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ClCG11G018115 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG11G018115
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRING-type domain-containing protein
Genome locationCG_Chr11:31275679..31276152
RNA-Seq ExpressionClCG11G018115
SyntenyClCG11G018115
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064334.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]3.8e-7389.31Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSG G  DVEA M EERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

XP_008453063.1 PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo]3.8e-7389.31Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSG G  DVEA M EERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

XP_022936829.1 RING-H2 finger protein ATL39-like [Cucurbita moschata]4.9e-6885.44Show/hide
Query:  MADPLLTLLFPMETMVPESPSPP-VVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSE
        MADPLLTLLFPMETMV ES SPP VVHYTVTLDLRTS+IFS +IILFFLFL+HVLSGFLQWFL    SG   GDVEAGMGEERR+RR EK+P  VRFGSE
Subjt:  MADPLLTLLFPMETMVPESPSPP-VVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPECNHFFHSDCIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

XP_022976597.1 RING-H2 finger protein ATL39-like [Cucurbita maxima]2.2e-6886.08Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPV-VHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSE
        MADPLLTLLFPMETMV ES SPPV VHYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQWFL    SG   GDVEAGMGEERR+RR EK+P  VRFGSE
Subjt:  MADPLLTLLFPMETMVPESPSPPV-VHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPECNHFFHSDCIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

XP_031740449.1 RING-H2 finger protein ATL39-like [Cucumis sativus]9.1e-7590.57Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPESPSPPV+HYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRR+G G  DVEA M EERRL+R EK  LPPTVRFGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFL GENCQALPECNHFFHS+CIDVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

TrEMBL top hitse value%identityAlignment
A0A0A0L062 RING-type domain-containing protein4.4e-7590.57Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPESPSPPV+HYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRR+G G  DVEA M EERRL+R EK  LPPTVRFGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFL GENCQALPECNHFFHS+CIDVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

A0A1S3BVC7 RING-H2 finger protein ATL39-like1.9e-7389.31Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSG G  DVEA M EERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

A0A5A7VAT0 RING-H2 finger protein ATL39-like1.9e-7389.31Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSG G  DVEA M EERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

A0A5D3D9M0 RING-H2 finger protein ATL39-like1.9e-7389.31Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSG G  DVEA M EERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

A0A6J1IG67 RING-H2 finger protein ATL39-like1.1e-6886.08Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPV-VHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSE
        MADPLLTLLFPMETMV ES SPPV VHYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQWFL    SG   GDVEAGMGEERR+RR EK+P  VRFGSE
Subjt:  MADPLLTLLFPMETMVPESPSPPV-VHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPECNHFFHSDCIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL103.9e-1255.1Show/hide
Query:  EEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        +EEC ICL +F++GE  + LP+CNH FH  CID W  +  TCP CRNC+
Subjt:  EEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

P0C035 RING-H2 finger protein ATL605.1e-1253.06Show/hide
Query:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        ECA+CL + + G+  + LP CNH FH DCID+WF    TCP+CRN V +
Subjt:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

Q9LRB7 E3 ubiquitin-protein ligase EL51.5e-1141.05Show/hide
Query:  RRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSEKMVRRRSEE-------ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICR
        RRSG G GD   G G +  + R   LP TV   S      + EE       ECA+CL E   GE  + LP C H FH++C+D+W     TCP+CR
Subjt:  RRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSEKMVRRRSEE-------ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICR

Q9LS99 RING-H2 finger protein ATL776.7e-1256.25Show/hide
Query:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EEC ICL +F+AGE  + LP+CNH FH  CID W ++  TCP CR+C+
Subjt:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

Q9XF63 RING-H2 finger protein ATL36.7e-1257.45Show/hide
Query:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EC+ICL E + G+  + LP+CNH FH +CID+WF    TCPICRN V
Subjt:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

Arabidopsis top hitse value%identityAlignment
AT1G49210.1 RING/U-box superfamily protein3.1e-1254.17Show/hide
Query:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EEC ICL +F++GE  + LP+CNH FH  CID W     TCP CR+C+
Subjt:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

AT1G49220.1 RING/U-box superfamily protein2.8e-1355.1Show/hide
Query:  EEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        +EEC ICL +F++GE  + LP+CNH FH  CID W  +  TCP CRNC+
Subjt:  EEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

AT1G53820.1 RING/U-box superfamily protein3.6e-1353.06Show/hide
Query:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        ECA+CL + + G+  + LP CNH FH DCID+WF    TCP+CRN V +
Subjt:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

AT1G72310.1 RING/U-box superfamily protein4.8e-1357.45Show/hide
Query:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EC+ICL E + G+  + LP+CNH FH +CID+WF    TCPICRN V
Subjt:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

AT3G18773.1 RING/U-box superfamily protein4.8e-1356.25Show/hide
Query:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EEC ICL +F+AGE  + LP+CNH FH  CID W ++  TCP CR+C+
Subjt:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATCCATTACTGACACTCCTCTTCCCCATGGAAACCATGGTCCCTGAATCTCCATCTCCCCCAGTCGTCCACTACACCGTAACCCTCGATCTTCGAACCTCCAT
TATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGCAGCGGAGAAGGCGCCGGAGACG
TGGAGGCGGGAATGGGGGAGGAGCGGCGGTTGAGGCGGCCGGAGAAACTGCCGCCGACGGTGAGGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGCGAGGAGGAATGT
GCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAACTGCCAGGCGTTGCCGGAGTGTAACCATTTTTTTCATTCCGATTGTATTGATGTTTGGTTTAGCAAGAAATTTAC
GTGCCCAATCTGTCGTAATTGTGTTGCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATCCATTACTGACACTCCTCTTCCCCATGGAAACCATGGTCCCTGAATCTCCATCTCCCCCAGTCGTCCACTACACCGTAACCCTCGATCTTCGAACCTCCAT
TATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGCAGCGGAGAAGGCGCCGGAGACG
TGGAGGCGGGAATGGGGGAGGAGCGGCGGTTGAGGCGGCCGGAGAAACTGCCGCCGACGGTGAGGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGCGAGGAGGAATGT
GCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAACTGCCAGGCGTTGCCGGAGTGTAACCATTTTTTTCATTCCGATTGTATTGATGTTTGGTTTAGCAAGAAATTTAC
GTGCCCAATCTGTCGTAATTGTGTTGCAGCTTAG
Protein sequenceShow/hide protein sequence
MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGEGAGDVEAGMGEERRLRRPEKLPPTVRFGSEKMVRRRSEEEC
AICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA