; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG11G010600 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G010600
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPolyprotein
Genome locationCG_Chr11:20497455..20498597
RNA-Seq ExpressionClCG11G010600
SyntenyClCG11G010600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.7e-1648.33Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL
        MS+  Y MD+GFT VTR ++  + IW+GSPT+SSTPPRPS + IRPS G++Q+RP  SPS+   S ST P+TYS  V   +RF PRPEI +Y  K     
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL

Query:  CVGISKLNQSLNIRSLMKVI
           I    QSL +  ++  I
Subjt:  CVGISKLNQSLNIRSLMKVI

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]5.8e-2061.05Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK
        +S++ YAMD+GFT VTR+ + S GIW+GSPT+SSTPPRPS++ IRPSSG+VQ+RP  SPS+   S ST P+TYS  V P +RF PRPEI +Y  K
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]1.9e-1555.79Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK
        M+S+ YAMD+ FT VTR ++ S+ I  GSPT+SSTPPRP ++ IRPS G+VQ+RP  SPS+   S ST P+TYS  V P +RF PRP+I +Y  K
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]8.7e-1655.79Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK
        MS++ YAMD+GFT VTR +  S+ I +GSPTKSSTPPR S++ IRPSS +VQ+RP+ SP +   S ST P+TYS ++ P +RF PR EI +Y  K
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]6.0e-1736.81Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL
        MS + YAMD+G+T V + ++ S+GIW+ SP +SSTPPRPS + I P   ++Q+R   SPS+   S ST P+TYS  V P ++F PR EI +Y  K     
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL

Query:  CVGISKLNQSLNIRSLMKVIKIKWWSNANRDQAGLKAVKAWFTNNGFLQDVSIRKNVEFLNNKLKLLARLAQTSLESELQQI
                    I     +I+++                  +  NG LQD+  RKN +FLN+KLK LA L Q +++++ Q++
Subjt:  CVGISKLNQSLNIRSLMKVIKIKWWSNANRDQAGLKAVKAWFTNNGFLQDVSIRKNVEFLNNKLKLLARLAQTSLESELQQI

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein2.8e-2061.05Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK
        +S++ YAMD+GFT VTR+ + S GIW+GSPT+SSTPPRPS++ IRPSSG+VQ+RP  SPS+   S ST P+TYS  V P +RF PRPEI +Y  K
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK

A0A5A7URC1 Uncharacterized protein9.3e-1655.79Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK
        M+S+ YAMD+ FT VTR ++ S+ I  GSPT+SSTPPRP ++ IRPS G+VQ+RP  SPS+   S ST P+TYS  V P +RF PRP+I +Y  K
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPK

A0A5D3BI61 Uncharacterized protein2.9e-1736.81Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL
        MS + YAMD+G+T V + ++ S+GIW+ SP +SSTPPRPS + I P   ++Q+R   SPS+   S ST P+TYS  V P ++F PR EI +Y  K     
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL

Query:  CVGISKLNQSLNIRSLMKVIKIKWWSNANRDQAGLKAVKAWFTNNGFLQDVSIRKNVEFLNNKLKLLARLAQTSLESELQQI
                    I     +I+++                  +  NG LQD+  RKN +FLN+KLK LA L Q +++++ Q++
Subjt:  CVGISKLNQSLNIRSLMKVIKIKWWSNANRDQAGLKAVKAWFTNNGFLQDVSIRKNVEFLNNKLKLLARLAQTSLESELQQI

A0A5D3BM67 Uncharacterized protein1.6e-1547.5Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL
        MS++ YAMD+GFT VTR ++ S+ I + S T+SSTPPRPS++ IRP  G VQ+RP  SPS+   S ST P+TYS  V P +RF PRPEI +Y  K     
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL

Query:  CVGISKLNQSLNIRSLMKVI
         + I    QS+ +   +  I
Subjt:  CVGISKLNQSLNIRSLMKVI

E5GCE6 Uncharacterized protein8.5e-1748.33Show/hide
Query:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL
        MS+  Y MD+GFT VTR ++  + IW+GSPT+SSTPPRPS + IRPS G++Q+RP  SPS+   S ST P+TYS  V   +RF PRPEI +Y  K     
Subjt:  MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRL

Query:  CVGISKLNQSLNIRSLMKVI
           I    QSL +  ++  I
Subjt:  CVGISKLNQSLNIRSLMKVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCTAATAGTTATGCAATGGATATAGGGTTCACTCCAGTGACTCGATATAAAACAATATCCACTGGCATATGGTTAGGATCTCCAACGAAGTCATCTACTCCACC
GAGGCCTTCTTCCTCTTCGATTCGTCCTTCTAGCGGCCTTGTCCAATTGAGACCTATTGTCTCACCGTCAACAGTGTCGTCATCCAGATCGACTACTCCTTCAACCTATT
CCACTATCGTTCAACCAAGACGACGTTTCCAACCACGTCCAGAAATCACAACATACATTCCAAAGCAGTTCCCTAGATTATGTGTTGGGATTTCAAAATTGAATCAAAGC
CTCAATATAAGAAGTTTAATGAAAGTTATAAAAATCAAATGGTGGTCCAATGCCAACCGAGATCAAGCTGGCTTGAAAGCGGTCAAAGCTTGGTTTACCAATAATGGCTT
CCTGCAAGATGTATCAATCAGAAAGAATGTTGAATTCTTGAACAACAAATTGAAGCTTCTGGCAAGATTAGCTCAAACTTCATTAGAATCAGAGTTGCAACAAATCTCAC
ATAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCTAATAGTTATGCAATGGATATAGGGTTCACTCCAGTGACTCGATATAAAACAATATCCACTGGCATATGGTTAGGATCTCCAACGAAGTCATCTACTCCACC
GAGGCCTTCTTCCTCTTCGATTCGTCCTTCTAGCGGCCTTGTCCAATTGAGACCTATTGTCTCACCGTCAACAGTGTCGTCATCCAGATCGACTACTCCTTCAACCTATT
CCACTATCGTTCAACCAAGACGACGTTTCCAACCACGTCCAGAAATCACAACATACATTCCAAAGCAGTTCCCTAGATTATGTGTTGGGATTTCAAAATTGAATCAAAGC
CTCAATATAAGAAGTTTAATGAAAGTTATAAAAATCAAATGGTGGTCCAATGCCAACCGAGATCAAGCTGGCTTGAAAGCGGTCAAAGCTTGGTTTACCAATAATGGCTT
CCTGCAAGATGTATCAATCAGAAAGAATGTTGAATTCTTGAACAACAAATTGAAGCTTCTGGCAAGATTAGCTCAAACTTCATTAGAATCAGAGTTGCAACAAATCTCAC
ATAGATAG
Protein sequenceShow/hide protein sequence
MSSNSYAMDIGFTPVTRYKTISTGIWLGSPTKSSTPPRPSSSSIRPSSGLVQLRPIVSPSTVSSSRSTTPSTYSTIVQPRRRFQPRPEITTYIPKQFPRLCVGISKLNQS
LNIRSLMKVIKIKWWSNANRDQAGLKAVKAWFTNNGFLQDVSIRKNVEFLNNKLKLLARLAQTSLESELQQISHR