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Cla97C02G035785 (gene) of Watermelon (97103) v2.5 genome

Gene IDCla97C02G035785
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
Genome locationCla97Chr02:13241876..13244313
RNA-Seq ExpressionCla97C02G035785
SyntenyCla97C02G035785
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_025877173.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group]4.8e-0439.53Show/hide
Query:  NASMGCLRSYVEGICL-LPWVNGVSFLPLIVESDCTNLVNLISHESCDLSELSNLVEEIVSMSEAALVVFFSWCPRSANGAAHRLA
        NA    +R+ +EG+ L L W    +  P+++E+DC +LVNL+   + DLSEL+NLV+EI  +      V  +   RS NG +H LA
Subjt:  NASMGCLRSYVEGICL-LPWVNGVSFLPLIVESDCTNLVNLISHESCDLSELSNLVEEIVSMSEAALVVFFSWCPRSANGAAHRLA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAATGTCTTGAGCTTGCCGGGATGGAATTCTTCCGAGAGGTTCAACAACCTTTTAGCCTTCAGGTCTGCCCTTTTATAGATGTTGCGTTGCAATCGCTGGT
AAATTTGCATGATTTGAGGCTAAATTTCTGCCTTGCGTCCATCTCGCCTAATCGCATCAAGTATATCAATCTCCCGACAATCTCTCAAGATTCTTATCTGATTCTCTGCT
ACCTTGCATTTCTGCTTGATATGCGTCCATGGAAAACTTGGGTTCCTGCGTTCAAGTATGCCAACGCATCCATGGGTTGTTTGCGTTCCTACGTTGAAGGGATCTGCCTT
TTGCCTTGGGTTAATGGTGTTTCTTTTCTTCCTTTGATTGTGGAATCAGACTGTACTAATCTTGTTAACCTCATTAGTCATGAGAGTTGCGATTTATCTGAGTTGAGTAA
TTTGGTAGAGGAGATTGTCTCTATGTCTGAGGCTGCCCTGGTTGTGTTCTTCTCTTGGTGTCCTAGATCGGCGAATGGGGCGGCGCACCGTCTGGCTTGTGCGGAAGTGT
CTTTTGGTAGTTTTGAAATTAGTTTTGTAAAACTCTCTTCTTCTTGCTCAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCAATGTCTTGAGCTTGCCGGGATGGAATTCTTCCGAGAGGTTCAACAACCTTTTAGCCTTCAGGTCTGCCCTTTTATAGATGTTGCGTTGCAATCGCTGGT
AAATTTGCATGATTTGAGGCTAAATTTCTGCCTTGCGTCCATCTCGCCTAATCGCATCAAGTATATCAATCTCCCGACAATCTCTCAAGATTCTTATCTGATTCTCTGCT
ACCTTGCATTTCTGCTTGATATGCGTCCATGGAAAACTTGGGTTCCTGCGTTCAAGTATGCCAACGCATCCATGGGTTGTTTGCGTTCCTACGTTGAAGGGATCTGCCTT
TTGCCTTGGGTTAATGGTGTTTCTTTTCTTCCTTTGATTGTGGAATCAGACTGTACTAATCTTGTTAACCTCATTAGTCATGAGAGTTGCGATTTATCTGAGTTGAGTAA
TTTGGTAGAGGAGATTGTCTCTATGTCTGAGGCTGCCCTGGTTGTGTTCTTCTCTTGGTGTCCTAGATCGGCGAATGGGGCGGCGCACCGTCTGGCTTGTGCGGAAGTGT
CTTTTGGTAGTTTTGAAATTAGTTTTGTAAAACTCTCTTCTTCTTGCTCAAGTTGA
Protein sequenceShow/hide protein sequence
MASQCLELAGMEFFREVQQPFSLQVCPFIDVALQSLVNLHDLRLNFCLASISPNRIKYINLPTISQDSYLILCYLAFLLDMRPWKTWVPAFKYANASMGCLRSYVEGICL
LPWVNGVSFLPLIVESDCTNLVNLISHESCDLSELSNLVEEIVSMSEAALVVFFSWCPRSANGAAHRLACAEVSFGSFEISFVKLSSSCSS