CuGenDBv2

Gene ID	ClCG11G011990
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	transcription factor bHLH146-like
Genome location	CG_Chr11:24481691..24482278
RNA-Seq Expression	ClCG11G011990
Synteny	ClCG11G011990
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005488 - binding (molecular function)
InterPro domains	IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011648935.1 transcription factor bHLH146 [Cucumis sativus]

2.8e-57

73.5

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQ
        M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLVKISH QQQ+NF+KLVKFEVDMAMA SASEF+WGIALKKKLLQR+   +GNGNENGFDFS+Q
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVKCLELQVNVLRGLVETNTF
        TVK + +E    EEE+   EEEEEEEEE               MENGLMKLRKIIPGG +F++GG   EEDDLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVKCLELQVNVLRGLVETNTF

XP_016901419.1 PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]

3.3e-58

74.88

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFS
        M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLVKISH QQQ+NFQKLV+FEVDMAMA SASEF+WGIALKKKLLQR+     +GNG+ENGFDFS
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFS

Query:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTESYVKCLELQVNVLRGLVET
        LQT+K    +    EEE+  E+EEEEEEEEEEE            MENGLMKLRKIIPGG DF++GG    EEDDLLKQTESYVKCLELQVNVLRGLVET
Subjt:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTESYVKCLELQVNVLRGLVET

Query:  NTF
        NTF
Subjt:  NTF

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]

3.0e-51

70.05

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ
        MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFEVDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF  SLQ
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         VKFS+                 E  E E+EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]

1.6e-52

70.05

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ
        MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFEVDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF FSLQ
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        TVKFSQ                    E  E E EE EE +E K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

XP_038877916.1 transcription factor bHLH146-like [Benincasa hispida]

1.0e-59

74.26

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHH------QQQKNFQKLVKFEVDMAMALSAS-EFAWGIALKKKLLQREVGNGNENGFD
        MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVK+LMTSLVKISHH      QQ++NFQK VKFEVDMAMA SAS +FAWGIALKKKLLQR+   GNEN FD
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHH------QQQKNFQKLVKFEVDMAMALSAS-EFAWGIALKKKLLQREVGNGNENGFD

Query:  FSLQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETN
        FSLQTVKFSQ                     E   +EEEEE EEE+KME+GLMKLRKIIPGG+DFN+   E+DDLLKQTESYVKCLELQVNVLRGLVETN
Subjt:  FSLQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETN

Query:  TF
        TF
Subjt:  TF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJA7 Uncharacterized protein

1.4e-57

73.5

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQ
        M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLVKISH QQQ+NF+KLVKFEVDMAMA SASEF+WGIALKKKLLQR+   +GNGNENGFDFS+Q
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVKCLELQVNVLRGLVETNTF
        TVK + +E    EEE+   EEEEEEEEE               MENGLMKLRKIIPGG +F++GG   EEDDLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVKCLELQVNVLRGLVETNTF

A0A1S4DZN3 uncharacterized protein At4g30180

1.6e-58

74.88

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFS
        M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLVKISH QQQ+NFQKLV+FEVDMAMA SASEF+WGIALKKKLLQR+     +GNG+ENGFDFS
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFS

Query:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTESYVKCLELQVNVLRGLVET
        LQT+K    +    EEE+  E+EEEEEEEEEEE            MENGLMKLRKIIPGG DF++GG    EEDDLLKQTESYVKCLELQVNVLRGLVET
Subjt:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTESYVKCLELQVNVLRGLVET

Query:  NTF
        NTF
Subjt:  NTF

A0A6J1DIU0 transcription factor bHLH146

8.8e-49

65.83

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQR-EVGNGN-ENGFDFSLQT
        MGRQIVRK  RRVFSLEPNK+ Y MFARNY K LM SL KIS + Q  N QK+VKFEVDMAMALSASEFAWG ALK+KLLQ+ E GNGN  N FDFSLQT
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQR-EVGNGN-ENGFDFSLQT

Query:  VKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGG---SDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        +KFS+                         E+EEEEEE+++KMENGL+KLRKI+PGG   +D N   LEEDDLLKQTESY+KCLELQVNVLR LV+TNT
Subjt:  VKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGG---SDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1FJ33 transcription factor bHLH146-like

1.5e-51

70.05

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ
        MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFEVDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF  SLQ
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         VKFS+                 E  E E+EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1I0E6 transcription factor bHLH146-like

8.8e-49

70.05

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHH---QQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ
        MGRQI+RK  +RV SLEP+K+AYTMFARNYVKYLMTSL KISHH    QQ+NFQKLVKFEVDMAMA SA+EF+WG ALKKKLLQRE  NG+ NGF FSL 
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHH---QQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         VKFS+              E  E E+EE EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

SwissProt top hits

e value

%identity

Alignment

Q9SUM5 Transcription factor bHLH146

1.7e-12

31.44

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVK
        M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L K+  +  + + ++ VK EVDMA+ALSA EFAW   L +KL          +     ++ + 
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVK

Query:  FSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
                                   E  ++E   EE  +E  L +L+K++PGG + NV     +++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  FSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors

8.0e-10

35.68

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKI-----SHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFS
        M RQI+ K  +RVFSL+PNK    +FAR YV +L+ +L KI     S    +++ ++ VK EVDMA ALSA EFAW   L++KLL         + +D  
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKI-----SHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFS

Query:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        + T                E  E   + +  E+ ++ +EEEE  +++  L +L+K++PGG + N+     +++L +  SY+ CLELQ+ VL+ +V+ NT
Subjt:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators

1.2e-13

31.44

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Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVK
        M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L K+  +  + + ++ VK EVDMA+ALSA EFAW   L +KL          +     ++ + 
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVK

Query:  FSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
                                   E  ++E   EE  +E  L +L+K++PGG + NV     +++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  FSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

Sequences

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CDS sequence

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ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATC
TTTAGTTAAAATCTCTCATCATCAACAACAAAAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTG
CTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGATGGAAAATGGGTTGATGAA
GCTGAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGA
ATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

mRNA sequence

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Protein sequence

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MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNTF

ClCG11G011990 (gene) of Watermelon (Charleston Gray) v2.5 genome