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Cla97C01G011205 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C01G011205
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionLEA_2 domain-containing protein
Genome locationCla97Chr01:18304583..18308599
RNA-Seq ExpressionCla97C01G011205
SyntenyCla97C01G011205
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2674349.1 hypothetical protein I3760_13G129800 [Carya illinoinensis]3.3e-2544.9Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA
        NFS+A+ SL  +W V FSV NPNKKL+IS++ + +S++YK   I+  ++  F L +RN T +   F   D+ V   V+NDI GD A G ++FNV+V  + 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA

Query:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL
        +F+ G WR R  + RVLC  L++GL S  S   GSG LVGG R C++
Subjt:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL

XP_008463664.1 PREDICTED: uncharacterized protein LOC103501757 [Cucumis melo]4.6e-5173.47Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAE
        NFS+AA +   SW+VGFS+NNPNKKLAISFQNL+SSIYYKDNIIAQARI RFLL  RNST +V PFI  S VDESVLNDI GDLA G INF VVVLGYA 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAE

Query:  FQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQLR
        FQI +W+WRG N +V+CSDLSVG   P S  G SGQLVGGS+QCQL+
Subjt:  FQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQLR

XP_018857049.1 uncharacterized protein At1g08160-like [Juglans regia]7.9e-2747.62Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA
        NFS+A+ SL  +W V FSV NPNKKL+IS++ + SS++YK   I+  R+  F L +RN T +   F   D+ VD  V+NDI GD A G ++FNV+V  + 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA

Query:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL
        +F+ G WR R  + RVLC  L+VGL S  S   GSG LVGG+R C++
Subjt:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL

XP_040991250.1 uncharacterized protein At1g08160-like [Juglans microcarpa x Juglans regia]2.0e-2546.26Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA
        NFS+A+ +L  +W V FSV NPNKKL+IS++ + SS++YK   I+  R+  F L +RN T +   F   D+ VD  V+NDI  D A G ++FNV+V  + 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA

Query:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL
        +F+ G WR R  + RVLC  L+VGL S  S   GSG LVGG+R C++
Subjt:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL

XP_042956465.1 uncharacterized protein At1g08160 [Carya illinoinensis]2.5e-2545.58Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA
        NFS+A+ SL  +W V FSV NPNKKL+IS++ + +S++YK   I+  ++  F L +RN T +   F   D+ V   V+NDI GD A G ++FNV+V  + 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA

Query:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL
        +F+ G WR R  + RVLC  L+VGL S  S   GSG LVGG R C++
Subjt:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL

TrEMBL top hitse value%identityAlignment
A0A0A0LT76 LEA_2 domain-containing protein1.4e-4570.55Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAE
        NFSA A +   SWVVGFS+NNPNKKLAISF+NLESSIYYKDNIIAQAR  RFLL  RNST +V+PFI D  VDESVLNDI GDL  G I+F VVVLGYA 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAE

Query:  FQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL
         +IGVWR  G + RV+CSDLSV    P    G SGQLVGGSRQC L
Subjt:  FQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL

A0A1S3CJS5 uncharacterized protein LOC1035017572.2e-5173.47Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAE
        NFS+AA +   SW+VGFS+NNPNKKLAISFQNL+SSIYYKDNIIAQARI RFLL  RNST +V PFI  S VDESVLNDI GDLA G INF VVVLGYA 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAE

Query:  FQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQLR
        FQI +W+WRG N +V+CSDLSVG   P S  G SGQLVGGS+QCQL+
Subjt:  FQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQLR

A0A2I4HLK5 uncharacterized protein At1g08160-like3.8e-2747.62Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA
        NFS+A+ SL  +W V FSV NPNKKL+IS++ + SS++YK   I+  R+  F L +RN T +   F   D+ VD  V+NDI GD A G ++FNV+V  + 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPF-ITDSPVDESVLNDIKGDLACGAINFNVVVLGYA

Query:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL
        +F+ G WR R  + RVLC  L+VGL S  S   GSG LVGG+R C++
Subjt:  EFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL

A0A5D3E5N0 Protein YLS9 isoform X22.2e-5173.47Show/hide
Query:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAE
        NFS+AA +   SW+VGFS+NNPNKKLAISFQNL+SSIYYKDNIIAQARI RFLL  RNST +V PFI  S VDESVLNDI GDLA G INF VVVLGYA 
Subjt:  NFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAE

Query:  FQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQLR
        FQI +W+WRG N +V+CSDLSVG   P S  G SGQLVGGS+QCQL+
Subjt:  FQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQLR

A0A6J1K154 NDR1/HIN1-like protein 21.2e-2343.05Show/hide
Query:  FNSPNFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFIT-DSPVDESVLNDIKGDLACGAINFNVVV
        F   NFSAA+ SL ++W VGFSV NPNKK++IS+  ++S+++YK+ I+++ R+  F+  +R  T V   F + ++ +D S +NDI  D   GA+ F+V +
Subjt:  FNSPNFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFIT-DSPVDESVLNDIKGDLACGAINFNVVV

Query:  LGYAEFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL
             F+ G WR R    RVLC DLSVGL   LS    SG+L+G SR C++
Subjt:  LGYAEFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQL

SwissProt top hitse value%identityAlignment
Q9SRN1 NDR1/HIN1-like protein 24.4e-0424.39Show/hide
Query:  VGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPV--DESVLNDIKGDLACGAINFNVVVLGYAEFQ---IGVWRWR
        + F++ NPN+++ + +     S YY D     A +  F    +N+T ++T     + V   +    D+K D   G    N  +     F+   I  W+ +
Subjt:  VGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPV--DESVLNDIKGDLACGAINFNVVVLGYAEFQ---IGVWRWR

Query:  GNNFRVLCSDLSVGLLSPLSPGG
            ++ C DL + L S  S GG
Subjt:  GNNFRVLCSDLSVGLLSPLSPGG

Arabidopsis top hitse value%identityAlignment
AT3G11650.1 NDR1/HIN1-like 23.1e-0524.39Show/hide
Query:  VGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPV--DESVLNDIKGDLACGAINFNVVVLGYAEFQ---IGVWRWR
        + F++ NPN+++ + +     S YY D     A +  F    +N+T ++T     + V   +    D+K D   G    N  +     F+   I  W+ +
Subjt:  VGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPV--DESVLNDIKGDLACGAINFNVVVLGYAEFQ---IGVWRWR

Query:  GNNFRVLCSDLSVGLLSPLSPGG
            ++ C DL + L S  S GG
Subjt:  GNNFRVLCSDLSVGLLSPLSPGG

AT4G05220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.4e-0522.41Show/hide
Query:  PSLISSWVVGFSVN--NPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDS--PVDESVLNDIKGDLACGAINFNVVVLGYAEFQ
        P+ + +  + F+V   NPN+ + + F ++E SIYYKD  +    +      +  +T +VT  +T +   V+ +   +   D A G + F + ++    F+
Subjt:  PSLISSWVVGFSVN--NPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDS--PVDESVLNDIKGDLACGAINFNVVVLGYAEFQ

Query:  IGVWRWRGNNFRVLCS
        +  W  + +     C+
Subjt:  IGVWRWRGNNFRVLCS

AT4G26820.1 unknown protein7.7e-0422.39Show/hide
Query:  STHFNSPNFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLAC--GAINF
        + H  S + S A  +L   W   FS+ NPN+KL ++++N    + ++  +++ AR   F         V+        +DE    +++ ++A   G +  
Subjt:  STHFNSPNFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLAC--GAINF

Query:  NVVVLGYAEFQIGVWR-WRGNNFRVLCSDLSVGL
        ++V  G   F  G    W       +C ++S  L
Subjt:  NVVVLGYAEFQIGVWR-WRGNNFRVLCSDLSVGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGAAAATCGACTTCCAAATTCTATATATCTCGTGCCATGGCTAACTCCTCCATCGGCGGCTGGCCGACGCATCCTCAACCCCAAACCCATCCCCATCGCCACAAC
TCCTCGCCGTGCCTCCGAGCCTTCGCCGCCGGCATGGTTCTCCTCCTTTCCATCGCTCTCATCATCTACACCGTCCAATATTTCATCTTCCGCCCCATCCTCCCTATTCT
CCGGGTCGACACACTTCAACTCGCCAAATTTCTCTGCCGCCGCCCCGTCCCTTATCTCCTCATGGGTCGTTGGATTTTCCGTCAACAACCCCAACAAGAAGCTCGCCATC
TCATTCCAAAACCTTGAGTCCTCCATTTACTACAAAGATAACATTATCGCTCAAGCCCGAATTCACCGCTTCCTCCTCCACCGAAGGAACTCGACGGCCGTTGTCACTCC
CTTCATCACCGACTCGCCCGTCGATGAGTCGGTTTTGAACGACATTAAAGGAGACTTAGCGTGTGGAGCAATTAATTTCAATGTTGTAGTTCTTGGCTATGCCGAGTTCC
AAATCGGTGTGTGGCGGTGGAGGGGCAACAATTTTCGGGTTCTTTGCAGCGATTTGTCTGTCGGATTGTTGTCGCCGCTGAGTCCCGGCGGCGGGTCCGGCCAGTTGGTT
GGTGGCTCAAGGCAATGCCAGCTACGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGAAAATCGACTTCCAAATTCTATATATCTCGTGCCATGGCTAACTCCTCCATCGGCGGCTGGCCGACGCATCCTCAACCCCAAACCCATCCCCATCGCCACAAC
TCCTCGCCGTGCCTCCGAGCCTTCGCCGCCGGCATGGTTCTCCTCCTTTCCATCGCTCTCATCATCTACACCGTCCAATATTTCATCTTCCGCCCCATCCTCCCTATTCT
CCGGGTCGACACACTTCAACTCGCCAAATTTCTCTGCCGCCGCCCCGTCCCTTATCTCCTCATGGGTCGTTGGATTTTCCGTCAACAACCCCAACAAGAAGCTCGCCATC
TCATTCCAAAACCTTGAGTCCTCCATTTACTACAAAGATAACATTATCGCTCAAGCCCGAATTCACCGCTTCCTCCTCCACCGAAGGAACTCGACGGCCGTTGTCACTCC
CTTCATCACCGACTCGCCCGTCGATGAGTCGGTTTTGAACGACATTAAAGGAGACTTAGCGTGTGGAGCAATTAATTTCAATGTTGTAGTTCTTGGCTATGCCGAGTTCC
AAATCGGTGTGTGGCGGTGGAGGGGCAACAATTTTCGGGTTCTTTGCAGCGATTTGTCTGTCGGATTGTTGTCGCCGCTGAGTCCCGGCGGCGGGTCCGGCCAGTTGGTT
GGTGGCTCAAGGCAATGCCAGCTACGATGA
Protein sequenceShow/hide protein sequence
MIENRLPNSIYLVPWLTPPSAAGRRILNPKPIPIATTPRRASEPSPPAWFSSFPSLSSSTPSNISSSAPSSLFSGSTHFNSPNFSAAAPSLISSWVVGFSVNNPNKKLAI
SFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAEFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLV
GGSRQCQLR