA
Subjt:  EHT--VSGLLIIMYMKSQTTTW---------------------------------------------RRGRGCGL--LHAKTCTCKEFDYYEIPCSHAIA

Query:  VTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTP
            R I+PY+    AY   +    YAEPIFPV  +  W  S  FV+I + PP  VP+VGR + ++ P
Subjt:  VTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTP

XP_038889288.1 uncharacterized protein LOC120079194 [Benincasa hispida]6.1e-2457.73Show/hide
Query:  GCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTPFV
        G  +L+  TCTCK+F+YY++PCSH IA T YR IDPYT  SL Y+IQ +YG YA+PIF V P+LEW R D + DI+ILPP  V QVG   EI+ P +
Subjt:  GCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTPFV

XP_038904344.1 uncharacterized protein LOC120090698 [Benincasa hispida]3.8e-1856.63Show/hide
Query:  LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVG
        L+A+ C+CK+FDYY++PCSHAIA   YR IDP T  S  Y+IQ IYG Y EPIFP+  + E  + D + DI+IL P RV QVG
Subjt:  LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVG

TrEMBL top hitse value%identityAlignment
A0A6J1DLQ2 uncharacterized protein LOC1110221074.8e-1941.22Show/hide
Query:  NYGEEMLDREHTVSGLLIIMYMKSQTTTWRRG--RGCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLE
        +Y EEM+      +   I+M +       R G   G   L ++TCTC+EFDY+++PCSHAIA  + R I+PYT    AY + +   G AEPIFPV     
Subjt:  NYGEEMLDREHTVSGLLIIMYMKSQTTTWRRG--RGCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLE

Query:  WKRSDAFVDIEILPPTRVPQVGRWQEIKTPF
        WK S  FV+I++ PP +V +VGR Q ++ P+
Subjt:  WKRSDAFVDIEILPPTRVPQVGRWQEIKTPF

A0A6J1DNT3 protein FAR1-RELATED SEQUENCE 4-like7.7e-1736.97Show/hide
Query:  WFFAMVKLVISAVSEFVIVWQFSSNYAFELCGK---------NYGEEMLDREHTVSGLLIIMYMKSQTTTWRRG--RGCGLLHAKTCTCKEFDYYEIPCS
        WF+    L  S  S         S+YA E+  +         +Y EEM+      +   I+M +       R G   G   L ++TCTC+EFDY+++PCS
Subjt:  WFFAMVKLVISAVSEFVIVWQFSSNYAFELCGK---------NYGEEMLDREHTVSGLLIIMYMKSQTTTWRRG--RGCGLLHAKTCTCKEFDYYEIPCS

Query:  HAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGR
        HAIA    R I+PYT    AY + +    YAEPIFPV     WK S  FV+I++ PP +V +VGR
Subjt:  HAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGR

A0A6J1DP73 uncharacterized protein LOC1110225363.5e-1748.35Show/hide
Query:  LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTP
        L+A+TC CKEFDY+++PCSHAIA   YR ++ YT  S AY +QT+   Y EP +P     +W   D FVD  + PP  VP+VGR Q ++ P
Subjt:  LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTP

A0A6J1DYC4 uncharacterized protein LOC1110256784.8e-1925.27Show/hide
Query:  MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQY------------------------------------------------DET
        ++RG    SY  L AY EA +I+NPG +F+LKL+ GKYF YVFM LGQ                                                  ET
Subjt:  MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQY------------------------------------------------DET

Query:  DDAWTWFFAMVKLVISAVSEFVIVWQ------------FSSNY-------------------------AFELCGKNYGEEMLDR----------------
          +W WF   +K  ++ V   V V              FS  +                          F    K Y E   +                 
Subjt:  DDAWTWFFAMVKLVISAVSEFVIVWQ------------FSSNY-------------------------AFELCGKNYGEEMLDR----------------

Query:  EHT--VSGLLIIMYMKSQTTTW---------------------------------------------RRGRGCGL--LHAKTCTCKEFDYYEIPCSHAIA
         HT  +    ++ +++ +  TW                                             R G   G+  L+A  C+C+EFDY++IPCSHAIA
Subjt:  EHT--VSGLLIIMYMKSQTTTW---------------------------------------------RRGRGCGL--LHAKTCTCKEFDYYEIPCSHAIA

Query:  VTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTP
            R I+PY+    AY   +    YAEPIFPV  +  W  S  FV+I + PP  VP+VGR + ++ P
Subjt:  VTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTP

A0A6J1DZQ9 uncharacterized protein LOC1110245935.7e-2029.1Show/hide
Query:  MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQY------------------------------------------------DET
        +VRGR E+SY HLHAY+EA +I NP  +F ++ +    F Y+FMALG                                                  +E+
Subjt:  MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQY------------------------------------------------DET

Query:  DDAWTWFFAMVKLVISAVSEFVIVW-QFSSNYAFELCGKNY--------------------GEEMLDREHTVSGLLIIM-------YMKSQTTTWRRGRG
        D +W WF   +K +I    E V +  +  + Y +      Y                    G E   R + V      M       + KS   T +    
Subjt:  DDAWTWFFAMVKLVISAVSEFVIVW-QFSSNYAFELCGKNY--------------------GEEMLDREHTVSGLLIIM-------YMKSQTTTWRRGRG

Query:  C-------GL-----LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGR
        C       GL     L+A+TCTC EF Y  IPCSHAIAV  ++ I+ +T     Y + ++ G YAEPI PV  + EWKR   +  I I PP  V   GR
Subjt:  C-------GL-----LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64255.1 MuDR family transposase9.7e-0423.91Show/hide
Query:  FSSNYAFELCGKNYGEEMLDR-EHTVSGLLIIMYMKSQ--------TTTWRRGRGCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHI
        FS + +   CG  Y E ++D+ E   +  +   Y+ +          T   +G     L   +CTC +F  Y+ PC HA+AV      +P  +    Y +
Subjt:  FSSNYAFELCGKNYGEEMLDR-EHTVSGLLIIMYMKSQ--------TTTWRRGRGCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHI

Query:  QTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVP
        + +   YA     V  +  W  +       +LPP   P
Subjt:  QTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVP

AT1G64260.1 MuDR family transposase3.0e-0533.87Show/hide
Query:  LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEW
        L+  TCTC++F  Y+ PC HA+AV     I+P  +    Y ++     YA    PV  +  W
Subjt:  LHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGAGGTAGACTAGAGGAGTCGTATAGCCATTTACATGCCTATAGTGAAGCCCAGCAGATTGTGAACCCTGGAATTGTGTTTGACTTGAAGCTTGATGATGGGAA
ATACTTCAGCTATGTCTTCATGGCCCTTGGCCAATACGATGAGACAGATGATGCATGGACATGGTTCTTTGCGATGGTGAAACTTGTCATCAGTGCGGTATCAGAATTTG
TCATAGTATGGCAATTCTCGTCAAACTATGCTTTTGAATTATGTGGAAAAAATTATGGCGAGGAGATGTTAGATCGAGAACACACGGTATCCGGCCTATTGATCATCATG
TATATGAAGTCACAAACAACCACTTGGAGGCGAGGGAGGGGTTGTGGACTTTTGCATGCAAAAACATGCACTTGCAAGGAGTTTGATTATTATGAGATTCCTTGCTCCCA
TGCGATTGCGGTCACACATTATCGGATCATTGATCCATACACCTTCTATTCTCTGGCATATCACATACAAACTATTTATGGGGGATATGCAGAACCAATTTTCCCGGTAA
GACCTTTGTTAGAGTGGAAGAGGTCAGATGCTTTTGTAGACATTGAGATCCTCCCACCAACGAGGGTTCCTCAAGTTGGTCGATGGCAAGAAATCAAGACACCATTTGTT
AGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGAGGTAGACTAGAGGAGTCGTATAGCCATTTACATGCCTATAGTGAAGCCCAGCAGATTGTGAACCCTGGAATTGTGTTTGACTTGAAGCTTGATGATGGGAA
ATACTTCAGCTATGTCTTCATGGCCCTTGGCCAATACGATGAGACAGATGATGCATGGACATGGTTCTTTGCGATGGTGAAACTTGTCATCAGTGCGGTATCAGAATTTG
TCATAGTATGGCAATTCTCGTCAAACTATGCTTTTGAATTATGTGGAAAAAATTATGGCGAGGAGATGTTAGATCGAGAACACACGGTATCCGGCCTATTGATCATCATG
TATATGAAGTCACAAACAACCACTTGGAGGCGAGGGAGGGGTTGTGGACTTTTGCATGCAAAAACATGCACTTGCAAGGAGTTTGATTATTATGAGATTCCTTGCTCCCA
TGCGATTGCGGTCACACATTATCGGATCATTGATCCATACACCTTCTATTCTCTGGCATATCACATACAAACTATTTATGGGGGATATGCAGAACCAATTTTCCCGGTAA
GACCTTTGTTAGAGTGGAAGAGGTCAGATGCTTTTGTAGACATTGAGATCCTCCCACCAACGAGGGTTCCTCAAGTTGGTCGATGGCAAGAAATCAAGACACCATTTGTT
AGGTGA
Protein sequenceShow/hide protein sequence
MVRGRLEESYSHLHAYSEAQQIVNPGIVFDLKLDDGKYFSYVFMALGQYDETDDAWTWFFAMVKLVISAVSEFVIVWQFSSNYAFELCGKNYGEEMLDREHTVSGLLIIM
YMKSQTTTWRRGRGCGLLHAKTCTCKEFDYYEIPCSHAIAVTHYRIIDPYTFYSLAYHIQTIYGGYAEPIFPVRPLLEWKRSDAFVDIEILPPTRVPQVGRWQEIKTPFV
R