CuGenDBv2

Gene ID	Cla97C02G036437
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Gag/pol protein
Genome location	Cla97Chr02:19901477..19904859
RNA-Seq Expression	Cla97C02G036437
Synteny	Cla97C02G036437
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

7.4e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]

7.4e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]

7.4e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

7.4e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

7.4e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

3.6e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

A0A5A7TU93 Gag/pol protein

3.6e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

A0A5A7TWB9 Gag/pol protein

3.6e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

A0A5A7V4M1 Gag/pol protein

3.6e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

A0A5D3CPJ6 Gag/pol protein

3.6e-45

74.63

Show/hide

Query:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV
        L SLSEVLAKKHE+M+TAREIMDSLQE+FGQ S QIKHD LK+IYNA MNE +SV+EHVLNMMVHFNVAE+NG +I+EASQ+SFI+E L ESFLQFR+N 
Subjt:  LPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERL-ESFLQFRTNV

Query:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV
        VMNK+ Y+LTTLLNELQ +ES+ K +GQ G+ NV
Subjt:  VMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAAAAAAACTCATAACTCTGCAACTAGGCATGGAGAGGAGGAGGAAGAAGAAGAAGAATCAGGTCTAATATTTGGAAAACCACGAGCTGTAGAGATCGAGTTAAGCGC
TGAAACTTTAAGGTACTCAATGCTGAAGAATATTGACAAGGCATTTGAGTATCCTAAGGACCCAGCACTGAAGGACTCGGAGAAGCGAAAGAGTTCCCAGTGCTTAGCCT
ACCCAAGCCTCATCCTGCTGAAGTTTCAAGCTGTCAACAAATACCTTTCCTTCATAGTTGTTGTACGTGTAAATAATCTTAAGTTAGTCAAGTACGGATGGACAGTGAAC
CTCACAAAAGGGGTGAAGTTTGCTGCCTTCACATCTCTTCCCAGCTTATCTGAAGTTTTGGCAAAGAAGCATGAAACCATGGTCACTGCTCGTGAAATCATGGATTCATT
GCAAGAGATATTTGGACAACCATCCTCACAAATCAAACATGATACTCTGAAATTCATTTATAATGCACATATGAACGAGGAGTCATCAGTGCAAGAACATGTTCTCAACA
TGATGGTCCACTTCAATGTGGCTGAAATTAATGGGGTCATTATCAATGAGGCTAGTCAAATTAGTTTTATTATGGAGAGACTTGAGAGTTTCCTTCAGTTCAGGACAAAT
GTTGTTATGAACAAACTGACCTACTCTCTTACTACCCTCCTTAACGAGCTACAAATATATGAGTCCATGCATAAAGGCGAAGGACAAGATGGGAAGACAAATGTTCCTCT
AAGAAGTTCCACAGAAGTTTGA

mRNA sequence

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Protein sequence

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MKKTHNSATRHGEEEEEEEESGLIFGKPRAVEIELSAETLRYSMLKNIDKAFEYPKDPALKDSEKRKSSQCLAYPSLILLKFQAVNKYLSFIVVVRVNNLKLVKYGWTVN
LTKGVKFAAFTSLPSLSEVLAKKHETMVTAREIMDSLQEIFGQPSSQIKHDTLKFIYNAHMNEESSVQEHVLNMMVHFNVAEINGVIINEASQISFIMERLESFLQFRTN
VVMNKLTYSLTTLLNELQIYESMHKGEGQDGKTNVPLRSSTEV

Cla97C02G036437 (gene) of Watermelon (97103) v2.5 genome