CuGenDBv2

Gene ID	ClCG11G014840
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Hydroxyproline-rich glycoprotein family protein, putative
Genome location	CG_Chr11:28147304..28148923
RNA-Seq Expression	ClCG11G014840
Synteny	ClCG11G014840
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR037699 - Uncharacterized protein At5g65660-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591711.1 hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-47

79.07

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE
        MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H HP IPP+T       K SPIHT IWKENRP+SL+VLMPGDE
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE

Query:  VPRFIAMACPPCTAAALVEIVVQKPSQSL
        VPRFIAMACPPC AA LVEIV+QKPSQS+
Subjt:  VPRFIAMACPPCTAAALVEIVVQKPSQSL

XP_008466113.1 PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo]

2.3e-52

81.16

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPP-------QTAHKISPIHTKIWKENRPQSLSVLMPG
        MEYDNRE   QDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDHL HHHHPPIPP           K SPIHT IWKENRPQS+SVLMPG
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPP-------QTAHKISPIHTKIWKENRPQSLSVLMPG

Query:  DEVPRFIAMACPPC--TAAALVEIVVQKPSQSLPNSSL
        DEVPRFIA+ACPPC   AAALVEIVVQKPSQS+ +SSL
Subjt:  DEVPRFIAMACPPC--TAAALVEIVVQKPSQSLPNSSL

XP_022936981.1 uncharacterized protein At5g65660-like [Cucurbita moschata]

1.0e-47

79.07

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE
        MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H HP IPP+T       K SPIHT IWKENRP+SL+VLMPGDE
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE

Query:  VPRFIAMACPPCTAAALVEIVVQKPSQSL
        VPRFIAMACPPC AA LVEIV+QKPSQS+
Subjt:  VPRFIAMACPPCTAAALVEIVVQKPSQSL

XP_023536259.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]

1.3e-47

79.07

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE
        MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H HP IPP+T       K SPIHT IWKENRP SL+VLMPGDE
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE

Query:  VPRFIAMACPPCTAAALVEIVVQKPSQSL
        VPRFIAMACPPC AA LVEIV+QKPSQS+
Subjt:  VPRFIAMACPPCTAAALVEIVVQKPSQSL

XP_038899315.1 uncharacterized protein At5g65660-like [Benincasa hispida]

5.2e-60

89.55

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQTA-----HKISPIHTKIWKENRPQSLSVLMPGDE
        MEYDNRE   QDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHL HHHHPPIPPQTA      KISPIHTKIW+ENRPQSLSVLMPGDE
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQTA-----HKISPIHTKIWKENRPQSLSVLMPGDE

Query:  VPRFIAMACPPCTAAALVEIVVQKPSQSLPNSSL
        VPRFIAMACPPC AAALVEIVVQKPSQS P+SSL
Subjt:  VPRFIAMACPPCTAAALVEIVVQKPSQSLPNSSL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CQS4 uncharacterized protein At5g65660-like

1.1e-52

81.16

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPP-------QTAHKISPIHTKIWKENRPQSLSVLMPG
        MEYDNRE   QDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDHL HHHHPPIPP           K SPIHT IWKENRPQS+SVLMPG
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPP-------QTAHKISPIHTKIWKENRPQSLSVLMPG

Query:  DEVPRFIAMACPPC--TAAALVEIVVQKPSQSLPNSSL
        DEVPRFIA+ACPPC   AAALVEIVVQKPSQS+ +SSL
Subjt:  DEVPRFIAMACPPC--TAAALVEIVVQKPSQSLPNSSL

A0A5D3E545 Uncharacterized protein

1.1e-52

81.16

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPP-------QTAHKISPIHTKIWKENRPQSLSVLMPG
        MEYDNRE   QDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDHL HHHHPPIPP           K SPIHT IWKENRPQS+SVLMPG
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPP-------QTAHKISPIHTKIWKENRPQSLSVLMPG

Query:  DEVPRFIAMACPPC--TAAALVEIVVQKPSQSLPNSSL
        DEVPRFIA+ACPPC   AAALVEIVVQKPSQS+ +SSL
Subjt:  DEVPRFIAMACPPC--TAAALVEIVVQKPSQSLPNSSL

A0A6J1CGJ4 uncharacterized protein At5g65660-like

1.7e-40

67.15

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQTA-----HKISPIHTKIWKENRPQSLSVLMPGDE
        M+YD+RE   QDPASLSFPVGLVLLLTF FCMCCFFSCCLHW+KLRSFLGCPD   H H PPIPP+ A      KI P+HT     N+ QSL V+MPGDE
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQTA-----HKISPIHTKIWKENRPQSLSVLMPGDE

Query:  VPRFIAMACPPCTAAA----LVEIVVQKPSQSLPNSS
         PRFIAMACPPC AA      V+++VQKP QS P+SS
Subjt:  VPRFIAMACPPCTAAA----LVEIVVQKPSQSLPNSS

A0A6J1F906 uncharacterized protein At5g65660-like

4.9e-48

79.07

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE
        MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H HP IPP+T       K SPIHT IWKENRP+SL+VLMPGDE
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE

Query:  VPRFIAMACPPCTAAALVEIVVQKPSQSL
        VPRFIAMACPPC AA LVEIV+QKPSQS+
Subjt:  VPRFIAMACPPCTAAALVEIVVQKPSQSL

A0A6J1IEI5 uncharacterized protein At5g65660-like

1.9e-47

79.07

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Query:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE
        MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H HP IPP+T       K SPIHT IWKENRP+SL+VLMPGDE
Subjt:  MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQT-----AHKISPIHTKIWKENRPQSLSVLMPGDE

Query:  VPRFIAMACPPCTAAALVEIVVQKPSQSL
        VPRFIAMACPPC AA LVEIV+QKPSQS+
Subjt:  VPRFIAMACPPCTAAALVEIVVQKPSQSL

SwissProt top hits

e value

%identity

Alignment

Q9LSK9 Uncharacterized protein At5g65660

4.8e-08

38.33

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Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFL-----GCPD-HLHHHHHPPIPPQTAHKISPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMACPP
        SL FP+G  LLL  +F +   FSCC HW+K RS       G P   +  + + P PP    K            +PQ+LS  VLMPGD  P+FIA+ CP 
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFL-----GCPD-HLHHHHHPPIPPQTAHKISPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMACPP

Query:  C-TAAALVEIVVQKPSQSLP
               + + VQ P QS P
Subjt:  C-TAAALVEIVVQKPSQSLP

Arabidopsis top hits

e value

%identity

Alignment

AT5G65660.1 hydroxyproline-rich glycoprotein family protein

3.4e-09

38.33

Show/hide

Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFL-----GCPD-HLHHHHHPPIPPQTAHKISPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMACPP
        SL FP+G  LLL  +F +   FSCC HW+K RS       G P   +  + + P PP    K            +PQ+LS  VLMPGD  P+FIA+ CP 
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFL-----GCPD-HLHHHHHPPIPPQTAHKISPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMACPP

Query:  C-TAAALVEIVVQKPSQSLP
               + + VQ P QS P
Subjt:  C-TAAALVEIVVQKPSQSLP

Sequences

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CDS sequence

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ATGGAGTATGATAATCGCGAAGGACTAGGACAGGATCCGGCGTCTCTAAGCTTTCCAGTTGGTTTAGTTCTTTTATTGACATTTTTGTTCTGCATGTGTTGTTTCTTTTC
TTGTTGTCTTCACTGGGAAAAGCTCCGATCATTTCTTGGTTGTCCCGATCATCTCCACCACCACCACCACCCTCCTATTCCGCCGCAAACCGCCCATAAAATTTCCCCAA
TCCATACGAAGATATGGAAGGAGAATCGGCCGCAAAGCTTGTCGGTGTTGATGCCCGGCGATGAGGTTCCAAGGTTTATAGCAATGGCATGTCCGCCGTGTACGGCGGCG
GCGTTGGTCGAAATTGTAGTACAAAAACCTTCACAGAGTCTTCCGAATTCTTCTCTATAG

mRNA sequence

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ATTTAATATATTTTGTCCATAAATTTATTAAATCGTTGGCTGTGGGCATAGGCAAAGAAAGTAAAAATGGAGTATGATAATCGCGAAGGACTAGGACAGGATCCGGCGTC
TCTAAGCTTTCCAGTTGGTTTAGTTCTTTTATTGACATTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTGTCTTCACTGGGAAAAGCTCCGATCATTTCTTGGTTGTC
CCGATCATCTCCACCACCACCACCACCCTCCTATTCCGCCGCAAACCGCCCATAAAATTTCCCCAATCCATACGAAGATATGGAAGGAGAATCGGCCGCAAAGCTTGTCG
GTGTTGATGCCCGGCGATGAGGTTCCAAGGTTTATAGCAATGGCATGTCCGCCGTGTACGGCGGCGGCGTTGGTCGAAATTGTAGTACAAAAACCTTCACAGAGTCTTCC
GAATTCTTCTCTATAGCTCTCTCTTTAATTAATTAATGCTTTTTTTTTTTGTAAGCTTTTTGCGCGTATATGATTGTAATATTTATATATATGTGCATTTGAATATTCCA
TTATTTCTTTGGAATTTCTAGCAATGTTCAAATGTTTATGTTTGTTTTGTGAGTTCGTCACTTTAATTTTATTCCTTTTCCG

Protein sequence

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MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLHHHHHPPIPPQTAHKISPIHTKIWKENRPQSLSVLMPGDEVPRFIAMACPPCTAA
ALVEIVVQKPSQSLPNSSL

ClCG11G014840 (gene) of Watermelon (Charleston Gray) v2.5 genome