; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG11G015980 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G015980
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionplastid transcriptionally active 6
Genome locationCG_Chr11:29306646..29308930
RNA-Seq ExpressionClCG11G015980
SyntenyClCG11G015980
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]1.2e-18196.42Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TI+RLRA SISA++SLPHLPSLPYRKSTPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.5e-17995.55Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AA
        MNSTVFLLS+PLPPATIHRLR PSISA+SSL HLPSLPYRKSTPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AA

Query:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+ DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]6.3e-18396.43Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TI+RLRA SISA++SLPHLPSLPYRKSTPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]6.5e-18094.64Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS+PLPP TI+RLR  SIS+++SLPHLPSLPY K+TP A  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]1.6e-18196.13Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+S+PL PATI+RLRA SISA+SSLPHLPSLPYRKSTPS   LF PR+NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876133.1e-18396.43Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TI+RLRA SISA++SLPHLPSLPYRKSTPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW

A0A5A7UA32 Uncharacterized protein5.8e-18296.42Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TI+RLRA SISA++SLPHLPSLPYRKSTPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN

A0A5J5BWI0 Uncharacterized protein1.9e-14075.6Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        M +T+ L   PL P      + P ++  +SL   P+L +    P    +F PR + FRV++DDGD D GGPDDYDMD+EE+EEVDNKKD+D+EYDPLAAA
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AA+A G  G GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YAIP+VLAP+PQKYIRCA+
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNRR+ DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR+RDR+ DLLV+RDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
        +R+DPTTVIE+EEW KTRQDMERHLRKLRDFS+SNW
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW

A0A6J1F6A7 uncharacterized protein LOC1114425726.6e-17894.69Show/hide
Query:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---
        MNSTVFLLS+PLPPATIHRLR PSISA+SSL HLPSL YRKSTPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---

Query:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+ DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW

A0A6J1IGR4 uncharacterized protein LOC1114770761.3e-17894.72Show/hide
Query:  MNSTVFLLST--PLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-
        MNSTVFLLS+  PLPPATIHRLR PSISA+SSLPHLPSLPYRKSTPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L 
Subjt:  MNSTVFLLST--PLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-

Query:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
          AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+ DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNW

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic3.7e-13374.69Show/hide
Query:  APSISASS--SLPHLPS------LPYRKSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRKSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNW
        EWTKTR+DME+HLRKLRDFS+SNW
Subjt:  EWTKTRQDMERHLRKLRDFSISNW

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 62.6e-13474.69Show/hide
Query:  APSISASS--SLPHLPS------LPYRKSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRKSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNW
        EWTKTR+DME+HLRKLRDFS+SNW
Subjt:  EWTKTRQDMERHLRKLRDFSISNW

AT1G21600.2 plastid transcriptionally active 62.6e-13474.69Show/hide
Query:  APSISASS--SLPHLPS------LPYRKSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRKSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNW
        EWTKTR+DME+HLRKLRDFS+SNW
Subjt:  EWTKTRQDMERHLRKLRDFSISNW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGTCTTCCTCCTCTCCACGCCCTTGCCGCCGGCCACAATCCACCGGCTCCGAGCCCCCTCCATATCCGCCTCAAGCTCTCTACCCCACCTCCCGAGCTT
GCCCTACCGGAAATCCACTCCCTCTGCTCCCACTCTCTTCGTCCCTAGAAAAAACCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGTGGCCCTGACGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAGAAGGATTTTGACATCGAGTACGATCCTCTAGCCGCGGCCGCAGCTGCAGCAGCGGGTTCCGACGGCGTT
GGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACGCAGGGGTGGGATTCGGAGATGATTGTGGATTATAGGATAAACGAGGAGGAATTTCATAAGAT
TAGTTTGCTGCACTGTGATTTCTTCATCAGGAAGCCGCCGGATCCCGACAACGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCAGACACTGATGTCTATGCGA
TCCCTAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAAAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTA
TACAAGTCCGAGAAGGAGGTTCTTAAGGTTTTCTTGACGAAGCACTTCAGAAACCGAAGGGTGCGCGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAGTCAATCACCAGGGCAAAAGTCTTGGTCACGGTTCCAGGTGGAAGAGATAGGGACAGGAGAAGCGACTTACTCGTAGTTCGGGATAATGGGAACTCTT
TCAAGATCATCCATTCGAGTGAACGAGATGATCCGACCACGGTGATAGAGAAAGAAGAATGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGAC
TTCAGCATTTCAAATTGGACAGGAAATATGGTTTCAAAATTTAGCATCGGTGAAAATGAGACACCCAACTTACCCATCACGATGATTCTCTCGTGCGAGTTCTCGACATA
TCTCCTGCCCATGCTCTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCACCGTCTTCCTCCTCTCCACGCCCTTGCCGCCGGCCACAATCCACCGGCTCCGAGCCCCCTCCATATCCGCCTCAAGCTCTCTACCCCACCTCCCGAGCTT
GCCCTACCGGAAATCCACTCCCTCTGCTCCCACTCTCTTCGTCCCTAGAAAAAACCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGTGGCCCTGACGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAGAAGGATTTTGACATCGAGTACGATCCTCTAGCCGCGGCCGCAGCTGCAGCAGCGGGTTCCGACGGCGTT
GGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACGCAGGGGTGGGATTCGGAGATGATTGTGGATTATAGGATAAACGAGGAGGAATTTCATAAGAT
TAGTTTGCTGCACTGTGATTTCTTCATCAGGAAGCCGCCGGATCCCGACAACGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCAGACACTGATGTCTATGCGA
TCCCTAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAAAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTA
TACAAGTCCGAGAAGGAGGTTCTTAAGGTTTTCTTGACGAAGCACTTCAGAAACCGAAGGGTGCGCGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAGTCAATCACCAGGGCAAAAGTCTTGGTCACGGTTCCAGGTGGAAGAGATAGGGACAGGAGAAGCGACTTACTCGTAGTTCGGGATAATGGGAACTCTT
TCAAGATCATCCATTCGAGTGAACGAGATGATCCGACCACGGTGATAGAGAAAGAAGAATGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGAC
TTCAGCATTTCAAATTGGACAGGAAATATGGTTTCAAAATTTAGCATCGGTGAAAATGAGACACCCAACTTACCCATCACGATGATTCTCTCGTGCGAGTTCTCGACATA
TCTCCTGCCCATGCTCTCGTGA
Protein sequenceShow/hide protein sequence
MNSTVFLLSTPLPPATIHRLRAPSISASSSLPHLPSLPYRKSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGV
GDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPL
YKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRD
FSISNWTGNMVSKFSIGENETPNLPITMILSCEFSTYLLPMLS