CuGenDBv2

Gene ID	Cla97C02G030030
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Protein Ycf2
Genome location	Cla97Chr02:3147325..3148044
RNA-Seq Expression	Cla97C02G030030
Synteny	Cla97C02G030030
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR008543 - Uncharacterised protein family Ycf2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QZL38725.1 Ycf2 protein [Citrullus ecirrhosus]

3.7e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

YP_009317429.1 Ycf2 [Coccinia grandis]

3.7e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

YP_009326033.1 Ycf2 [Citrullus lanatus]

3.7e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

YP_009420838.1 Ycf2 [Citrullus colocynthis]

3.7e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]

3.7e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LED5 Protein Ycf2

1.8e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

A0A249RXF2 Protein Ycf2

1.8e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

A0A343F2F1 Protein Ycf2

1.8e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

A0A7G9IT80 Protein Ycf2

1.8e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

A0A7T3QNV9 Uncharacterized protein

1.8e-50

75.17

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

SwissProt top hits

e value

%identity

Alignment

Q0ZIV6 Protein Ycf2

4.9e-45

67.76

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV
        MKYTINQHLSNLKK QKKWFDPLI ISRTERSMNRDP+AYRYKWSNGSKNFQ   EHF+SEQKS   FQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF 
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV

Query:  LSKNQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
        LSK+ +FL      L  +      + G    H S    ++LK PN+    QL
Subjt:  LSKNQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

Q14F97 Protein Ycf2

5.7e-46

67.79

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSNLK+ QKKWFDPLI +SRTERSMN DPN+YRYKWSNGS NFQEHFISEQKS F FQVVFDRLRINQYSIDWSEVIDKK+LSKSL F LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          +FL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

Q2L949 Protein Ycf2

1.3e-45

69.08

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV
        MKYTINQHLSNLKK QKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ   EHF+SEQKS   FQVVFDRLRINQYSIDWSEVIDKK+LSKSLRF 
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV

Query:  LSKNQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
        LSK  +FL      L  +      + G    H S    ++LK PN+    QL
Subjt:  LSKNQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

Q2QD30 Protein Ycf2

7.0e-52

73.83

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK
        MKYTINQHLSN KKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKK+ SKSLRF LSK
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSK

Query:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
          VFL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  NQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

Q49KT6 Protein Ycf2

3.7e-45

67.76

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV
        MKYTINQHLSNLKK QKKWF+PLI ISRTERS+NRDPNAYRYKWSNGSKNFQ   EHF+S+QKS   FQVVFDRLRINQYSIDWSEVIDKK+LSKSLRFV
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV

Query:  LSKNQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL
        LSK  +FL  F   L  +      + G    H S    ++LK PN+    QL
Subjt:  LSKNQVFL--FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLK-PNNHHARQL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

1.1e-41

82.52

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Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV
        MK TINQHLSNLKK QKKWFDPLI +S+TERS+NRDPNAYRYKWSNGSKNFQ   EHF+SE+KS   FQVVFD+L INQYSIDWSEVIDKK+LSKSLRF 
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV

Query:  LSK
        LSK
Subjt:  LSK

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

1.1e-41

82.52

Show/hide

Query:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV
        MK TINQHLSNLKK QKKWFDPLI +S+TERS+NRDPNAYRYKWSNGSKNFQ   EHF+SE+KS   FQVVFD+L INQYSIDWSEVIDKK+LSKSLRF 
Subjt:  MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQ---EHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFV

Query:  LSK
        LSK
Subjt:  LSK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAATATACGATCAACCAACATTTATCAAATTTGAAAAAGGGTCAGAAGAAATGGTTCGATCCTCTTATTTTGATTTCTCGAACCGAGAGATCCATGAATCGG
GATCCTAATGCATATAGATACAAATGGTCCAATGGGAGCAAGAATTTCCAGGAACATTTCATTTCTGAGCAGAAGAGCCATTTTCATTTTCAAGTAGTGTTCGAT
CGATTACGTATTAATCAATATTCGATTGATTGGTCTGAGGTCATCGATAAAAAAAATTTGTCTAAGTCACTTCGTTTCGTTTTGTCCAAAAACCAAGTTTTCCTC
TTCTTTTGCCAGTTAAAGCGAGCTGCAGTTGGCGTGGCCTACAATGGCGGAAAATGGCGACGCCATAATTCTTCGACCCCACCATTCAAATTGAAACCAAACAAC
CATCATGCACGGCAGTTGACTTTGAACAAAAGACAGATTTTCAATCTGTTGTCATCTTCTTCAGTCCCCACCAAATTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKYTINQHLSNLKKGQKKWFDPLILISRTERSMNRDPNAYRYKWSNGSKNFQEHFISEQKSHFHFQVVFDRLRINQYSIDWSEVIDKKNLSKSLRFVLSKNQVFL
FFCQLKRAAVGVAYNGGKWRRHNSSTPPFKLKPNNHHARQLTLNKRQIFNLLSSSSVPTKF

Cla97C02G030030 (gene) of Watermelon (97103) v2.5 genome