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ClCG11G017970 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G017970
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr11:31125370..31126470
RNA-Seq ExpressionClCG11G017970
SyntenyClCG11G017970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066826.1 putative chilling-induced protein [Cucumis melo var. makuwa]1.4e-0479.41Show/hide
Query:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDM
        D TKGT EK KDTVI EANENVM TTEYRS+E+M
Subjt:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDM
XP_004146059.1 uncharacterized protein LOC101215612 [Cucumis sativus]1.8e-0471.05Show/hide
Query:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDMGNDQ
        D TKGTAEK KDTVI EANENV+ TTEYRS+E+M + +
Subjt:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDMGNDQ
XP_038899913.1 uncharacterized protein LOC120087104 [Benincasa hispida]2.4e-0473.68Show/hide
Query:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDMGNDQ
        D TKGTAEK KDT I EANENV+ T EYRS+ DMGN Q
Subjt:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDMGNDQ
TrEMBL top hitse value%identityAlignment
A0A0A0L055 Uncharacterized protein8.8e-0571.05Show/hide
Query:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDMGNDQ
        D TKGTAEK KDTVI EANENV+ TTEYRS+E+M + +
Subjt:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDMGNDQ
A0A5D3DWB9 Putative chilling-induced protein6.7e-0579.41Show/hide
Query:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDM
        D TKGT EK KDTVI EANENVM TTEYRS+E+M
Subjt:  DVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCGCTGCCGCCGCTGCCGCCGCTAACCGACTCCATGAGCTGGCAGCAGAGACGATTAGAGGAGGCAAGGTGGAGTTGGCCTATGATCGATGTGACGAAA
GGAACAGCGGAGAAGGCGAAGGACACAGTAATCGTGGAGGCAAATGAAAATGTGATGCACACTACTGAGTATAGAAGCATCGAGGATATGGGTAACGATCAAACA
TCTCATTCTGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCGCTGCCGCCGCTGCCGCCGCTAACCGACTCCATGAGCTGGCAGCAGAGACGATTAGAGGAGGCAAGGTGGAGTTGGCCTATGATCGATGTGACGAAA
GGAACAGCGGAGAAGGCGAAGGACACAGTAATCGTGGAGGCAAATGAAAATGTGATGCACACTACTGAGTATAGAAGCATCGAGGATATGGGTAACGATCAAACA
TCTCATTCTGATTTTTGA
Protein sequenceShow/hide protein sequence
MPPLPPLPPLTDSMSWQQRRLEEARWSWPMIDVTKGTAEKAKDTVIVEANENVMHTTEYRSIEDMGNDQTSHSDF