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ClCG11G014780 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G014780
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionBEST Arabidopsis thaliana protein match is: NHL domain-containing protein .
Genome locationCG_Chr11:28054911..28055228
RNA-Seq ExpressionClCG11G014780
SyntenyClCG11G014780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5034444.1 hypothetical protein JHK87_009354 [Glycine soja]2.9e-0652.46Show/hide
Query:  MSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS
        +SCW RLK+K+                YDPLSYAQNFDEG    DEE  +R FSARYA PS
Subjt:  MSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS

KAG6591707.1 hypothetical protein SDJN03_14053, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0954.32Show/hide
Query:  MEKAEKQKSQEEIMSCWERLKMKI----------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKK
        +E  EK+KS +E MS W+ LK KI                 YD +SYAQNFD+GL NAD+EG  RSFSARYAV SKPP KK
Subjt:  MEKAEKQKSQEEIMSCWERLKMKI----------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKK

KAG6608120.1 hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sororia]3.7e-0950Show/hide
Query:  MEKAEKQKSQEEIMSCWERLKMKIL----------------------YDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAK
        MEK+E QKS EE++SCW RLK+K+L                      YD LSYAQNFDEGL + DEE   R FSARY   SKP  K
Subjt:  MEKAEKQKSQEEIMSCWERLKMKIL----------------------YDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAK

KAG7024589.1 hypothetical protein SDJN02_13407, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-0953.66Show/hide
Query:  MEKAEKQKSQEEIMSCWERLKMKI-----------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKK
        +E  EK+KS +E  S W+ LK KI                  YD +SYAQNFD+GLANAD+EG  RSFSARYAV SKPP KK
Subjt:  MEKAEKQKSQEEIMSCWERLKMKI-----------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKK

KGN60281.1 hypothetical protein Csa_002688 [Cucumis sativus]4.8e-1755.45Show/hide
Query:  MEKAEKQKSQEEIMSCWERLKMKIL-----------------------------------YDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKK
        M+KAEKQK++EE MSCWERL+MKIL                                   YD LSYA+NFDEGLANAD EG +RSFSARYAVPSKPPAKK
Subjt:  MEKAEKQKSQEEIMSCWERLKMKIL-----------------------------------YDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKK

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0LJR5 Uncharacterized protein2.3e-1755.45Show/hide
Query:  MEKAEKQKSQEEIMSCWERLKMKIL-----------------------------------YDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKK
        M+KAEKQK++EE MSCWERL+MKIL                                   YD LSYA+NFDEGLANAD EG +RSFSARYAVPSKPPAKK
Subjt:  MEKAEKQKSQEEIMSCWERLKMKIL-----------------------------------YDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKK

Query:  L
        L
Subjt:  L

A0A0B2RTQ8 Uncharacterized protein2.4e-0647.37Show/hide
Query:  MEKAE--KQKSQEEIMSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS
        MEK+   + K+    +SCW RLK+K+                YDPLSYAQNFDEG    DEE  +R FSARYA PS
Subjt:  MEKAE--KQKSQEEIMSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS

A0A445KYI8 Uncharacterized protein3.2e-0647.37Show/hide
Query:  MEKAEK--QKSQEEIMSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS
        MEK+     K+    +SCW RLK+K+                YDPLSYAQNFDEG    DEE  +R FSARYA PS
Subjt:  MEKAEK--QKSQEEIMSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS

K7K3E9 Uncharacterized protein2.4e-0647.37Show/hide
Query:  MEKAE--KQKSQEEIMSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS
        MEK+   + K+    +SCW RLK+K+                YDPLSYAQNFDEG    DEE  +R FSARYA PS
Subjt:  MEKAE--KQKSQEEIMSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS

K7KJ14 Uncharacterized protein3.2e-0647.37Show/hide
Query:  MEKAEK--QKSQEEIMSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS
        MEK+     K+    +SCW RLK+K+                YDPLSYAQNFDEG    DEE  +R FSARYA PS
Subjt:  MEKAEK--QKSQEEIMSCWERLKMKI---------------LYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)3.5e-0548.89Show/hide
Query:  KILYDPLSYAQNFDEG--LANADEEGPYRSFSARYAVPSKPPAKK
        K  YD LSY+ NFD+G    + D+E PYR +S R+A PS P + K
Subjt:  KILYDPLSYAQNFDEG--LANADEEGPYRSFSARYAVPSKPPAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGCAGAGAAACAGAAAAGCCAGGAAGAAATAATGTCGTGTTGGGAGCGTTTGAAGATGAAGATTTTATACGATCCATTAAGCTACGCTCAGAATTTCGACGA
GGGATTGGCTAATGCAGATGAAGAAGGACCCTATCGAAGTTTTTCTGCAAGATATGCTGTTCCTTCCAAACCGCCAGCAAAGAAGTTAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGCAGAGAAACAGAAAAGCCAGGAAGAAATAATGTCGTGTTGGGAGCGTTTGAAGATGAAGATTTTATACGATCCATTAAGCTACGCTCAGAATTTCGACGA
GGGATTGGCTAATGCAGATGAAGAAGGACCCTATCGAAGTTTTTCTGCAAGATATGCTGTTCCTTCCAAACCGCCAGCAAAGAAGTTAGAATAG
Protein sequenceShow/hide protein sequence
MEKAEKQKSQEEIMSCWERLKMKILYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKKLE