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ClCG11G013760 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G013760
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionSignal peptidase complex subunit 1
Genome locationCG_Chr11:26951079..26951826
RNA-Seq ExpressionClCG11G013760
SyntenyClCG11G013760
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006465 - signal peptide processing (biological process)
GO:0045047 - protein targeting to ER (biological process)
GO:0005787 - signal peptidase complex (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR009542 - Signal peptidase complex subunit Spc1/SPCS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51679.1 hypothetical protein Csa_009252 [Cucumis sativus]5.2e-4196.81Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQLMQ+MLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEP VVLKKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

XP_004135313.1 probable signal peptidase complex subunit 1 [Cucumis sativus]5.2e-4196.81Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQLMQ+MLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEP VVLKKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

XP_008446045.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo]2.6e-4095.74Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEP VV KKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

XP_023549840.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]1.4e-3892.55Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQ+MQIMLVAFAVVAFLTGYVM SFR+M+LVYAGGV LTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEP VVLKKKP KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

XP_038882954.1 probable signal peptidase complex subunit 1 [Benincasa hispida]3.7e-3993.62Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQLMQIMLVAFAVVAFLTGY+MGSFR+MILVYAGGV LTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEP VVLKKK AKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

TrEMBL top hitse value%identityAlignment
A0A0A0KS09 Uncharacterized protein2.5e-4196.81Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQLMQ+MLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEP VVLKKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

A0A1S3BET6 probable signal peptidase complex subunit 11.2e-4095.74Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEP VV KKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

A0A5D3CZV6 Putative signal peptidase complex subunit 11.2e-4095.74Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEP VV KKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

A0A6J1GX63 probable signal peptidase complex subunit 19.8e-3890.43Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQ+MQIMLVAFAVVAFLTGYVM SFR+M+LVYAGGV LTTLITVPNWPFFNRHPLKWLDP VAEKYPKPQPQEP V LKKKP KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

A0A6J1KDF1 probable signal peptidase complex subunit 17.5e-3891.49Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQ+MQIMLVAFAVVAFLTGYVM SFR+M+LVYA GV LTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEP VVLKKKP KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

SwissProt top hitse value%identityAlignment
B0FWK4 Signal peptidase complex subunit 12.2e-1041.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL   D    +K P
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Q3T134 Signal peptidase complex subunit 11.7e-1041.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQ+ Q +++  A+V F+ GY+   F   + +   G   + L+T+P WP + RHPLKWL   D S  +K P
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Q944J0 Probable signal peptidase complex subunit 11.2e-2769.15Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PK  P+  SV  KKK +KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

Q9D958 Signal peptidase complex subunit 12.9e-1044.78Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL
        MD++GQKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL

Q9Y6A9 Signal peptidase complex subunit 12.9e-1041.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL   + S  +K P
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Arabidopsis top hitse value%identityAlignment
AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12)8.2e-2969.15Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PK  P+  SV  KKK +KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12)8.2e-2969.15Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PK  P+  SV  KKK +KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK

AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12)8.2e-2969.15Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK
        MDWQGQKLAEQLMQI+L+  AVV+F+ GY   SFR+M+L+YAGGV LTTLIT+PNWP FNRH LKWLDPS AEK+PK  PQ   V  KKK + K
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTGGCAAGGGCAAAAGCTAGCGGAGCAGTTGATGCAGATTATGTTGGTTGCATTTGCCGTGGTGGCCTTTTTGACTGGCTATGTTATGGGATCGTTTCGGCTTAT
GATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACCGTTCCCAATTGGCCTTTCTTTAATCGTCACCCACTCAAGTGGTTGGATCCTAGCGTGGCTGAAA
AATACCCTAAGCCGCAACCGCAGGAGCCTTCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
CCTGAAAGCAATTGACATATCCTCTTTCCCTCCCGCTGATCATTCCCTTTCAACTACAACATCGTCGTCTCCAAATTCGCTTGCAGGATTTTCATTTCTTCAGGTGGCTA
GGGATTTTCATTTCTTCAGATGGACTGGCAAGGGCAAAAGCTAGCGGAGCAGTTGATGCAGATTATGTTGGTTGCATTTGCCGTGGTGGCCTTTTTGACTGGCTATGTTA
TGGGATCGTTTCGGCTTATGATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACCGTTCCCAATTGGCCTTTCTTTAATCGTCACCCACTCAAGTGGTTG
GATCCTAGCGTGGCTGAAAAATACCCTAAGCCGCAACCGCAGGAGCCTTCTGTGGTTTTGAAGAAGAAACCTGCTAAGAAGTAGGTCAGTTTAATTGACGTTGTTCTTGT
ATTAACATACAGTTCGAACCATTGAATTTCTTATGTCCCTAAAATGACGATACATACACTCGTTATATGGATTATAATTTTGAAGGTTTAGAGAATGACAGATCTCTTTG
ATGCCCTTGC
Protein sequenceShow/hide protein sequence
MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPSVVLKKKPAKK