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ClCG11G012760 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G012760
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionG-patch domain-containing protein
Genome locationCG_Chr11:26029490..26033737
RNA-Seq ExpressionClCG11G012760
SyntenyClCG11G012760
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000467 - G-patch domain
IPR039146 - G patch domain and ankyrin repeat-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147099.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]3.2e-5284.96Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KETTD   SD+KNNQ       ERPPPKKA+G
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        L+KR RKM+EEERLFQEKEFE+AFFREFWPENV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

XP_008445906.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo]8.3e-5386.47Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KET D  ASD+KNNQ       ERPPPKK +G
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        LSKR RKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

XP_016900186.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo]8.3e-5386.47Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KET D  ASD+KNNQ       ERPPPKK +G
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        LSKR RKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

XP_022945156.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata]2.8e-4881.2Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLGADKVKKKLKETTD  ASD KN         ERPP KKA+ 
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        +SK+ RKM EEERLF+EKEFERAFFREFWP+NV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

XP_038891672.1 protein PXR1 [Benincasa hispida]1.9e-4983.46Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLE GSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQAS+KNNKRGLGADKVKKKLKETTD  ASD+KNNQ             KA+G
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        LSKR RKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

TrEMBL top hitse value%identityAlignment
A0A0A0KPR8 G-patch domain-containing protein1.5e-5284.96Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KETTD   SD+KNNQ       ERPPPKKA+G
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        L+KR RKM+EEERLFQEKEFE+AFFREFWPENV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

A0A1S3BEH2 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X24.0e-5386.47Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KET D  ASD+KNNQ       ERPPPKK +G
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        LSKR RKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

A0A1S4DW19 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X14.0e-5386.47Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KET D  ASD+KNNQ       ERPPPKK +G
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        LSKR RKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

A0A6J1G054 G patch domain and ankyrin repeat-containing protein 1 homolog1.3e-4881.2Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLGADKVKKKLKETTD  ASD KN         ERPP KKA+ 
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        +SK+ RKM EEERLF+EKEFERAFFREFWP+NV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

A0A6J1HTU1 G patch domain and ankyrin repeat-containing protein 1 homolog6.7e-4880.45Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG
        MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLGADKVKKKLKE+TD  ASD KN         ERP  KKA+ 
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARG

Query:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV
        +SK+TRKM EEERLF+EKEFERAFFREFWP+NV
Subjt:  LSKRTRKMEEEERLFQEKEFERAFFREFWPENV

SwissProt top hitse value%identityAlignment
A0JMV4 RNA-binding protein 5-A7.9e-0652.17Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA

A2A6A1 G patch domain-containing protein 86.1e-0651.11Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG
        I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG

Q6C233 Protein SQS15.5e-0757.14Show/hide
Query:  AAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA
        A AID SNIG  LL+K GW  G GLG   +G  EP+ A VK +KRG+GA
Subjt:  AAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA

Q6DDU9 RNA-binding protein 5-B7.9e-0652.17Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA

Q9UKJ3 G patch domain-containing protein 86.1e-0651.11Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG
        I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG

Arabidopsis top hitse value%identityAlignment
AT3G52350.1 D111/G-patch domain-containing protein8.7e-2451.56Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADK-VKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRT
        S  S  + AI SSNIGFQLLKKHGW+EGTGLG+ EQG L P+QA  K+NK+GLGA+K  K+K  +  DT   +                 KK++ LSK+ 
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADK-VKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRT

Query:  RKMEEEERLFQEKEFERAFFREFWPENV
         KM E E+   E EFERAF REFWP+NV
Subjt:  RKMEEEERLFQEKEFERAFFREFWPENV

AT3G54230.1 suppressor of abi3-51.3e-0647.06Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK

AT3G54230.2 suppressor of abi3-51.3e-0647.06Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK

AT5G08535.1 D111/G-patch domain-containing protein2.6e-2855.91Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTR
        SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+NKRG+GA +  K  ++    +A D++ +             K+++ LSK+ R
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTR

Query:  KMEEEERLFQEKEFERAFFREFWPENV
        KM E E+  QEKEFERAFFREFWP+NV
Subjt:  KMEEEERLFQEKEFERAFFREFWPENV

AT5G08535.2 D111/G-patch domain-containing protein2.6e-2855.91Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTR
        SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+NKRG+GA +  K  ++    +A D++ +             K+++ LSK+ R
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTR

Query:  KMEEEERLFQEKEFERAFFREFWPENV
        KM E E+  QEKEFERAFFREFWP+NV
Subjt:  KMEEEERLFQEKEFERAFFREFWPENV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACGGGCCT
TGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATA
CTAAAGCCTCTGATAAGAAAAATAACCAGGTAAAACATTTGCTAGGTGTGGAACGTCCTCCTCCAAAGAAAGCGAGGGGGCTGTCAAAAAGGACGAGGAAGATGGAAGAG
GAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
TGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAACAAGGTTGAAGACTCGGCACGCTAGGGTTAGGCGAAAGTGCGAAATTTCTACAAGTTTCGAATTGAGTTA
GGGTTTGGCAACATTCAGTCTTCTAAGAATTCACCCTCTGATCTCCATTGGACCTCAAGTTTATCCAGAAGTCCTTTCTCAGTTCCACAGGAGGAAGGATGGACTTGGAG
TCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGA
GCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTG
ATAAGAAAAATAACCAGGTAAAACATTTGCTAGGTGTGGAACGTCCTCCTCCAAAGAAAGCGAGGGGGCTGTCAAAAAGGACGAGGAAGATGGAAGAGGAAGAGAGGCTA
TTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGATACAATACTCCCAGTGTAAGCAAATTCAGATTGTTTGTAATGTAAAAGCC
TTTTTAGTTATGGCTTTAAAGCAGTCAGCATTCAACCTAGTAGTATGTAAATATGATTACACCCAACAGAGTTGTGAAATTTAATTTTGTTTACTATTTGTTATATTTGT
ACCTTTTAATTTCTGTGAGCCTC
Protein sequenceShow/hide protein sequence
MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEE
EERLFQEKEFERAFFREFWPENV