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ClCG11G010140 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G010140
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCACTA en-spm transposon protein
Genome locationCG_Chr11:18513538..18514082
RNA-Seq ExpressionClCG11G010140
SyntenyClCG11G010140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037142.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.1e-0536.27Show/hide
Query:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEIS-------FEL--------KKLVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCFNNPKEA
        NTGSS+  T    R RA S  +EL+ +V  +GRIP+ I+       F          +++    +S + KF++HQM T+FKE+R++ H+H+K +++P+EA
Subjt:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEIS-------FEL--------KKLVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCFNNPKEA

Query:  CA
         A
Subjt:  CA

KAA0042499.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.2e-0949.44Show/hide
Query:  MASPFDDNHKVENEFDAIETLNTGSST------GSTVARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQKFIKHQMQTS
        MA   DDNH+ ++EF   + L+ GSST       S V+R R YS NIELD++VER GRIPIE+S E KKLVD     V +  K Q+Q++
Subjt:  MASPFDDNHKVENEFDAIETLNTGSST------GSTVARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQKFIKHQMQTS

TYJ97087.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.8e-0739.56Show/hide
Query:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQK----FIKHQMQTSFKEYRSNLHKHYKCFNNPKEACA
        NTGSS+  T    R RA S  +EL+++V  +GRIP+ I  E++K +        +    F++HQM  +FKE+R++ H+H+K +++P+EACA
Subjt:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQK----FIKHQMQTSFKEYRSNLHKHYKCFNNPKEACA

TYJ98059.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.4e-0532.14Show/hide
Query:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEISFELKK-------------------------LVDMPLSHVQKFIKHQMQTSFKEYRSNLHKH
        NTGSS+  T    R R  S  +EL+++V  +GRIP+ I+  ++K                         ++D     + +F++HQM T+FKE+R++ H+H
Subjt:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEISFELKK-------------------------LVDMPLSHVQKFIKHQMQTSFKEYRSNLHKH

Query:  YKCFNNPKEACA
        +K +++P+EACA
Subjt:  YKCFNNPKEACA

XP_038896646.1 LOW QUALITY PROTEIN: 12-oxophytodienoate reductase 1-like [Benincasa hispida]2.2e-0634.95Show/hide
Query:  NTGSSTGSTVARSRAYSPNIELDQYVERHGR------IPIEISFELKK-------LVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCFNNPKEACAKR
        +T  S+ ++  R R +S NIEL++YV++H R      +P +   EL K       ++D+    +  F++HQMQ SFKE+R++LH+HY+   +P++A A  
Subjt:  NTGSSTGSTVARSRAYSPNIELDQYVERHGR------IPIEISFELKK-------LVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCFNNPKEACAKR

Query:  LKF
         +F
Subjt:  LKF

TrEMBL top hitse value%identityAlignment
A0A5A7T114 CACTA en-spm transposon protein2.0e-0536.27Show/hide
Query:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEIS-------FEL--------KKLVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCFNNPKEA
        NTGSS+  T    R RA S  +EL+ +V  +GRIP+ I+       F          +++    +S + KF++HQM T+FKE+R++ H+H+K +++P+EA
Subjt:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEIS-------FEL--------KKLVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCFNNPKEA

Query:  CA
         A
Subjt:  CA

A0A5A7TMA0 CACTA en-spm transposon protein6.0e-1049.44Show/hide
Query:  MASPFDDNHKVENEFDAIETLNTGSST------GSTVARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQKFIKHQMQTS
        MA   DDNH+ ++EF   + L+ GSST       S V+R R YS NIELD++VER GRIPIE+S E KKLVD     V +  K Q+Q++
Subjt:  MASPFDDNHKVENEFDAIETLNTGSST------GSTVARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQKFIKHQMQTS

A0A5D3BD81 CACTA en-spm transposon protein2.8e-0739.56Show/hide
Query:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQK----FIKHQMQTSFKEYRSNLHKHYKCFNNPKEACA
        NTGSS+  T    R RA S  +EL+++V  +GRIP+ I  E++K +        +    F++HQM  +FKE+R++ H+H+K +++P+EACA
Subjt:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQK----FIKHQMQTSFKEYRSNLHKHYKCFNNPKEACA

A0A5D3BG91 CACTA en-spm transposon protein6.9e-0632.14Show/hide
Query:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEISFELKK-------------------------LVDMPLSHVQKFIKHQMQTSFKEYRSNLHKH
        NTGSS+  T    R R  S  +EL+++V  +GRIP+ I+  ++K                         ++D     + +F++HQM T+FKE+R++ H+H
Subjt:  NTGSSTGST--VARSRAYSPNIELDQYVERHGRIPIEISFELKK-------------------------LVDMPLSHVQKFIKHQMQTSFKEYRSNLHKH

Query:  YKCFNNPKEACA
        +K +++P+EACA
Subjt:  YKCFNNPKEACA

A0A5D3D348 CACTA en-spm transposon protein5.8e-0532.41Show/hide
Query:  NTGSSTGSTVA--RSRAYSPNIELDQYVERHGRIPIEISFELKK---------------------LVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCF
        NTGSS+  T +  R RA S  +EL+++V  +GRIP+ ++   +K                     ++D     + +F++HQM T+FKE+R++ H+H+K +
Subjt:  NTGSSTGSTVA--RSRAYSPNIELDQYVERHGRIPIEISFELKK---------------------LVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCF

Query:  NNPKEACA
        ++P+EA A
Subjt:  NNPKEACA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGTCCGTTTGATGATAACCACAAAGTAGAAAATGAATTTGATGCAATTGAGACTCTTAACACAGGATCTTCCACAGGTTCAACGGTTGCTAGATCACGTGCATA
CTCACCTAACATTGAGTTGGATCAATATGTCGAACGTCATGGGAGAATTCCAATCGAGATCTCGTTTGAGTTGAAGAAGCTAGTTGACATGCCCTTATCTCATGTGCAAA
AGTTCATCAAACATCAAATGCAAACATCCTTTAAAGAGTATAGGTCGAATTTGCATAAACACTACAAGTGTTTTAACAATCCTAAAGAGGCATGTGCAAAGCGACTTAAA
TTC
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGTCCGTTTGATGATAACCACAAAGTAGAAAATGAATTTGATGCAATTGAGACTCTTAACACAGGATCTTCCACAGGTTCAACGGTTGCTAGATCACGTGCATA
CTCACCTAACATTGAGTTGGATCAATATGTCGAACGTCATGGGAGAATTCCAATCGAGATCTCGTTTGAGTTGAAGAAGCTAGTTGACATGCCCTTATCTCATGTGCAAA
AGTTCATCAAACATCAAATGCAAACATCCTTTAAAGAGTATAGGTCGAATTTGCATAAACACTACAAGTGTTTTAACAATCCTAAAGAGGCATGTGCAAAGCGACTTAAA
TTC
Protein sequenceShow/hide protein sequence
MASPFDDNHKVENEFDAIETLNTGSSTGSTVARSRAYSPNIELDQYVERHGRIPIEISFELKKLVDMPLSHVQKFIKHQMQTSFKEYRSNLHKHYKCFNNPKEACAKRLK
F