; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG11G009943 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G009943
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr11:16888472..16889632
RNA-Seq ExpressionClCG11G009943
SyntenyClCG11G009943
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]3.5e-1961.9Show/hide
Query:  MEDAIRVLAKPGAKWDVSPTSIKTLSASSLRPEANLWVYLVKKRQIPTTHDKTVSRDRVMAAYCIMRRITLDVGRIIAAQIRGV
        MEDA++VL + G KW VS   + TL++ SL  E  LWVYLVKKR I TTHDKTVSRDRVMA YCI+R I +DVG++IA Q+R +
Subjt:  MEDAIRVLAKPGAKWDVSPTSIKTLSASSLRPEANLWVYLVKKRQIPTTHDKTVSRDRVMAAYCIMRRITLDVGRIIAAQIRGV
XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]2.4e-2059.14Show/hide
Query:  ELMEDAIRVLAKPGAKWDVSPTSIKTLSASSLRPEANLWVYLVKKRQIPTTHDKTVSRDRVMAAYCIMRRITLDVGRIIAAQIRGVFNKPRGQ
        E MEDA+R L + G +W VS   IKTL++S L PEA LWVYLVK+R IPT+HDKTVSRDRVMAAYCI   I +DV  +IAAQ +    + + Q
Subjt:  ELMEDAIRVLAKPGAKWDVSPTSIKTLSASSLRPEANLWVYLVKKRQIPTTHDKTVSRDRVMAAYCIMRRITLDVGRIIAAQIRGVFNKPRGQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTAATGGAGGACGCAATCCGGGTATTGGCGAAGCCAGGGGCCAAGTGGGATGTTTCACCCACAAGTATAAAAACGCTATCAGCTAGCAGCCTAAGACCAGAGGC
AAACCTGTGGGTGTACTTGGTGAAGAAGCGACAGATCCCTACAACGCATGACAAGACAGTGTCAAGGGATCGGGTAATGGCAGCATATTGCATTATGCGTCGCATCACCC
TTGATGTTGGACGCATAATTGCGGCGCAGATAAGAGGGGTGTTCAACAAGCCAAGGGGTCAACTCTTTTTCCCCACTCTTATCATGAACTTATACGCCAATGCTTCCATC
GGAGGCCCAACGGAAGTGTTAGACGCAGAGAAGATGATTGAAGTTAGTGGCGTAATCGCCCACAAGACTCTGCGTTGGTTGATGAGAGGATCACAACATCTGCCAGAGCC
TGCCAAGGCCACCAAAAGACCTCATCAACCCATTCTGCCTCCAAAGCCGCAACCGCAGAAGAAGGGGAAGCCGTCCAAGTTGAAGGCCGTGGCAAATCCTGATGCCACCA
TTAGACCTTCCCCAACCTCAAGCCCTTCACCACCACTTCCAACAACCAGAAGGGAACCAACTCCAACTCCACCTCCTCCTAAGACGCATCGCCCTAAGCCACCTCCACCT
TCTCATAAAACGCATCGCCCCAAACATCCAAAACCTCGACCTTCCACAAAACCCTCCGCCCCAATACGAGTTGATGACTCACACTTTGGGGATCTTGGCGCGACTGTTAT
GCGTCCATTATCCCCTGCATTTGACGAAACTCCATCCACTCCCCCACCTCAACCAAACCCGTCTACTCCACCTCAGCCAAACTCGCCTACCCCACCAACGCAACCACAAC
TGCAAGAAGGCCAACTTGACCTCGAGTGGGAGACAGTGCAAACGTATCTGCAGCAATCGATCTTGCGTCCTGTGATGCACTCATTAAATATGTTAGCACACAGGCAGATG
GAGCAGTTCCAATTCACATTAAATTACGTTCATCAAATGCTCTCTATCCGACCGGAAATCCCGCCCCCTGATATTCCAGAACGCCTCCAACAGCCCCTTGTCTTTCCAGT
ACCGCAGCGCCCTGCACCTGAGCAGCAACGCAGACCTAATGAAGACGAGACTGATGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTAATGGAGGACGCAATCCGGGTATTGGCGAAGCCAGGGGCCAAGTGGGATGTTTCACCCACAAGTATAAAAACGCTATCAGCTAGCAGCCTAAGACCAGAGGC
AAACCTGTGGGTGTACTTGGTGAAGAAGCGACAGATCCCTACAACGCATGACAAGACAGTGTCAAGGGATCGGGTAATGGCAGCATATTGCATTATGCGTCGCATCACCC
TTGATGTTGGACGCATAATTGCGGCGCAGATAAGAGGGGTGTTCAACAAGCCAAGGGGTCAACTCTTTTTCCCCACTCTTATCATGAACTTATACGCCAATGCTTCCATC
GGAGGCCCAACGGAAGTGTTAGACGCAGAGAAGATGATTGAAGTTAGTGGCGTAATCGCCCACAAGACTCTGCGTTGGTTGATGAGAGGATCACAACATCTGCCAGAGCC
TGCCAAGGCCACCAAAAGACCTCATCAACCCATTCTGCCTCCAAAGCCGCAACCGCAGAAGAAGGGGAAGCCGTCCAAGTTGAAGGCCGTGGCAAATCCTGATGCCACCA
TTAGACCTTCCCCAACCTCAAGCCCTTCACCACCACTTCCAACAACCAGAAGGGAACCAACTCCAACTCCACCTCCTCCTAAGACGCATCGCCCTAAGCCACCTCCACCT
TCTCATAAAACGCATCGCCCCAAACATCCAAAACCTCGACCTTCCACAAAACCCTCCGCCCCAATACGAGTTGATGACTCACACTTTGGGGATCTTGGCGCGACTGTTAT
GCGTCCATTATCCCCTGCATTTGACGAAACTCCATCCACTCCCCCACCTCAACCAAACCCGTCTACTCCACCTCAGCCAAACTCGCCTACCCCACCAACGCAACCACAAC
TGCAAGAAGGCCAACTTGACCTCGAGTGGGAGACAGTGCAAACGTATCTGCAGCAATCGATCTTGCGTCCTGTGATGCACTCATTAAATATGTTAGCACACAGGCAGATG
GAGCAGTTCCAATTCACATTAAATTACGTTCATCAAATGCTCTCTATCCGACCGGAAATCCCGCCCCCTGATATTCCAGAACGCCTCCAACAGCCCCTTGTCTTTCCAGT
ACCGCAGCGCCCTGCACCTGAGCAGCAACGCAGACCTAATGAAGACGAGACTGATGGTTAA
Protein sequenceShow/hide protein sequence
MELMEDAIRVLAKPGAKWDVSPTSIKTLSASSLRPEANLWVYLVKKRQIPTTHDKTVSRDRVMAAYCIMRRITLDVGRIIAAQIRGVFNKPRGQLFFPTLIMNLYANASI
GGPTEVLDAEKMIEVSGVIAHKTLRWLMRGSQHLPEPAKATKRPHQPILPPKPQPQKKGKPSKLKAVANPDATIRPSPTSSPSPPLPTTRREPTPTPPPPKTHRPKPPPP
SHKTHRPKHPKPRPSTKPSAPIRVDDSHFGDLGATVMRPLSPAFDETPSTPPPQPNPSTPPQPNSPTPPTQPQLQEGQLDLEWETVQTYLQQSILRPVMHSLNMLAHRQM
EQFQFTLNYVHQMLSIRPEIPPPDIPERLQQPLVFPVPQRPAPEQQRRPNEDETDG