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ClCG11G012440 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G012440
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionReverse transcriptase domain-containing protein
Genome locationCG_Chr11:25417670..25426170
RNA-Seq ExpressionClCG11G012440
SyntenyClCG11G012440
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]1.3e-2145.63Show/hide
Query:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR
        G N+DD  ++     W C    +P  Y G+PLGGNP+   FWDP++E ++ +   W+ + +SKGGRLT+IQ VL S+P YY+SLF+ P+ ++  IEK MR
Subjt:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR

Query:  KFL
         FL
Subjt:  KFL

VVA13439.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-2145.63Show/hide
Query:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR
        G N+DD  ++     W C    +P  Y G+PLGGNP+   FWDP++E ++ +   W+ + +SKGGRLT+IQ VL S+P YY+SLF+ P+ ++  IEK MR
Subjt:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR

Query:  KFL
         FL
Subjt:  KFL

VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-2145.63Show/hide
Query:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR
        G N+DD  ++     W C    +P  Y G+PLGGNP+   FWDP++E ++ +   W+ + +SKGGRLT+IQ VL S+P YY+SLF+ P+ ++  IEK MR
Subjt:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR

Query:  KFL
         FL
Subjt:  KFL

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-2145.63Show/hide
Query:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR
        G N+DD  ++     W C    +P  Y G+PLGGNP+   FWDP++E ++ +   W+ + +SKGGRLT+IQ VL S+P YY+SLF+ P+ ++  IEK MR
Subjt:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR

Query:  KFL
         FL
Subjt:  KFL

XP_022143310.1 uncharacterized protein LOC111013210 [Momordica charantia]7.6e-2260.67Show/hide
Query:  IWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMRKFL
        IW C        Y GMPLGGNPK + FWDPIIE   RK   W+YS ISK GRLTLIQ +L+SLPTYYLS+FK+P+ ++K +EK MR FL
Subjt:  IWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMRKFL

TrEMBL top hitse value%identityAlignment
A0A4Y1R3V4 VIRB2-interacting protein 26.3e-2245.63Show/hide
Query:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR
        G N+DD  ++     W C    +P  Y G+PLGGNP+   FWDP++E ++ +   W+ + +SKGGRLT+IQ VL S+P YY+SLF+ P+ ++  IEK MR
Subjt:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR

Query:  KFL
         FL
Subjt:  KFL

A0A5H2XKI7 VIRB2-interacting protein 26.3e-2245.63Show/hide
Query:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR
        G N+DD  ++     W C    +P  Y G+PLGGNP+   FWDP++E ++ +   W+ + +SKGGRLT+IQ VL S+P YY+SLF+ P+ ++  IEK MR
Subjt:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR

Query:  KFL
         FL
Subjt:  KFL

A0A6J1CNG6 uncharacterized protein LOC1110132103.7e-2260.67Show/hide
Query:  IWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMRKFL
        IW C        Y GMPLGGNPK + FWDPIIE   RK   W+YS ISK GRLTLIQ +L+SLPTYYLS+FK+P+ ++K +EK MR FL
Subjt:  IWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMRKFL

M5WJI4 zf-RVT domain-containing protein2.2e-2245.63Show/hide
Query:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR
        G N+DD  ++     W C    +P  Y G+PLGGNP+   FWDP++E ++ +   W+ + +SKGGRLT+IQ VL S+P YY+SLF+ P+ ++  IEK MR
Subjt:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR

Query:  KFL
         FL
Subjt:  KFL

M5XUF8 Reverse transcriptase domain-containing protein (Fragment)4.8e-2244.66Show/hide
Query:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR
        G N+DD  ++     W C    +P  Y G+PLGGNP+   FWDP++E ++ +   W+ + +SKGGRLT+IQ VL S+P YY+S+F+ P+ ++  IEK MR
Subjt:  GTNVDDAFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMR

Query:  KFL
         FL
Subjt:  KFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATGTCGAAAAAACTCCTAAGAAAGATGTTCCACCTGCTACAGAGAAGAAGCTAAAATTGAAGTTCAGGATCTTGCTGCATGCACAGAATGATGAAAAG
GATATTAACTTTTTCCTGGATAAACCTCAGAAATTCCCCGGATCAAGTGGAAGAAGGCAGTATAAAGTCCTTGCCTCCATTTGTTTCAGGAAGCTAAAATTGAAG
TTCAGGATCTTGCTGCATGCACAGAATGATGAAAAGGATATTAACTTTTTCCTGGATAAACCTCAGAAATTCCCCGTCTTCGGTTCTGGCACTAATGTTGATGAC
GCCTTTATCTCTTTGGCCTGTTCTATATGGCAATGCTCTGCTACCCGCTTTCCTTTTGAATACCCTGGGATGCCTCTTGGAGGAAACCCAAAGTTGACTACTTTT
TGGGATCCTATTATTGAACATATTGATCGAAAGTTCTCCTGTTGGCAATACTCATATATTTCAAAAGGAGGTAGACTAACCTTAATACAGGTTGTTCTCAATAGT
CTTCCCACATACTACCTCTCACTATTCAAAGCTCCAGTAGCCATTAGCAAGTTAATTGAGAAAAAAATGAGGAAGTTCCTCTGTCTGGAAATGAGTTTATCTCTG
TCAAAGATGCTTGGAATGAAGATTTGGATGATTGGAATCCATCTTTTAGAAGACTGCTTCTGGACAGAGAACAAAAAATATGGAACTTTCAATCGGCTATTAGCA
TTCTTTCCAAGCAAGCATGCTATATTAGCTTTACATCTCATTCGTGATATTGGACGTTTAGCATTCTTTCCAAGCAAGCATGCTATATTAGCTTTACATCTCATT
CGTGATATTGGACGTGTATATGAAACACTTTCTTTTTTGCTGTCTACTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATGTCGAAAAAACTCCTAAGAAAGATGTTCCACCTGCTACAGAGAAGAAGCTAAAATTGAAGTTCAGGATCTTGCTGCATGCACAGAATGATGAAAAG
GATATTAACTTTTTCCTGGATAAACCTCAGAAATTCCCCGGATCAAGTGGAAGAAGGCAGTATAAAGTCCTTGCCTCCATTTGTTTCAGGAAGCTAAAATTGAAG
TTCAGGATCTTGCTGCATGCACAGAATGATGAAAAGGATATTAACTTTTTCCTGGATAAACCTCAGAAATTCCCCGTCTTCGGTTCTGGCACTAATGTTGATGAC
GCCTTTATCTCTTTGGCCTGTTCTATATGGCAATGCTCTGCTACCCGCTTTCCTTTTGAATACCCTGGGATGCCTCTTGGAGGAAACCCAAAGTTGACTACTTTT
TGGGATCCTATTATTGAACATATTGATCGAAAGTTCTCCTGTTGGCAATACTCATATATTTCAAAAGGAGGTAGACTAACCTTAATACAGGTTGTTCTCAATAGT
CTTCCCACATACTACCTCTCACTATTCAAAGCTCCAGTAGCCATTAGCAAGTTAATTGAGAAAAAAATGAGGAAGTTCCTCTGTCTGGAAATGAGTTTATCTCTG
TCAAAGATGCTTGGAATGAAGATTTGGATGATTGGAATCCATCTTTTAGAAGACTGCTTCTGGACAGAGAACAAAAAATATGGAACTTTCAATCGGCTATTAGCA
TTCTTTCCAAGCAAGCATGCTATATTAGCTTTACATCTCATTCGTGATATTGGACGTTTAGCATTCTTTCCAAGCAAGCATGCTATATTAGCTTTACATCTCATT
CGTGATATTGGACGTGTATATGAAACACTTTCTTTTTTGCTGTCTACTCGATGA
Protein sequenceShow/hide protein sequence
MEDVEKTPKKDVPPATEKKLKLKFRILLHAQNDEKDINFFLDKPQKFPGSSGRRQYKVLASICFRKLKLKFRILLHAQNDEKDINFFLDKPQKFPVFGSGTNVDD
AFISLACSIWQCSATRFPFEYPGMPLGGNPKLTTFWDPIIEHIDRKFSCWQYSYISKGGRLTLIQVVLNSLPTYYLSLFKAPVAISKLIEKKMRKFLCLEMSLSL
SKMLGMKIWMIGIHLLEDCFWTENKKYGTFNRLLAFFPSKHAILALHLIRDIGRLAFFPSKHAILALHLIRDIGRVYETLSFLLSTR