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ClCG11G010000 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G010000
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationCG_Chr11:17765802..17766660
RNA-Seq ExpressionClCG11G010000
SyntenyClCG11G010000
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038601.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]9.6e-0560.98Show/hide
Query:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTS
        ++CL Y W +LFG DI   K RIVENVL  LFHEYN G +S
Subjt:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTS

XP_016903504.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo]7.6e-1057.38Show/hide
Query:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA
        ++CL Y W +LFG DI   K RIVENVL  LFHEYN G +SG C SSS SCS S+    +A
Subjt:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA

XP_031739490.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus]8.4e-0955.74Show/hide
Query:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA
        ++CL Y W +LFG DI   K RIVEN L  LFHEYN G +S  C SSS SCS SV    +A
Subjt:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA

XP_038888298.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Benincasa hispida]1.4e-0857.38Show/hide
Query:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA
        M+CL Y W +L+G DI K K+ +VENVL  LFHEYN G  S    SSS SCS SV V V+A
Subjt:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA

XP_038888299.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Benincasa hispida]1.4e-0857.38Show/hide
Query:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA
        M+CL Y W +L+G DI K K+ +VENVL  LFHEYN G  S    SSS SCS SV V V+A
Subjt:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA

TrEMBL top hitse value%identityAlignment
A0A1S4E5K1 zinc finger BED domain-containing protein RICESLEEPER 2-like3.7e-1057.38Show/hide
Query:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA
        ++CL Y W +LFG DI   K RIVENVL  LFHEYN G +SG C SSS SCS S+    +A
Subjt:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNA

A0A5D3E6G3 Zinc finger BED domain-containing protein RICESLEEPER 3-like4.7e-0560.98Show/hide
Query:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTS
        ++CL Y W +LFG DI   K RIVENVL  LFHEYN G +S
Subjt:  MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGCTTAACTTATTATTGGACAGATCTTTTTGGGTCAGACATTACCAAGATTAAGGTCAGAATAGTTGAAAATGTTTTGGGCCATCTTTTCCATGAATAC
AATAATGGGCAAACTAGTGGTGTTTGTGTTAGTTCTAGTGGTAGTTGTAGTGCAAGTGTCGGTGTTGTTGTTAATGCAGGATTTCGAGTTGTCATGGATGTAGAA
AAATACGTTGACAAGTTGGAAAAAGGAGATTTTGCATTGGAAGAAGGAGATTTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGCTTAACTTATTATTGGACAGATCTTTTTGGGTCAGACATTACCAAGATTAAGGTCAGAATAGTTGAAAATGTTTTGGGCCATCTTTTCCATGAATAC
AATAATGGGCAAACTAGTGGTGTTTGTGTTAGTTCTAGTGGTAGTTGTAGTGCAAGTGTCGGTGTTGTTGTTAATGCAGGATTTCGAGTTGTCATGGATGTAGAA
AAATACGTTGACAAGTTGGAAAAAGGAGATTTTGCATTGGAAGAAGGAGATTTTGCATAA
Protein sequenceShow/hide protein sequence
MECLTYYWTDLFGSDITKIKVRIVENVLGHLFHEYNNGQTSGVCVSSSGSCSASVGVVVNAGFRVVMDVEKYVDKLEKGDFALEEGDFA