; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG11G013640 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G013640
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionAlpha-ketoglutarate-dependent dioxygenase
Genome locationCG_Chr11:26815208..26815759
RNA-Seq ExpressionClCG11G013640
SyntenyClCG11G013640
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0035513 - oxidative RNA demethylation (biological process)
GO:0035552 - oxidative single-stranded DNA demethylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0008198 - ferrous iron binding (molecular function)
GO:0035515 - oxidative RNA demethylase activity (molecular function)
GO:0035516 - oxidative DNA demethylase activity (molecular function)
InterPro domainsIPR004574 - Alkylated DNA repair protein AlkB
IPR027450 - Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR037151 - Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648677.1 hypothetical protein Csa_009164 [Cucumis sativus]2.5e-4694.95Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKSRQDPP+AMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLE H +NQDDLH LEYIRTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

XP_004135327.1 alpha-ketoglutarate-dependent dioxygenase alkB isoform X1 [Cucumis sativus]2.5e-4694.95Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKSRQDPP+AMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLE H +NQDDLH LEYIRTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

XP_008446031.1 PREDICTED: LOW QUALITY PROTEIN: alpha-ketoglutarate-dependent dioxygenase alkB [Cucumis melo]1.0e-4796.97Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKA FLLGGKSRQDPP+AMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERH SNQDDLHFLEYIRTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

XP_031740902.1 alpha-ketoglutarate-dependent dioxygenase alkB isoform X2 [Cucumis sativus]2.5e-4694.95Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKSRQDPP+AMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLE H +NQDDLH LEYIRTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

XP_038891364.1 alpha-ketoglutarate-dependent dioxygenase alkB [Benincasa hispida]2.3e-4795.96Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKSRQDPP+AMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEIS LERHFSNQDDLHFLEYI+ SRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

TrEMBL top hitse value%identityAlignment
A0A0A0KS00 Fe2OG dioxygenase domain-containing protein1.2e-4694.95Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKSRQDPP+AMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLE H +NQDDLH LEYIRTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

A0A1S3BE32 LOW QUALITY PROTEIN: alpha-ketoglutarate-dependent dioxygenase alkB5.0e-4896.97Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKA FLLGGKSRQDPP+AMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERH SNQDDLHFLEYIRTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

A0A6J1DG90 alpha-ketoglutarate-dependent dioxygenase alkB2.3e-4592.93Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFID E++E S LE+ FSNQDDLHFLEYIRTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

A0A6J1FZQ9 alpha-ketoglutarate-dependent dioxygenase alkB7.9e-4693.94Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIF DEESEEIS LE+ FS++DDLHFLEYIRTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

A0A6J1HQB4 alpha-ketoglutarate-dependent dioxygenase alkB2.5e-4491.92Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKSRQD PVAMFLRSGDVVLMAGEARECFHGVPRIF DEESEEIS LE+ FS++DDLHFLEY+RTSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

SwissProt top hitse value%identityAlignment
O60066 Alpha-ketoglutarate-dependent dioxygenase abh13.6e-1135.05Show/hide
Query:  EADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQV
        E D + P++S+S+G   I+L+G +SR + P A+ L SGDVV+M G +R+ FH VP+I  +     +    + +          +I   R+N N+RQV
Subjt:  EADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQV

P0CB42 Nucleic acid dioxygenase ALKBH16.5e-1337.84Show/hide
Query:  EADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEI--------------SFLERHFSNQDDLHFLEYIR
        E D SKP++S S G  AIFLLGG  R + P AMF+ SGD+++M+G +R   H VPR+    + E +              + L    S +D      Y+R
Subjt:  EADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEI--------------SFLERHFSNQDDLHFLEYIR

Query:  TSRININIRQV
        T+R+N+ +RQV
Subjt:  TSRININIRQV

Q13686 Nucleic acid dioxygenase ALKBH12.2e-1336.94Show/hide
Query:  EADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEI--------------SFLERHFSNQDDLHFLEYIR
        E D SKP++S S G  AIFLLGG  R + P AMF+ SGD+++M+G +R   H VPR+  + E E +                +    S +D      Y++
Subjt:  EADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEI--------------SFLERHFSNQDDLHFLEYIR

Query:  TSRININIRQV
        T+R+N+ +RQV
Subjt:  TSRININIRQV

Q54N08 Alpha-ketoglutarate-dependent dioxygenase alkB1.8e-1540Show/hide
Query:  EADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYI--RTSRININIRQVF
        E +  KPI+S+S G  A+FL+G ++R   PV +F+RSGD+V+M G +R C+HGV +I   E S ++  ++ +  +QD  + ++++  +  R+NIN RQVF
Subjt:  EADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYI--RTSRININIRQVF

Q9SA98 Alpha-ketoglutarate-dependent dioxygenase alkB4.5e-3876.77Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKS+ DPP AM+LRSGDVVLMAGEARECFHG+PRIF  EE+ +I  LE   S++    F EYI+TSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

Arabidopsis top hitse value%identityAlignment
AT1G11780.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein3.2e-3976.77Show/hide
Query:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF
        MEADWSKPIVSMSLGCKAIFLLGGKS+ DPP AM+LRSGDVVLMAGEARECFHG+PRIF  EE+ +I  LE   S++    F EYI+TSRININIRQVF
Subjt:  MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF

AT3G14140.1 2-oxoglutarate-dependent dioxygenase family protein3.0e-0537.5Show/hide
Query:  PIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGV--------PRIFIDEE
        PIVS S+G  A FL G +   D    + L SGDV++    +R  FHGV        PR+F  ++
Subjt:  PIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGV--------PRIFIDEE

AT3G14160.1 2-oxoglutarate-dependent dioxygenase family protein1.2e-0645.1Show/hide
Query:  PIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRI
        P+VS S+G  A FL G +  +D    + L SGDV+L  G +R+ FHGV  I
Subjt:  PIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRI

AT5G01780.1 2-oxoglutarate-dependent dioxygenase family protein9.3e-0735.96Show/hide
Query:  PIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIR
        PIVS S+G  A FL G K   +    + L SGDV++  GE+R  FHGV  I     S  +S L               +RT R+N+  R
Subjt:  PIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIR

AT5G01780.2 2-oxoglutarate-dependent dioxygenase family protein9.3e-0735.96Show/hide
Query:  PIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIR
        PIVS S+G  A FL G K   +    + L SGDV++  GE+R  FHGV  I     S  +S L               +RT R+N+  R
Subjt:  PIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGACTGGAGCAAGCCAATTGTTAGCATGAGTTTGGGTTGCAAAGCTATTTTTCTTTTAGGTGGTAAGTCGAGACAGGATCCACCCGTAGCCATGTTTCTTCG
AAGCGGAGATGTCGTGCTAATGGCTGGAGAAGCAAGGGAATGTTTCCATGGTGTACCACGGATCTTCATCGATGAAGAAAGTGAAGAAATTTCTTTTCTTGAAAGGCATT
TCTCAAATCAAGATGATTTGCACTTTCTGGAATACATAAGAACTTCAAGAATAAACATCAACATTAGACAGGTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGACTGGAGCAAGCCAATTGTTAGCATGAGTTTGGGTTGCAAAGCTATTTTTCTTTTAGGTGGTAAGTCGAGACAGGATCCACCCGTAGCCATGTTTCTTCG
AAGCGGAGATGTCGTGCTAATGGCTGGAGAAGCAAGGGAATGTTTCCATGGTGTACCACGGATCTTCATCGATGAAGAAAGTGAAGAAATTTCTTTTCTTGAAAGGCATT
TCTCAAATCAAGATGATTTGCACTTTCTGGAATACATAAGAACTTCAAGAATAAACATCAACATTAGACAGGTTTTCTGA
Protein sequenceShow/hide protein sequence
MEADWSKPIVSMSLGCKAIFLLGGKSRQDPPVAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLERHFSNQDDLHFLEYIRTSRININIRQVF