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ClCG11G015010 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G015010
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGATA zinc finger domain-containing protein
Genome locationCG_Chr11:28332732..28334029
RNA-Seq ExpressionClCG11G015010
SyntenyClCG11G015010
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466088.1 PREDICTED: uncharacterized protein LOC103503615 isoform X2 [Cucumis melo]1.5e-2370.59Show/hide
Query:  KQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKAC
        KQQIP SFSLELKRDLT  VEKQS KLLDTEKLIFKTEGM LQ DQVD HVLVTVKSEGVVAI   ++         S++   F  VCDELLIGIP KA 
Subjt:  KQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKAC

Query:  GV
        GV
Subjt:  GV

XP_031737616.1 uncharacterized protein LOC101222383 isoform X2 [Cucumis sativus]5.1e-2469.81Show/hide
Query:  LIQGKQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIP
        LI GKQQIP SFSLELKRDLT  VEKQS KLLDTEKLIFKTEGM L+ DQVD HVLVTVKSEGVVAI           S   M    +  VCDELLIGIP
Subjt:  LIQGKQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIP

Query:  QKACGV
         KA GV
Subjt:  QKACGV

XP_038892686.1 uncharacterized protein LOC120081684 isoform X1 [Benincasa hispida]2.8e-2270.71Show/hide
Query:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        IP SFSLELKRDLT LVEKQS KLLDTEKL+FKTEGMNL  DQVDTHVLVTVKSEGVVAI   ++         S+I   F   CDELLIGIP KA GV
Subjt:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV

XP_038892690.1 uncharacterized protein LOC120081684 isoform X2 [Benincasa hispida]2.1e-2571.7Show/hide
Query:  LIQGKQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIP
        LI GKQQIP SFSLELKRDLT LVEKQS KLLDTEKL+FKTEGMNL  DQVDTHVLVTVKSEGVVAI   ++         S+I   F   CDELLIGIP
Subjt:  LIQGKQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIP

Query:  QKACGV
         KA GV
Subjt:  QKACGV

XP_038892695.1 uncharacterized protein LOC120081684 isoform X3 [Benincasa hispida]2.8e-2270.71Show/hide
Query:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        IP SFSLELKRDLT LVEKQS KLLDTEKL+FKTEGMNL  DQVDTHVLVTVKSEGVVAI   ++         S+I   F   CDELLIGIP KA GV
Subjt:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV

TrEMBL top hitse value%identityAlignment
A0A0A0LEU4 Uncharacterized protein1.1e-2154.93Show/hide
Query:  MDSHLYHLLCVKISYPDFVCVFCSLKVEFFKLSLVCLIQGKQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGV
        M S LYHL  +K   PD   ++  +K+ +              IP SFSLELKRDLT  VEKQS KLLDTEKLIFKTEGM L+ DQVD HVLVTVKSEGV
Subjt:  MDSHLYHLLCVKISYPDFVCVFCSLKVEFFKLSLVCLIQGKQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGV

Query:  VAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        VAI           S   M    +  VCDELLIGIP KA GV
Subjt:  VAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV

A0A1S3CQF3 uncharacterized protein LOC103503615 isoform X27.2e-2470.59Show/hide
Query:  KQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKAC
        KQQIP SFSLELKRDLT  VEKQS KLLDTEKLIFKTEGM LQ DQVD HVLVTVKSEGVVAI   ++         S++   F  VCDELLIGIP KA 
Subjt:  KQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKAC

Query:  GV
        GV
Subjt:  GV

A0A1S3CRU2 uncharacterized protein LOC103503615 isoform X15.1e-2269.7Show/hide
Query:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        IP SFSLELKRDLT  VEKQS KLLDTEKLIFKTEGM LQ DQVD HVLVTVKSEGVVAI   ++         S++   F  VCDELLIGIP KA GV
Subjt:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV

A0A1S4E5J1 uncharacterized protein LOC103503615 isoform X35.1e-2269.7Show/hide
Query:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        IP SFSLELKRDLT  VEKQS KLLDTEKLIFKTEGM LQ DQVD HVLVTVKSEGVVAI   ++         S++   F  VCDELLIGIP KA GV
Subjt:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV

A0A5D3E5W6 Putative transmembrane protein5.1e-2269.7Show/hide
Query:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        IP SFSLELKRDLT  VEKQS KLLDTEKLIFKTEGM LQ DQVD HVLVTVKSEGVVAI   ++         S++   F  VCDELLIGIP KA GV
Subjt:  IPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20890.1 unknown protein6.0e-0740Show/hide
Query:  IPTSFSLE-LKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        IP  FSL+ LK  +  L      +LL+TEKLIFKTE +    ++   +VLVTV+ EG+VAI   K+         S+I   +  VC+E L+GIP  +  V
Subjt:  IPTSFSLE-LKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV

AT1G76480.1 unknown protein9.6e-0535Show/hide
Query:  IPTSFSLE-LKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        IP   SL+ LK     L   Q  +LL+TEKLIFK E +    ++   +VLVT++ EG+VAI   ++               +  VC+E L+GIP  +  V
Subjt:  IPTSFSLE-LKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV

AT1G76480.2 unknown protein9.6e-0535Show/hide
Query:  IPTSFSLE-LKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV
        IP   SL+ LK     L   Q  +LL+TEKLIFK E +    ++   +VLVT++ EG+VAI   ++               +  VC+E L+GIP  +  V
Subjt:  IPTSFSLE-LKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGTTSNISFVSMILSGFVTVCDELLIGIPQKACGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTCACTTGTATCATCTTCTATGTGTGAAGATATCATATCCTGACTTTGTTTGTGTTTTCTGTTCTCTGAAAGTTGAATTCTTTAAACTTTCCTTAGTTTGTCT
CATTCAAGGGAAACAACAAATACCTACCAGCTTCTCGTTGGAGCTAAAGAGAGACTTGACATGCCTTGTTGAGAAGCAGAGCACAAAGCTACTTGACACTGAAAAGCTTA
TTTTTAAGACAGAAGGCATGAACTTGCAGCGAGATCAAGTTGATACACATGTATTGGTCACTGTGAAATCCGAGGGAGTTGTTGCCATAACATTGTGCAAGAAAGGGACA
ACATCTAACATCTCATTCGTTAGTATGATACTTTCTGGCTTTGTGACAGTTTGTGACGAGCTACTTATCGGCATCCCACAAAAGGCTTGTGGGGTT
mRNA sequenceShow/hide mRNA sequence
AGTCGAGAGTAAAATTTTAAATGTTGGAGAGGAGATAGGGAGGGAAACATCACCTTTACAAATGGATTCTCACTTGTATCATCTTCTATGTGTGAAGATATCATATCCTG
ACTTTGTTTGTGTTTTCTGTTCTCTGAAAGTTGAATTCTTTAAACTTTCCTTAGTTTGTCTCATTCAAGGGAAACAACAAATACCTACCAGCTTCTCGTTGGAGCTAAAG
AGAGACTTGACATGCCTTGTTGAGAAGCAGAGCACAAAGCTACTTGACACTGAAAAGCTTATTTTTAAGACAGAAGGCATGAACTTGCAGCGAGATCAAGTTGATACACA
TGTATTGGTCACTGTGAAATCCGAGGGAGTTGTTGCCATAACATTGTGCAAGAAAGGGACAACATCTAACATCTCATTCGTTAGTATGATACTTTCTGGCTTTGTGACAG
TTTGTGACGAGCTACTTATCGGCATCCCACAAAAGGCTTGTGGGGTT
Protein sequenceShow/hide protein sequence
MDSHLYHLLCVKISYPDFVCVFCSLKVEFFKLSLVCLIQGKQQIPTSFSLELKRDLTCLVEKQSTKLLDTEKLIFKTEGMNLQRDQVDTHVLVTVKSEGVVAITLCKKGT
TSNISFVSMILSGFVTVCDELLIGIPQKACGV