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ClCG11G016780 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G016780
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCYSTM domain-containing protein
Genome locationCG_Chr11:30078131..30079634
RNA-Seq ExpressionClCG11G016780
SyntenyClCG11G016780
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3953656.1 hypothetical protein CMV_020922 [Castanea mollissima]4.1e-2275Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P ETKSRG+GFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

KAF3972548.1 hypothetical protein CMV_003960 [Castanea mollissima]1.4e-2276.39Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

KAG6591814.1 hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2993.06Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS QPA VYPPPST+PTSYAAPPPAGYP RDGGDFS QPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_022137938.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]2.9e-2890.28Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA VYPPPST P SYAAPPPAGYP RDGGDFS QP PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_031739667.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus]3.0e-2587.84Show/hide
Query:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGV YPPP STVPTSY+APPPAGYP R+GGDFS    PVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0L4C6 CYSTM domain-containing protein1.5e-2587.84Show/hide
Query:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGV YPPP STVPTSY+APPPAGYP R+GGDFS    PVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A6J1CBQ4 cysteine-rich and transmembrane domain-containing protein WIH2-like1.4e-2890.28Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA VYPPPST P SYAAPPPAGYP RDGGDFS QP PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2LG73 CYSTM domain-containing protein1.5e-2275Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P ETKSRGDGFWKGCCAALCCCCV+DACF
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2LJ98 CYSTM domain-containing protein1.3e-2173.61Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPST PT Y A PPAGYP +DG  +SQ P P P ETKSRGDGFWKGCCAALCCCC LD CF
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2R3F7 CYSTM domain-containing protein1.2e-2276.39Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA  YPPPSTVP  Y APPPAGYP +DG  + Q P P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

SwissProt top hitse value%identityAlignment
Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH21.8e-0439.47Show/hide
Query:  PAGVYPPPSTVPTSYAAP--PPAGYPMRDGGD-------FSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        P   YPP    P  Y     PP GYP +             Q P P   + +    GF +GC AALCCCC+LDACF
Subjt:  PAGVYPPPSTVPTSYAAP--PPAGYPMRDGGD-------FSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

Arabidopsis top hitse value%identityAlignment
AT1G05340.1 unknown protein2.3e-1052.94Show/hide
Query:  QPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        Q AG  PPP  + T  + PPP GYP       S     V  ETKS+GDGF+KGC AA+CCCC LD CF
Subjt:  QPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32190.1 unknown protein6.3e-1353.52Show/hide
Query:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G YP P      Y  PPP GYP  D           P ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32200.1 unknown protein5.6e-0949.32Show/hide
Query:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRG---DGFWKGCCAALCCCCVLDAC
        S  Q AG YP P      Y APPP GYP  D    +      P ETKS+G   DGF KGC A +  CCVLDAC
Subjt:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRG---DGFWKGCCAALCCCCVLDAC

AT2G32210.1 unknown protein4.9e-1353.52Show/hide
Query:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G YP P      Y APPP GYP  D    +        ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22240.1 unknown protein1.2e-1460.61Show/hide
Query:  VYPPPSTVPTSYAAPPPAGYPMRDG--GDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        V  P  T    Y +PPP GYP RD   GD    P     ETKS+GDGFWKGCCAA+CCCCVLDACF
Subjt:  VYPPPSTVPTSYAAPPPAGYPMRDG--GDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTC
TCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
AGCACCTACTTTCTTTGTCTTCATATTCTCTCTTCCTTTCACGCGGTTTCGCCGCCCTTGGTCGGCCCCTCTCCCACACCACTCTCTCCGCCGCCTCCAAATCTCTCCCC
ACGTATATATATATACACACAATATCCACTCTTTCTCAAAGCATCAAACTTAAAGAAGAAAAAAAAAAAAAAAGGAATTATTTCTGAATTTCCTTTTCTCTTCTCTCAAG
ACTTGAATTTTTAATTTTTATTTCATCTCTCTGATCTCTTGTAAACATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAG
CCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGT
TGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAATCACTACAAGTTCAGACAACAAATTCTTAGAGATGATCGATATATCAGCAGACTCATTGTCATTT
TAGTGTTTTAATTTTAACTTTTCCTCCTCTTTTTTTTTTTTTTTCTCTTTTTCTTTTTAGTTTTCTAATTTTGTGAATTTTTGGATTAATTATGTGATGATGTTGTTCTA
ATAAATTTGGTTGGACTTCTGTGATCATA
Protein sequenceShow/hide protein sequence
MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF