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ClCG11G016410 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G016410
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionAuxin-responsive family protein
Genome locationCG_Chr11:29673594..29674061
RNA-Seq ExpressionClCG11G016410
SyntenyClCG11G016410
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5576.88Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFD-----NIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALID
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCER +EE E+ +       H++++  E+VSG+NVI+YVGSTRKRY ISSKYL+HPLLNALID
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFD-----NIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALID

Query:  KSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KSK  K    NED DDDD  CISVRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  KSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_008444291.1 PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]1.7e-5780.12Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE+   +EEDF     +QQ  +KVSG NNV+LYVGSTRK+YAI+SKYL HPLLNALIDKSKS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS

Query:  KKLANDNEDE-----DDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KKL +D++DE     D DD+DCI VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  KKLANDNEDE-----DDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]4.1e-5981.01Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE+   +EEDF     +QQ  +KVSG+NVILYVGSTRK+YAI+SKYL+HPLLNALIDKSKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK

Query:  KLANDNEDEDD---DDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KL +D++D+DD   DD++CI VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  KLANDNEDEDD---DDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]7.2e-5677.07Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQ--LEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVC+R +EE E+ +   ++++    EKVSG+NVI+YVGSTRKRYAISSKYL+HPLLNALIDKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQ--LEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK

Query:  SKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
          K  N     +DDDD+CISVRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  SKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]1.7e-6085.9Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK
        MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVC  K+ EEEDF+   QQ+QQLEKVSGN+VILYVGSTRKRYAISSKYL+HPLLNALIDKSKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK

Query:  K-LANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        K LAND    DD+++DCISVRCEVVLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Subjt:  K-LANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

TrEMBL top hitse value%identityAlignment
A0A1S3B9J9 uncharacterized protein LOC1034876598.3e-5880.12Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE+   +EEDF     +QQ  +KVSG NNV+LYVGSTRK+YAI+SKYL HPLLNALIDKSKS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS

Query:  KKLANDNEDE-----DDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KKL +D++DE     D DD+DCI VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  KKLANDNEDE-----DDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

A0A6J1C0S4 uncharacterized protein LOC1110073983.3e-5476.92Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVW-VCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+W +C  K+EEEE+ +  H QQQQLEKV G+NVI+YVGSTRK+Y ISSK+L+HPL+NALIDKSKS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVW-VCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS

Query:  KKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        K  +        +D + ISVRCEVVLFDHLLWMLENSDPNITFDSNLEELA+LYVF
Subjt:  KKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

B9RI47 Uncharacterized protein5.2e-3661.94Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE++W  + K E+EE     HQ              L+VGSTRKRY ISSKYL+HPL+NALI KSK +
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK

Query:  KLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        +            ++ + V+CEVVLFDHLLWMLEN+DPN++FDS LEELAELYVF
Subjt:  KLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

M5WKH8 Uncharacterized protein1.5e-3560.9Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK
        MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTRED+WV     ++  + D+ H Q            I++VGSTRKRY ISSKYL HPLLNALIDKS  +
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK

Query:  KLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLEN-SDPNITFDSNLEELAELYVF
        K   + ED        I V CEVVLFDHL+WMLEN +DP+     +LEELA LYVF
Subjt:  KLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLEN-SDPNITFDSNLEELAELYVF

W9S1R7 Uncharacterized protein6.8e-3655.97Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK
        MKKINS+LRKCKSLSRQL RSSSYS+LRSKS+R+D WV           D+  QQQ QL++    +  ++VGS +KRY IS+K+L+HPLL ALIDKS+ K
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSK

Query:  KLANDNEDEDD----DDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
          + DN +  D    ++++ + V+CEVVLFDHLLWMLEN+DP      +LEELA LYVF
Subjt:  KLANDNEDEDD----DDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR764.0e-0941.18Show/hide
Query:  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY
        +YVG TR+ Y +SS  ++HPL   L             +     +D  ISV CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY

Q9C9E1 Auxin-responsive protein SAUR781.5e-1140.22Show/hide
Query:  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        NN+ ++YVG TR+ Y +    ++HPL   L+D+S S+ +  D E         I V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

Q9LQI6 Auxin-responsive protein SAUR772.8e-1039.78Show/hide
Query:  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF
        ++YVG +R+ Y +SS  + HPL   L+D+S           E+  D + + V CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family2.0e-1139.78Show/hide
Query:  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF
        ++YVG +R+ Y +SS  + HPL   L+D+S           E+  D + + V CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF

AT1G72430.1 SAUR-like auxin-responsive protein family1.0e-1240.22Show/hide
Query:  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        NN+ ++YVG TR+ Y +    ++HPL   L+D+S S+ +  D E         I V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

AT3G12955.1 SAUR-like auxin-responsive protein family1.6e-2142.48Show/hide
Query:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKL
        ++  +LR+CKS+S QLGRS SY+SLRSKS R D                 H Q             + VG T+K Y IS K+L HPLLNAL++K +    
Subjt:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKL

Query:  ANDNEDEDDDDDDC-ISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV
            E++D++D  C I+V+CEVVLFDHLLWMLE  D  +    +L++ A LY+
Subjt:  ANDNEDEDDDDDDC-ISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV

AT5G20810.1 SAUR-like auxin-responsive protein family3.0e-0428.26Show/hide
Query:  QQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSN
        Q  +    V   N+ +YVG   +R+ I + YL+H L   L++K++        E+   D    +++ CEV  F +LL  +EN+  ++  D N
Subjt:  QQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSN

AT5G20820.1 SAUR-like auxin-responsive protein family2.8e-1041.18Show/hide
Query:  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY
        +YVG TR+ Y +SS  ++HPL   L             +     +D  ISV CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDEDDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAACTGGGGAGATCCTCTTCTTATAGCAGCTTGAGATCAAAATCCACAAGGGAAGATGTTTG
GGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGATTTTGATAATATTCATCAACAGCAGCAGCAACTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGGAGCA
CAAGGAAGAGATATGCAATAAGTTCAAAATATTTGACCCATCCTTTGCTAAATGCTCTTATTGACAAATCAAAGTCTAAGAAATTAGCTAATGATAATGAAGATGAAGAT
GATGATGATGATGATTGCATTTCAGTGAGATGTGAAGTTGTTCTATTTGACCATCTTTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTTGGA
GGAATTGGCTGAGCTTTATGTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAACTGGGGAGATCCTCTTCTTATAGCAGCTTGAGATCAAAATCCACAAGGGAAGATGTTTG
GGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGATTTTGATAATATTCATCAACAGCAGCAGCAACTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGGAGCA
CAAGGAAGAGATATGCAATAAGTTCAAAATATTTGACCCATCCTTTGCTAAATGCTCTTATTGACAAATCAAAGTCTAAGAAATTAGCTAATGATAATGAAGATGAAGAT
GATGATGATGATGATTGCATTTCAGTGAGATGTGAAGTTGTTCTATTTGACCATCTTTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTTGGA
GGAATTGGCTGAGCTTTATGTTTTTTGA
Protein sequenceShow/hide protein sequence
MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDNEDED
DDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF